Anoplopoma fimbria (sablefish): 129102416
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Entry
129102416 CDS
T09102
Name
(RefSeq) programmed cell death 1 ligand 1-like
KO
K06745
programmed cell death 1 ligand 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129102416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afb04090
]
129102416
CD molecules [BR:
afb04090
]
Proteins
129102416
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Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set_3
Ig_2
V-set
NACHT
ig
C2-set_2
Ig_VEGFR-1-like_5th
C1-set
Zwei_Ig_N
AAA_18
C2-set
nSTAND3
Saf_2TM
APS_kinase
AAA_25
NPHP3_N
Ig_VWDE
AAA_33
AAA
AAA_22
DUF3954
ABC_tran
AAA_16
AAA_17
Motif
Other DBs
NCBI-GeneID:
129102416
NCBI-ProteinID:
XP_054468529
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Position
14:complement(17201176..17209691)
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AA seq
506 aa
AA seq
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MLFKGLQISMDWAIIVVLQVLFQPSLSALFTVEAERTMYESNYGEDVVMGCRFQPKLSNL
NADLKVTWHWISSTSFREVYRMDNWKEHLASRDPDYRGRVKLLTEELHEGRAKLQVSRLR
INDSGTYQCLVQTAEGVDYKMITLSVVAPYKSVTKRIHKAAEGDEVLLTCQSQGYPESSV
TWQDGHLQRLNSTTTAVSTADQLFTVTSQIRIRSSDRNNYTCFFTNDGISETFHIPDGIP
DPHVKHDALIVVLSIGVIMLVIIIAVVMYRRQKGSSTHNTRNVLVDVRGLEKDKGNEEEI
IMFNEVSMEENLGVFLKAHYCNFSFSPEVRHHWDAFVVEEMPHRLRNNEGHPVNLQALLP
EAGETLFLEGLPGSGKTTVAHILVSSWTEGPTHALSNLLDLSKLPLLFFVNCSKVKGHLI
HEITNQLSLPVKIAMEDKLRTVLTRSSEPLLLLDGYREGNQFFDESLRKFLMERGRCRVL
VMACPGHCPTLKDTIETERVLQLQTV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttaaaggactgcagatctcaatggactgggccataattgtagttttgcaagtc
ctgtttcagccatctctctcagcgttgttcactgtggaggcagagcgaaccatgtatgag
tcaaattatggagaagatgttgtgatgggctgcaggttccagcctaaactatcaaacctt
aatgctgacctgaaggtgacctggcactggatcagctccacctcctttcgggaagtgtac
cgtatggataactggaaggagcacttggcgtcccgggatccggactatcggggcagagtg
aagcttctcactgaggagctgcatgaaggccgggccaagttacaggtctctaggctcagg
atcaatgactctgggacataccagtgtttggtacagacagcagaaggagttgattataaa
atgattactttgtccgttgtagcaccctataagtcagtgactaaacgcattcataaggct
gcagagggggatgaggtgctgcttacctgccagtctcagggataccccgagtcttctgtt
acgtggcaggacggacacctgcaaagactcaattccaccaccacggctgtatcgactgca
gaccagcttttcacagtcaccagtcagatacgcatcagatcatcagacagaaacaactac
acgtgtttcttcacaaatgatggcatttctgaaacatttcacattccagatggaattcct
gatcctcatgtaaaacatgatgctctcatcgttgtgttgagcataggagtgataatgttg
gtcatcatcattgcagtggtcatgtacagacgacaaaaaggttccagcactcataatacc
aggaacgtattggtcgacgttcgaggcctagaaaaagataaaggcaatgaagaagagata
atcatgtttaatgaagtttccatggaggaaaacctgggggtgtttctgaaagcccattat
tgtaacttctccttcagcccagaggtgcgacaccactgggatgcttttgttgtggaggaa
atgcctcacaggctgcgaaacaatgagggccaccctgtgaatcttcaagctctactccca
gaagcaggagagacacttttccttgagggactaccaggaagcgggaagacaacagtagcc
cacatcctggtctcttcttggactgaggggcccacacatgcactctctaacctcctcgat
ctcagcaaacttccacttctcttctttgtcaactgcagcaaagtgaagggtcacctgatt
catgaaataacgaatcaactctctctcccggtaaagatagcaatggaggataagctgagg
acggtgttaactaggtccagtgagcctctgctgctgctggatgggtatagagaagggaac
caatttttcgatgagtccttgaggaagtttctgatggaaagaggaagatgcagggtgttg
gtcatggcctgcccgggacactgccccacactgaaggacacaattgagacagaaagggtg
ctgcagctccaaacagtatga
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