Anoplopoma fimbria (sablefish): 129102421
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Entry
129102421 CDS
T09102
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04210
Apoptosis
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129102421 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129102421 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129102421 (sptan1)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129102421 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
129102421 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
129102421
NCBI-ProteinID:
XP_054468535
LinkDB
All DBs
Position
14:9025803..9062203
Genome browser
AA seq
2460 aa
AA seq
DB search
MDTAGVKVLETAEDIQERRQQVLDRYRRFKELSIMRRTKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDETGNHMISEGHFSSETI
RTRLEELHRLWDLLLQRTKEKGMRLLQAQKLVQYLRECEDALDWISDKEAMATSEELGQD
LEHVELLQKKFEEFQTDLAAHEERVNEVNQLAAKLIQEAHPEAELIVRKQDEVNAAWQRL
KGLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGDAERLQQTHPQNATQIHLKKDELVTNWEQIRTLAAERHARLNDS
YHLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRTT
DEAGQALLNTGHYASEEVKEKLGILAEEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASTEVAGRMEEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVLRYEALREPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEISGHEPRI
KAVSQKGEAMVEEGHFAGEDVKVKLAELHERWDTVKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEHGSIALRQDQIDNQYGTLLELGEKRKDMLEKSCKKFMLFREA
NELQQWINEKESALTNEEMGSDLEQVEVLQKKFDDFQKDLKANESRLRDINKVASELESE
GLMAEEAPMVQAQQQELVGSAPGKDEADSKTASPWKNIRLAVQTTANFNTIKELNNRWRS
LQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEG
FERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELNTAWSSLVGRADQRKDKLGN
SHDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEALLERHQEHRTEIDARAGTFQA
FEQFGQQLLVRGHYASPEIQQKLEALDRERADLEKAWVQRRMMLDQCLELQLFNRDCEQA
ENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQSFADQLIGADHY
AKPEIFNRRNEVLDRWRRLKTQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTATDE
SYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTGNTLIQRGACAGSEDAVKAR
LNALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLAS
VNNLLKKHQLLEADISAHEDRLKDLNGQADSLMVSSAFDTSQVKDKRDAVNGRFTKIKSM
AAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAE
LGAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVDHWKELKDLSGARGQRLEESLEY
QQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHEAFETDFTVHRDRVNDVCTN
GDELIKKNNHHVDSISAKMSALRGKVSELERAAAQRKAKLDENSAFLQFNWKADVVESWI
GEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNITALKDQLLAAKHVQSK
AIEARHAALIKRWNQLLSNSGARKKKLLEAQEHFRKVEDLFLTFAKKASAFNSWFENAEE
DLTDPVRCNSLEEIRALREAHEAFRSSLSSAQADFNQLAELDQQIKSYQVVSNPYTWFTM
EALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWLQETRTYLLDGS
CMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQ
QWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCL
RSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESA
FRALSTENKPYVTKEELYQNLSKEQADYCLSHMKPYLDGKGRELPSAFDFVEFTRSLFVN
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcaggggtcaaagtgctggagacagctgaagacatccaggagcgccgacag
caggtactggatcgctaccggcgcttcaaggagctgtccattatgcgccgaacaaagctg
gaggactcttaccgctttcagttcttccgccgcgacgccgacgagttggagaagtggatc
caggagaagctgcagattgcatctgatgagaactacaaggacccctccaacctgcagggt
aagctgcagaaacatcaggcctttgaagctgaagttcaggccaacgctggggcaattatc
aaactggacgagaccggaaaccatatgatcagcgagggacacttctcctctgagaccatt
cgaacccgtcttgaagagctgcaccgcctctgggaccttctgctgcaaaggaccaaggag
aagggcatgcgtctcctgcaggcccagaaactggtccagtacctgcgagagtgtgaagat
gccctggactggatcagtgacaaggaggccatggccacctccgaggagctgggccaggac
ctggagcatgtggagcttctgcagaagaagttcgaggagtttcagactgacctggctgcc
catgaggaacgtgtgaatgaggtgaaccagctggccgccaagctgatccaggaagcccat
cctgaggctgagctcatagttcgaaagcaggacgaggtcaacgcggcctggcagcgcctg
aagggcctcgcccagcagaggcagggcaagctgtttggggctgctgaggtgcagcgcttc
aacagggatgtggatgagaccattagttggatcaaggagaaggagcagctgatggcctct
gatgactttggtcgtgacctggccagtgtgcaggccctgcttcgcaaacacgaggggctg
gagagagacctggctgccctggaagataaggtcaacacactgggtggggatgcagagcgc
ctacagcagacacatccacaaaatgccacacaaatccatctgaagaaagacgaactcgtc
accaactgggaacagattcgcactctggccgctgagcgccacgcccgcctaaacgactcc
taccatctgcagcgtttcactgctgacttcagggatctgaccagctgggtgacagagatg
aaagccctgatcaatgctgacgaactggccaatgacgtggctggagctgaggctctgcta
gaccgccaccaggagcataagggagagattgatgctcatgaagacagttttagaaccact
gatgaagctggccaggccctgctcaatacaggacactacgcgtctgaggaggtcaaggaa
aagctgggcatccttgctgaggagaaggagtctctgctggagctgtgggaggttcgcagg
cagcagtatgagcagtgcatggacctacagctattctacagagatactgagcaagttgac
aactggatgagcaaacaagaggctttcctcctgaatgaagacctcggtgactccctggac
agtgtagaggcgctgctgaagaaacatgaggactttgagaagtcgcttagtgcccaggaa
gagaagatcacggccctggatgagtttgctaccaaactaatccagaacaaccactatgct
aaagaggatgtggccacccgcagagatgctctgctcagccgccgcaacgccctgcatgag
cgtgctcagtctcgtcgtgctgccttggaggactctttccacctacagcagttcttcagg
gactcagatgagctcaagagctggatcaacgagaagatgaagacggccacggatgaggct
tacaaggacccctccaacctgcagggcaaggtgcagaaacaccaggcatttgaagctgag
ctgtcagctaatcagagccgcattgatgccctgcagaagtctggccaggagctgctggat
ggaaagcattatgcctccactgaggtggctggccgcatggaggaagtcagctcccagtgg
aaaaaactgcttgaggccactgagcttaaaggcatcaagctccgtgaggccaaccagcag
cagcagttcaacaggaatgtagaggacattgagctgtggctgtacgaggttgagggccac
ctggcttcagatgactatggaaaagacttgactagtgtccagaacctgcagaagaaacac
gcactgctggaggccgatgtggctgctcaccaggatcgcattgatggcataacaatccag
gctcgccagttccaagaggcgggacactttgatgctgacaacatccgcaagaagcaggaa
gctttagtgttgcgttatgaagctctgcgtgagcccatggctgctcgcaagcagaaactg
tccgactctcttcggctccagcaactattcagagacgtggaggacgaggagacttggatc
agagagaaagagcccattgctgcctctactaacagaggcaaagacttgattggagtccaa
aacttgctgaagaagcaccaggccttgcaggctgagatctccggtcatgagcctcgcatt
aaggctgtttcccaaaaaggagaggccatggtggaggaaggacactttgctggagaggat
gtgaaagttaagctggctgagctacatgaacgctgggacacagtgaaggctaaggcctcc
caaaggagacaggatttggaggactctctgcaggcccagcagtactttgctgatgccaac
gaggccgagtcttggatgagggagaaggagcctatcgtggggagcacagactatggcaaa
gacgaggactctgctgaggctttgctgaagaagcatgaggccctgatgtctgacctgagt
gcctatggcagcagcatccaagctctgaaggaacaggcccagtcatgcaggcaacaagtg
gcaccgacagatgacgagaccgggaaggagctggtcctggccttgtacgactaccaggag
aagagtccccgtgaagttaccatgaagaagggggacatcctcaccctgctcaacagcacc
aacaaggattggtggaaggtggaggtgaacgatcgccagggctttgttcctgctgcttat
gtgaagaagttggaccctacccagtcctcgtccagggaaaacctgctggatgaacacggc
agcattgcactgcgccaagaccagattgacaatcagtatggtactctgttggagctggga
gagaaacgcaaggacatgctggagaagagctgcaagaagtttatgttgttccgtgaggcc
aatgagctccagcagtggatcaatgagaaggagagtgctctcactaatgaagaaatgggt
tcagacctggaacaggttgaggtcctgcagaagaagtttgacgacttccagaaggacctt
aaggccaatgagtctcgtctaagggacatcaacaaagtggcgtctgagctggagtctgaa
ggcctcatggctgaggaggcccccatggttcaggctcagcagcaagagctggttggttct
gctcctggcaaggatgaagccgattccaagactgcatctccatggaagaatatacgcttg
gctgttcaaacaacggctaactttaatactatcaaggagctgaataatcgctggcggtcc
ctgcagcagctggctgaagacaggagcaacatgctgggcagtgcccacgaggtgcagcga
ttccacagggatgctgatgaaactaaagagtggattgaggaaaagaaccaggccctcaac
actgacaactacggtcacgacttggccagtgtccaggctctgcagcgcaaacacgaaggc
tttgaaagagacctggcagctctgggggataaggtgaactctcttggggagacagcagag
cgtctgatccagtcccacccagaggcagtggatgacatccaggagaaatgcactgagctg
aacactgcctggagcagcctggtggggagagctgatcagcgcaaagacaagcttggcaac
tcccacgacctgcagcgcttcctctctgacttcagagatctgatgtcctggatcaatggc
atacgagggctggtgtcctcggaggagctggccaaagacgtgaccggagccgaggccctt
ctggaaagacaccaggaacaccgcacagagatcgatgctcgtgccggtaccttccaggcc
tttgaacagtttggtcagcagctgttggtgcgcggccactatgctagtcctgagatccag
cagaaactggaggctctggatcgtgagcgggctgacctcgagaaggcctgggtgcagcgc
cgtatgatgttggaccagtgcctcgagctccagctcttcaacagggactgtgagcaggct
gagaactggatggcagctcgtgaagccttcctcgctagcgatgacaagggtgactccctg
gacagtgtggaggccctcatcaagaaacatgaagactttgacaaggccattaacgtgcag
gaggagaagattgcagctctgcagtcctttgctgaccagctgattggagctgatcattac
gccaaacctgagatcttcaaccgccgcaatgaagtcctcgataggtggcgccggctgaag
actcagatgatcgaaaagcgttccaagctgggtgaatcccagaccctgcagcagttcagc
agggatgtggatgagatcgaggcctggatcagtgagaagctgcagactgcaactgatgag
tcctacaaggaccccaccaacattcagctgtccaagctgctgagtaagcatcagaaacat
caggcctttgaggctgagcttcatgccaacgcagaccgaatccgaggggtcattgacaca
ggcaacaccctgatccagagaggagcctgtgccggcagcgaggacgcagtcaaggcccgc
ctcaacgctctggatgaacagtggcagttcctcgtcaacaaatcagcagagaagagccag
aaactcaaagaagccaacaagcagcagaatttcaacacaggcatcaaagactttgacttc
tggctctctgaggtggaagctcttcttgcctctgaggattatggcaaagatctggcctca
gtgaacaacctgctgaagaaacaccagctgctggaggctgatatctctgcccatgaggat
cgcctgaaggacctgaacggccaggctgacagcctaatggtcagcagcgccttcgacacc
tcacaggtgaaggacaagcgcgatgccgtcaacggccgcttcactaaaatcaagagcatg
gctgcaggtcgccgtgccaaactcaatgagtcacaccgcctgcatcagttcttcagggac
ctggatgatgaagagtcttggatcaaagaaaagaagttgcttgtgagttcagaagactac
ggacgtgatttgacaggagtacagaatctgaggaagaaacacaagaggttggaggctgag
cttggagcccatgagccggccattcagtcggtgctggacactgggaagaagctgtctgat
gacaacaccatcggccaggaggagatccagcagaggctagctcagtttgtcgaccactgg
aaggagctaaaagacttatctggagcaaggggacagaggctggaggagtcgctggagtac
cagcagtttgtggcgaacgtggaagaggaagaagcttggattaatgagaagttgaattta
gtggggagcgaggactacggagacacactggctgctgtgcagggcttgctgaaaaagcac
gaagcatttgagactgacttcaccgtgcacagggacagagtcaacgatgtgtgcactaac
ggagatgagctaatcaagaagaacaaccatcacgtagacagcatcagtgccaagatgtcg
gctctccgaggcaaagtgtctgagctggagagggcagccgctcagaggaaggccaagcta
gacgaaaactctgccttcctgcagttcaactggaaggcagatgtggtggagtcctggatc
ggtgagaaagagaacagcctgaagactgatgactacggcagagacctgtcctctgtccag
actctgctcaccaagcaggagacttttgatgccggtctccaggccttccagcaggagggc
atcaccaacatcacggctctcaaggaccagctgctggccgccaagcacgtccaatcaaaa
gccatcgaagcacgtcacgccgccttgattaagcgctggaaccagctgctttccaactca
ggcgctcgcaagaagaaactcctggaggctcaagagcacttcagaaaggttgaggacttg
ttcctgacattcgccaagaaggcatcagccttcaacagctggtttgagaatgcagaggag
gacctgacagacccggttaggtgcaactctctggaggagatccgggcactgcgtgaagcc
cacgaggccttccgctcctcgctgagctcggctcaggccgacttcaaccagctggccgag
ctagaccagcagatcaagagctaccaggtggtgtccaacccctacacctggttcaccatg
gaggccctggaggagacttggagaaacctgcagaagatcatcaaggagcgagagctggag
ctgcagaaggagcagaggaggcaagaagaaaacgacaagttgcgtcaagagtttgcgcag
cacgcaaatgctttccaccagtggctgcaggagaccaggacatatcttttggatgggtcg
tgtatggtggaagaatctggtaccctggagtcccagctggaggccaccaaacgtaagcac
caggagattcgggcaatgcgcagccagctgaagaagattgaagacctgggtgcagctatg
gaggaagcactgatattggataacaagtacacagagcacagcacagtgggcttggcccag
cagtgggaccaactggaccagctgggaatgaggatgcagcacaacctggagcaacagata
caggccaggaacaccactggagtgacagaggaggccctgaaggagtttagcatgatgttc
aagcacttcgacaaagagaagtccggccgtctgaaccatcaagagttcaagtcgtgtctg
cgctcgctaggctatgacctgcccatggtggaggaaggagaacctgatcctgagtttgag
gccatactcgacaccgtggatccaaacagggatggaaatgtgtcgctgcaggagtacatg
gcgttcatgatcagccgtgagacggagaatgtcaagtccagtgaggagatcgaaagcgcc
ttccgagccctcagcacggagaacaaaccctacgtcactaaagaagagctctaccagaac
ctgagcaaggagcaggcggactactgcctctcacacatgaagccctatctggacggcaag
gggcgagagctgccatcagctttcgactttgttgaattcacccgctcgctctttgtcaac
tga
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integrated database retrieval system
