KEGG   Anoplopoma fimbria (sablefish): 129102367
Entry
129102367         CDS       T09102                                 
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
  KO
K06247  laminin, gamma 3
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04510  Focal adhesion
afb04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:afb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129102367 (lamc3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129102367 (lamc3)
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B
Other DBs
NCBI-GeneID: 129102367
NCBI-ProteinID: XP_054468459
LinkDB
Position
14:5712492..5807023
AA seq 1635 aa
METSFAVSSLLLALLLSLHLQCNLLVGAAMDSCFDEEGAQSRCMPKFENVAFNRTVVASN
VCGVPPEDYCMQTGSTRSCHRCDASDPDQSHNASLLTDFHRNEEPTWWQSQSMYYGIQHP
SSVNITLNLGKAFEITYIRLKFYTSRPESFAIYKRTAEDGPWLPYQFYSASCEKTYGKDA
NAYIRPGDDERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSLVLKEWVTATDLL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVELDQRGLVCSCQHH
TVGDDCQRCHPFYQDRPWARATGDSANECLKCNCSGRSDECVFDMEQYRSTGSGGRCVSC
RDNTDGPHCERCREDHYRNSDEEPCLPCNCNSNGSVSLQCDVEGRCACRDGVTGEKCDTC
RAGFHSLGPGGCRPCECDPSGSVDVCSPLDGRCYCKANVEGHSCDRCKPGSFNLQQDNLA
GCQACFCFGHSLACSSSDHHAAVSITSDFIEDQDGWLGEFSGGQLYPLLWKEGEVYLLPL
TEEDIGFYKAPEKFLGHQVLSYGQLLSITFTSETAELLPYHVTLLLQGSGVTLSADLSPQ
PVLDHDPGLTSRRSFVVRLHENEVRFKPLLSAFKFQQLLYNLTAFRISNAGGQNYTSQLA
GVTLTSAFISSGPAAPPAPWVESCSCPPGFVGQFCERCAPGFTREDSGRGPLSTCVPCNC
HQHGTCHPETGVCECSDFTTGMTCKRCLDGYYGNALIGTPADCQPCPCPGRTSCAEIAEK
RQVVCTNCPAGQTGMRCQMCEDGYYGDPLGQSGAVRPCTRCDCNGNVDFNALGICDHMTG
RCLKCLRHTEGDQCQRCQRGFYGDALNQTAGQKCKQCSCHQGGTSGHVNECHPQSGDCQC
LGHVTGRDCSNCEVGFFNLQPGVGCERCKCNPIGSSSIACHPITGHCVCRAGVDGRLCDS
CRAGFFGFSSRGCRACNCDPMGSISMQCHGNGTCHCRQGFVGYKCDKCEMNYFHNRATHQ
CEECPVCYGLVKKQAEKMKTRLQDLEKLLAHFDCRGRFGKQQHLLKYHMARLYEHEHQRE
DSLPNALEDFLAFQEAREAFIKQFSLLEASTGTLLAQLHGITSTLNCSISMTEEEGKERR
KDEGSKAVCQTFTETTFMVRASQKQLKQATLDLDNMIIPFEVVSEPNKWNVLVNDSQALM
KSHRETADHIEAIASKAARASEQTFAFLMDLLQDNSTEEYIRNLTEQITQMQQQKVNLRA
RVNETVAKQLALEEEAAGLKLALGNITSSLHQLALTDASPSPEHDQTRLNQTRPTNRTTE
DLLKQKEEMDQQIQTKDKLISKITEEMEPLKQTASKKLEEAYDIRELQAHIQGVKVTALS
SVVAGKEVESDAIALHRELDYMVREWPRRQSQTRAAIKKERPLEGKVLADVRKKVSQIEK
MLKPVLENSSLSRNTTKEAERTAHAVAKESKAILTQAKHTRTASAHLSSHIDSALQQLAK
QEMLTDTVNSQITSEPEVSLTSVMEDMEAAKLQLKAYSVTLTELISKIDVNVPLERYDRI
LDETARRLSMLRGSVESPTLGSKIQKLQSAAKEQHSRMSFIEQDLQEIREERDSLRDIAL
NLPRSCPEATGAGKG
NT seq 4908 nt   +upstreamnt  +downstreamnt
atggaaacatcctttgctgtgagctctcttctcctggccctgctcctctctctccatctg
caatgcaacctccttgttggggccgcaatggactcctgctttgatgaggagggcgcccag
agccgttgcatgcctaagtttgagaacgtggccttcaatcgtactgtggtggcatccaac
gtgtgtggcgtcccacctgaggactactgcatgcagaccggctccacgcgctcatgccac
cgctgcgacgcctcagatccagaccagagccacaatgccagcctcctgacagacttccac
aggaatgaggagcccacatggtggcagagccagtccatgtactatggtatccagcacccc
agttctgtcaacatcaccctaaacctggggaaggcttttgagataacctatatacgattg
aaattctacaccagtcggccggagagcttcgccatctacaagcgcacggcagaagatggg
ccctggttgccttaccagttctacagcgcctcttgtgagaagacctacgggaaggatgcc
aatgcctacattcgcccaggagatgatgagaggaccgcgttatgtacggatgagttcagt
gacatctctcccctcactggaggaaacgtggccttctccaccctggagggacggcccagt
gcatacaactttgaccaaagcttggtgttgaaggaatgggtgacagccactgacctgctc
atctctttggacaggcttaacacctttggagacgagttcttcaaggacgctaaagtgttg
cgctcgtacttctatgccatctctgatttctctgtgggcggcagatgtaagtgtaacggt
cacgccagcgagtgcgttgagttggaccagcggggcctggtgtgttcttgccaacatcac
acggtgggagacgactgccagagatgtcaccccttctaccaagacagaccctgggccagg
gccactggggactctgccaacgagtgtctgaagtgtaactgcagtgggaggtcggacgag
tgcgtgtttgacatggagcagtaccggagcactggcagcgggggtcgctgtgtgagctgc
agagacaacactgatgggccccattgtgagcgctgcagagaggaccactacaggaattct
gatgaagagccctgcctgccatgcaactgcaatagtaatggttcagtgagtctgcagtgt
gatgtagaaggaaggtgtgcgtgtcgagatggcgtgacaggggagaagtgtgacacatgt
cgggctggctttcactcgcttggccctggcggctgcaggccgtgcgagtgtgaccccagc
ggcagcgtggacgtctgctctcctctggatggacgttgctactgtaaggccaacgtggag
gggcacagctgtgacagatgcaaaccaggctctttcaacctacaacaagacaacctagca
ggatgccaggcgtgtttctgcttcggacactctctggcctgctcctcgtccgatcaccac
gccgctgtcagcatcacttctgacttcattgaagatcaggacggctggttgggagagttc
tccggagggcagttgtaccccctgctgtggaaggaaggtgaagtctacctgcttcctctt
accgaggaagacatcggcttctacaaagcccccgagaaattcctgggtcatcaagtcctc
agctacggccagctcctctccatcaccttcacctccgagaccgccgagctgctcccctac
cacgtcaccttgctcctccaaggctctggagtcaccctatctgccgacctttcaccccag
ccggtgcttgaccatgaccccggcctcacatcgcggcgctccttcgttgtcaggcttcat
gaaaatgaggtgagattcaaacctctgttgtctgcctttaagttccaacaacttctttac
aacctgacagctttcagaatcagcaacgccggaggacagaactacacgtcgcagctcgcg
ggggtaaccctgacctcggctttcatctcctccggtccagccgcccctcccgccccgtgg
gtggagtcttgttcctgtcccccggggtttgtaggccagttttgcgagcgctgtgccccg
ggattcacccgggaggactccggcagagggcctctctcaacatgtgtgccatgcaactgc
caccagcatggaacatgtcatccagagacgggtgtgtgtgagtgctctgacttcaccact
gggatgacctgcaagcgctgcctggatggttactatggcaacgctttgattggcacgccc
gctgattgtcagccttgcccttgcccaggccgtaccagctgtgccgaaattgcagagaaa
agacaggtggtctgtaccaactgccctgcaggacagacagggatgcgatgtcagatgtgt
gaagatggttactatggtgaccccctgggacaatctggtgcagttcgaccgtgtaccaga
tgcgactgcaatggcaacgtggacttcaacgcgttgggaatatgcgaccacatgactggg
cgatgtctgaaatgcctgagacacacagagggcgaccagtgccaacgctgccagcggggt
ttctacggcgacgccctgaaccagacagctggccagaagtgcaagcagtgcagctgccat
caaggcggaacctctgggcatgtaaatgaatgccatcctcagtctggagattgccagtgc
cttggtcatgtgaccggacgggactgcagtaattgtgaagttggcttcttcaacctccaa
ccaggcgtaggatgtgagaggtgcaagtgtaacccgattggctcatcctccatcgcgtgc
catccaatcacagggcactgcgtgtgtcgagcaggagtggacgggaggctgtgtgattct
tgccgtgcaggcttctttggattctcgtcacgaggttgcagagcctgtaactgtgaccca
atgggttccatttcaatgcagtgtcacggtaatggtacctgccactgccgccagggcttt
gtgggttataagtgtgacaaatgtgagatgaactacttccacaacagggccacacaccag
tgtgaggaatgcccagtttgctatggccttgtcaagaaacaggcagaaaagatgaagact
cgcctgcaggatttggagaagctgctggctcactttgattgcagaggtagatttgggaag
cagcaacacctgctgaagtatcacatggcccggctttatgagcatgagcaccagagggag
gattctctacccaacgctctggaggattttctggcattccaagaagctcgggaggccttc
ataaaacaattttccttgctggaagcttccacaggcacactcttagcccagctgcatggc
attacatccactttgaactgcagcatcagcatgacggaggaagaggggaaggagaggagg
aaggatgaaggaagcaaggctgtttgtcagacgttcacagagactacgttcatggtcaga
gcgtctcagaaacagctaaagcaggcaacactggacctggacaacatgatcattcctttt
gaggtggtgtcagaacccaacaaatggaacgttttggtcaatgactcgcaggccctaatg
aaaagtcacagagaaacagcggaccacattgaggccatagccagcaaggcggcaagagcc
tcagagcagaccttcgctttcctgatggatctactgcaggacaactccacagaggagtac
atcaggaacctaacggagcaaataacacaaatgcagcagcagaaggtgaacctgagagca
cgggtgaatgaaacggtagccaaacagctggccctggaggaggaagctgctggtttaaag
cttgccctgggtaacatcacatcatccttacatcagttggctctgacagatgccagccca
tcacccgagcatgaccaaacgcggctcaaccaaacacgtccaaccaaccgtacaacagag
gatctgctaaaacaaaaagaagagatggaccagcagattcagaccaaagacaaactcatc
agtaagatcacagaggagatggagcctctcaaacagactgccagtaagaaactggaggag
gcgtatgacattagggagctgcaagctcacattcagggggtaaaggtcacggctttgtcg
tccgtggtggcggggaaagaggtggaatctgacgccatcgccctgcacagagaactagat
tacatggtgagggagtggccccgtcggcaaagccagaccagagctgctataaagaaggaa
agacccctggagggaaaggttctagctgatgtcaggaaaaaggtctcccagattgagaag
atgctaaaacctgtgctggaaaactccagcctctcccgcaacaccacaaaggaggcggaa
cggacagcacatgctgtggcaaaggaatccaaagccattctgacccaggccaagcatacc
aggactgcatccgctcaccttagctcccatatagactctgctttacaacagctggctaag
caggagatgctaactgacacagtcaactcccagatcacctcagagcctgaggtgtccctg
accagcgttatggaagacatggaagcagccaagctccagttaaaggcctattctgttaca
ctaaccgagctaatcagcaagattgatgtgaacgtgccgctggagcgctatgaccggatc
ttggatgagacagcgcgccgcctgagcatgcttcgcgggagcgtcgagagcccgacgctg
ggctccaagatccagaagctgcaatcggccgccaaggagcagcacagcaggatgtccttc
attgaacaggacttacaggagatcagggaggagagagacagtctcagggacatcgcctta
aacctgcctcggtcctgccccgaggccacaggagcaggtaaaggctag

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