Anoplopoma fimbria (sablefish): 129102367
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Entry
129102367 CDS
T09102
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04510
Focal adhesion
afb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129102367 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129102367 (lamc3)
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GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
129102367
NCBI-ProteinID:
XP_054468459
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All DBs
Position
14:5712492..5807023
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AA seq
1635 aa
AA seq
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METSFAVSSLLLALLLSLHLQCNLLVGAAMDSCFDEEGAQSRCMPKFENVAFNRTVVASN
VCGVPPEDYCMQTGSTRSCHRCDASDPDQSHNASLLTDFHRNEEPTWWQSQSMYYGIQHP
SSVNITLNLGKAFEITYIRLKFYTSRPESFAIYKRTAEDGPWLPYQFYSASCEKTYGKDA
NAYIRPGDDERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSLVLKEWVTATDLL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVELDQRGLVCSCQHH
TVGDDCQRCHPFYQDRPWARATGDSANECLKCNCSGRSDECVFDMEQYRSTGSGGRCVSC
RDNTDGPHCERCREDHYRNSDEEPCLPCNCNSNGSVSLQCDVEGRCACRDGVTGEKCDTC
RAGFHSLGPGGCRPCECDPSGSVDVCSPLDGRCYCKANVEGHSCDRCKPGSFNLQQDNLA
GCQACFCFGHSLACSSSDHHAAVSITSDFIEDQDGWLGEFSGGQLYPLLWKEGEVYLLPL
TEEDIGFYKAPEKFLGHQVLSYGQLLSITFTSETAELLPYHVTLLLQGSGVTLSADLSPQ
PVLDHDPGLTSRRSFVVRLHENEVRFKPLLSAFKFQQLLYNLTAFRISNAGGQNYTSQLA
GVTLTSAFISSGPAAPPAPWVESCSCPPGFVGQFCERCAPGFTREDSGRGPLSTCVPCNC
HQHGTCHPETGVCECSDFTTGMTCKRCLDGYYGNALIGTPADCQPCPCPGRTSCAEIAEK
RQVVCTNCPAGQTGMRCQMCEDGYYGDPLGQSGAVRPCTRCDCNGNVDFNALGICDHMTG
RCLKCLRHTEGDQCQRCQRGFYGDALNQTAGQKCKQCSCHQGGTSGHVNECHPQSGDCQC
LGHVTGRDCSNCEVGFFNLQPGVGCERCKCNPIGSSSIACHPITGHCVCRAGVDGRLCDS
CRAGFFGFSSRGCRACNCDPMGSISMQCHGNGTCHCRQGFVGYKCDKCEMNYFHNRATHQ
CEECPVCYGLVKKQAEKMKTRLQDLEKLLAHFDCRGRFGKQQHLLKYHMARLYEHEHQRE
DSLPNALEDFLAFQEAREAFIKQFSLLEASTGTLLAQLHGITSTLNCSISMTEEEGKERR
KDEGSKAVCQTFTETTFMVRASQKQLKQATLDLDNMIIPFEVVSEPNKWNVLVNDSQALM
KSHRETADHIEAIASKAARASEQTFAFLMDLLQDNSTEEYIRNLTEQITQMQQQKVNLRA
RVNETVAKQLALEEEAAGLKLALGNITSSLHQLALTDASPSPEHDQTRLNQTRPTNRTTE
DLLKQKEEMDQQIQTKDKLISKITEEMEPLKQTASKKLEEAYDIRELQAHIQGVKVTALS
SVVAGKEVESDAIALHRELDYMVREWPRRQSQTRAAIKKERPLEGKVLADVRKKVSQIEK
MLKPVLENSSLSRNTTKEAERTAHAVAKESKAILTQAKHTRTASAHLSSHIDSALQQLAK
QEMLTDTVNSQITSEPEVSLTSVMEDMEAAKLQLKAYSVTLTELISKIDVNVPLERYDRI
LDETARRLSMLRGSVESPTLGSKIQKLQSAAKEQHSRMSFIEQDLQEIREERDSLRDIAL
NLPRSCPEATGAGKG
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatcctttgctgtgagctctcttctcctggccctgctcctctctctccatctg
caatgcaacctccttgttggggccgcaatggactcctgctttgatgaggagggcgcccag
agccgttgcatgcctaagtttgagaacgtggccttcaatcgtactgtggtggcatccaac
gtgtgtggcgtcccacctgaggactactgcatgcagaccggctccacgcgctcatgccac
cgctgcgacgcctcagatccagaccagagccacaatgccagcctcctgacagacttccac
aggaatgaggagcccacatggtggcagagccagtccatgtactatggtatccagcacccc
agttctgtcaacatcaccctaaacctggggaaggcttttgagataacctatatacgattg
aaattctacaccagtcggccggagagcttcgccatctacaagcgcacggcagaagatggg
ccctggttgccttaccagttctacagcgcctcttgtgagaagacctacgggaaggatgcc
aatgcctacattcgcccaggagatgatgagaggaccgcgttatgtacggatgagttcagt
gacatctctcccctcactggaggaaacgtggccttctccaccctggagggacggcccagt
gcatacaactttgaccaaagcttggtgttgaaggaatgggtgacagccactgacctgctc
atctctttggacaggcttaacacctttggagacgagttcttcaaggacgctaaagtgttg
cgctcgtacttctatgccatctctgatttctctgtgggcggcagatgtaagtgtaacggt
cacgccagcgagtgcgttgagttggaccagcggggcctggtgtgttcttgccaacatcac
acggtgggagacgactgccagagatgtcaccccttctaccaagacagaccctgggccagg
gccactggggactctgccaacgagtgtctgaagtgtaactgcagtgggaggtcggacgag
tgcgtgtttgacatggagcagtaccggagcactggcagcgggggtcgctgtgtgagctgc
agagacaacactgatgggccccattgtgagcgctgcagagaggaccactacaggaattct
gatgaagagccctgcctgccatgcaactgcaatagtaatggttcagtgagtctgcagtgt
gatgtagaaggaaggtgtgcgtgtcgagatggcgtgacaggggagaagtgtgacacatgt
cgggctggctttcactcgcttggccctggcggctgcaggccgtgcgagtgtgaccccagc
ggcagcgtggacgtctgctctcctctggatggacgttgctactgtaaggccaacgtggag
gggcacagctgtgacagatgcaaaccaggctctttcaacctacaacaagacaacctagca
ggatgccaggcgtgtttctgcttcggacactctctggcctgctcctcgtccgatcaccac
gccgctgtcagcatcacttctgacttcattgaagatcaggacggctggttgggagagttc
tccggagggcagttgtaccccctgctgtggaaggaaggtgaagtctacctgcttcctctt
accgaggaagacatcggcttctacaaagcccccgagaaattcctgggtcatcaagtcctc
agctacggccagctcctctccatcaccttcacctccgagaccgccgagctgctcccctac
cacgtcaccttgctcctccaaggctctggagtcaccctatctgccgacctttcaccccag
ccggtgcttgaccatgaccccggcctcacatcgcggcgctccttcgttgtcaggcttcat
gaaaatgaggtgagattcaaacctctgttgtctgcctttaagttccaacaacttctttac
aacctgacagctttcagaatcagcaacgccggaggacagaactacacgtcgcagctcgcg
ggggtaaccctgacctcggctttcatctcctccggtccagccgcccctcccgccccgtgg
gtggagtcttgttcctgtcccccggggtttgtaggccagttttgcgagcgctgtgccccg
ggattcacccgggaggactccggcagagggcctctctcaacatgtgtgccatgcaactgc
caccagcatggaacatgtcatccagagacgggtgtgtgtgagtgctctgacttcaccact
gggatgacctgcaagcgctgcctggatggttactatggcaacgctttgattggcacgccc
gctgattgtcagccttgcccttgcccaggccgtaccagctgtgccgaaattgcagagaaa
agacaggtggtctgtaccaactgccctgcaggacagacagggatgcgatgtcagatgtgt
gaagatggttactatggtgaccccctgggacaatctggtgcagttcgaccgtgtaccaga
tgcgactgcaatggcaacgtggacttcaacgcgttgggaatatgcgaccacatgactggg
cgatgtctgaaatgcctgagacacacagagggcgaccagtgccaacgctgccagcggggt
ttctacggcgacgccctgaaccagacagctggccagaagtgcaagcagtgcagctgccat
caaggcggaacctctgggcatgtaaatgaatgccatcctcagtctggagattgccagtgc
cttggtcatgtgaccggacgggactgcagtaattgtgaagttggcttcttcaacctccaa
ccaggcgtaggatgtgagaggtgcaagtgtaacccgattggctcatcctccatcgcgtgc
catccaatcacagggcactgcgtgtgtcgagcaggagtggacgggaggctgtgtgattct
tgccgtgcaggcttctttggattctcgtcacgaggttgcagagcctgtaactgtgaccca
atgggttccatttcaatgcagtgtcacggtaatggtacctgccactgccgccagggcttt
gtgggttataagtgtgacaaatgtgagatgaactacttccacaacagggccacacaccag
tgtgaggaatgcccagtttgctatggccttgtcaagaaacaggcagaaaagatgaagact
cgcctgcaggatttggagaagctgctggctcactttgattgcagaggtagatttgggaag
cagcaacacctgctgaagtatcacatggcccggctttatgagcatgagcaccagagggag
gattctctacccaacgctctggaggattttctggcattccaagaagctcgggaggccttc
ataaaacaattttccttgctggaagcttccacaggcacactcttagcccagctgcatggc
attacatccactttgaactgcagcatcagcatgacggaggaagaggggaaggagaggagg
aaggatgaaggaagcaaggctgtttgtcagacgttcacagagactacgttcatggtcaga
gcgtctcagaaacagctaaagcaggcaacactggacctggacaacatgatcattcctttt
gaggtggtgtcagaacccaacaaatggaacgttttggtcaatgactcgcaggccctaatg
aaaagtcacagagaaacagcggaccacattgaggccatagccagcaaggcggcaagagcc
tcagagcagaccttcgctttcctgatggatctactgcaggacaactccacagaggagtac
atcaggaacctaacggagcaaataacacaaatgcagcagcagaaggtgaacctgagagca
cgggtgaatgaaacggtagccaaacagctggccctggaggaggaagctgctggtttaaag
cttgccctgggtaacatcacatcatccttacatcagttggctctgacagatgccagccca
tcacccgagcatgaccaaacgcggctcaaccaaacacgtccaaccaaccgtacaacagag
gatctgctaaaacaaaaagaagagatggaccagcagattcagaccaaagacaaactcatc
agtaagatcacagaggagatggagcctctcaaacagactgccagtaagaaactggaggag
gcgtatgacattagggagctgcaagctcacattcagggggtaaaggtcacggctttgtcg
tccgtggtggcggggaaagaggtggaatctgacgccatcgccctgcacagagaactagat
tacatggtgagggagtggccccgtcggcaaagccagaccagagctgctataaagaaggaa
agacccctggagggaaaggttctagctgatgtcaggaaaaaggtctcccagattgagaag
atgctaaaacctgtgctggaaaactccagcctctcccgcaacaccacaaaggaggcggaa
cggacagcacatgctgtggcaaaggaatccaaagccattctgacccaggccaagcatacc
aggactgcatccgctcaccttagctcccatatagactctgctttacaacagctggctaag
caggagatgctaactgacacagtcaactcccagatcacctcagagcctgaggtgtccctg
accagcgttatggaagacatggaagcagccaagctccagttaaaggcctattctgttaca
ctaaccgagctaatcagcaagattgatgtgaacgtgccgctggagcgctatgaccggatc
ttggatgagacagcgcgccgcctgagcatgcttcgcgggagcgtcgagagcccgacgctg
ggctccaagatccagaagctgcaatcggccgccaaggagcagcacagcaggatgtccttc
attgaacaggacttacaggagatcagggaggagagagacagtctcagggacatcgcctta
aacctgcctcggtcctgccccgaggccacaggagcaggtaaaggctag
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