KEGG   Anoplopoma fimbria (sablefish): 129102286
Entry
129102286         CDS       T09102                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afb03400]
    129102286 (helq)
Enzymes [BR:afb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     129102286 (helq)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    129102286 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DNA_pol_lambd_f CggR_N DUF7898 DUF4332 HemN_C
Other DBs
NCBI-GeneID: 129102286
NCBI-ProteinID: XP_054468330
LinkDB
Position
14
AA seq 955 aa
MAEGRVQYCSDSEDLFGDYDSLLEDSSLLAKLDDAEQNERLRDVQRSAADHLDFTALRPK
ASAEDVLTDSLMDVLGDEPFEDLPTSQRQFQEQVDGSAKRSRLQDGDKTSTPFRDVEDRT
RSRARRSVTEAMKRTMLCNAAAPSTVSRSVVLKEAVVSEEISVAMQAMERVSADTTDLGP
FFGLPSRVKELMFRLRGIEDLYDWQKTCLNLDCVQQRKNLIYSLPTSGGKTLVAEILVLR
ELLCRRKDCLFILPYISLVQEKVRGLASLGLELDFMVEEYAGSKGRFPPVKRRTNRSVYV
ATIEKAHSLVNSLIENGRIDDLGLVVVDELHMLGDGSRGAIIEMTLAKVLYMTKSTQIIG
MSATLGNIKDLQTFLRAENYTNDFRPVQLKEYVKLNDTIYEVDPKEEECFKFSRLLNFKY
SSSMKKMDPDHIIALVTEVIPTHSCLIFCPTKKNCENVVGMICKYLKEEFLQLRREEKAL
LLRELRSSGNGSVCPVLRRTVPYGLAYHHSGLTSEERKLVEEAYSNGVLCLLTCTSTLAA
GINLPARRVILRSPYVAADFLKRSQYKQMVGRAGRAGIDSVGESVLILQDKDRNTAKTLV
CAPMENCYSNLLHDEGKGLLSLILSLIGLKVTSSVDQVTDFLCGTLLSVQQKQLCVETSL
TEVVQQCVDLLKDKDLITLTEHGLQVTKLGRATYKGSVDLTYSGVLYRDLSKGLEGLLLN
SVLHLVYLVTPYDMISQCRPDWMVYFRQFTLLSAAEQKMSASVGVPESFIARKAAGQTVR
KTVNMEVVGRMYLALVLLSLLKETSLWSVADRFQLSRGFIQSLLSSSSAFCSCVLHFTEE
LEEFWPFRALLTELTRRLSYCVTAELIPLMEVAGVMESRAKQLYNAGYKTLTHLANADAA
VLSTTIENLFRKRANQIVASAKMLLKEKAAALQEEVDELLMKPSDLPTAETQPLV
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggctgaaggacgagtccagtactgcagtgacagtgaggacctgtttggggactacgac
agcctcctggaggacagctctctgctggcgaagctggacgatgccgagcagaacgaaagg
ctcagagacgtccagcgttcagcggcggatcatctggacttcaccgccctgagacccaaa
gcgtccgccgaagacgtcctcacagactccctcatggacgtcctcggagacgaacccttt
gaggacttaccgaccagccagcggcagttccaggagcaagtggacgggtctgcgaagagg
agccgactgcaggacggagacaaaacctcgactcccttcagagacgtggaggatagaacc
cggagcagagcgaggaggagcgtgacggaggcgatgaagaggacgatgctctgtaacgcg
gcggcgccctccaccgtgtcacgcagcgtcgtgttgaaggaggccgtcgtctccgaggag
atcagcgtcgccatgcaggccatggagcgcgtcagtgccgacaccacggacctcgggccg
ttctttggactcccctccagagtgaaggagctgatgttcagactgagagggatcgaggat
ttatacgactggcagaagacgtgtctgaacctggactgtgtccagcagaggaagaacctg
atctactctcttcccaccagcggagggaaaactcttgttgcagagatcctcgtcctcaga
gagctgctgtgcaggaggaaagactgtctgttcatcttaccgtacatatcgctggtgcag
gagaaggtacgtgggttagcgagcttgggcctggagctggacttcatggtggaggagtac
gctggcagtaaaggcaggtttcctcccgtgaagaggagaaccaatagatcagtgtacgtc
gctacgatagagaaagcccacagcctcgtcaactccctgatcgagaacggcaggatcgac
gacctcggactggtggtggttgatgagcttcacatgctgggcgacggcagcagaggagcc
attattgaaatgacgctggccaaagttctctacatgaccaaaagtactcagattatcgga
atgagcgccactctgggaaacatcaaagacctgcagacgttcttaagggcggaaaattac
acaaacgacttcaggcctgtgcagctgaaggagtacgttaaactgaacgacaccatatat
gaagtcgacccaaaggaagaggaatgttttaaattctctcgtcttctcaactttaagtac
tccagctccatgaagaagatggatccagatcacatcatcgctctggtgactgaagtcatt
ccaacacattcctgtctgatcttctgtccaaccaagaagaactgtgagaacgttgtgggg
atgatctgcaaatacctaaaagaggagttcctgcagctccggcgggaggagaaagcgctc
ctcctcagggagctgaggtccagcgggaacggctcggtgtgtccggtgctcaggaggacg
gtgccgtacggtttggcctatcaccacagcggactgacctccgaggagaggaagctggtg
gaggaggcctactccaacggggtgctctgcctcctcacctgcacctccacgctggctgca
gggatcaacctaccggcccgcagagtgatccttcgctcgccgtacgtggctgcagacttc
ctgaagaggagtcagtacaaacagatggttggacgagccggtcgggccgggatcgactct
gtgggagagagcgtcctcatcctgcaggacaaggacaggaacacggctaaaaccctggtt
tgtgctccgatggagaactgttacagtaacctgctgcatgacgaaggaaaaggcctcctg
agtctcatcctgtcgctcatcggattaaaggtcacctcgtcggtggatcaggtgacggac
ttcctgtgtgggacgctgctgtccgtccagcagaagcagctgtgtgtggagacgagtctg
acggaggtggtgcagcagtgtgtggacctcctgaaggacaaagacctcatcacgctcacg
gaacacggtctgcaggtcaccaagctgggaagagcgacctataaaggctccgtggatctg
acctacagtggcgttctgtacagagacctctctaaaggtctggagggtctgctgctcaac
agcgtcctccacctggtctacctggtcacaccatacgacatgatctcacagtgcagaccg
gactggatggtgtacttcagacagttcactctgctgtcggctgcagagcagaagatgtct
gcgtccgtcggagtgccggagagtttcatcgctagaaaagctgcaggacagacggtgaga
aagactgtgaacatggaggtggtggggcggatgtatctggctctggttctgctctctctg
ctgaaggagaccagcttgtggagcgttgccgacaggttccagctgagccgaggcttcatc
cagagtttgctgagctcctcctcggccttctgctcctgtgtgctgcacttcaccgaggag
ctggaggagttctggccgttcagagctctgctgacggagctgacccgaaggctgagctac
tgtgtgacggctgaactcatccctctgatggaggtggccggagtcatggagtcccgagcg
aagcagctctataacgccggctacaaaacgctgactcacctggccaacgccgacgcggcc
gttctctccaccaccatagaaaacctgttcaggaaacgggccaatcagatcgtggcctcg
gccaaaatgctgctgaaggagaaagctgcagctctccaggaggaggtggacgagctgctg
atgaagccttcagacctgcccacggctgaaacacagccactcgtctga

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