Anoplopoma fimbria (sablefish): 129102453
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Entry
129102453 CDS
T09102
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04068
FoxO signaling pathway
afb04110
Cell cycle
afb04120
Ubiquitin mediated proteolysis
afb04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129102453 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
129102453 (skp2)
04150 mTOR signaling pathway
129102453 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129102453 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129102453 (skp2)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129102453 (skp2)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_9
LRR_NXF1-5
LRR_4
LRR_At5g56370
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
129102453
NCBI-ProteinID:
XP_054468589
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All DBs
Position
14:complement(9414731..9422431)
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AA seq
458 aa
AA seq
DB search
MTREHGAPVAGGGEFKESRLVGSSESGSLTQRTRYRLGSNRRNPEHSMPLQDLPCLSLQG
SMLSQARKINKRKPRGCLSEGLDMECTPTELIQQWSPLHKHQRLTSKGKENTGNQFVLAR
RSRRKRESTSSISWDHLPDELLLRILFYIPLQDLLRMSTVCMRWHRLAFDESLWHSVDLE
GLTHVGPALQQVLKTGVRMLRCPRSFVEELLFTGTGPLQIVVMDLSSSIIPTSSLESIIC
QCRQLEYLSLEGLQLSDNVISSLSKNPNLLQLNLSGCSGLSAPALADMLQSCTSIEQLNI
AWCDFSNDHVKSVVANVSASVTHLNISGYRENLTLDDVKVLVTRCPNIQTLDLSDSSLLM
ADSFPVLKQLKALLHLSLSRCYHIHLAALTGLDKTFPTLSLLDVFGIVTGSHLSSLKKEM
PRVSINSRPFSSVARPTPASRPIGCFMWNRKCRLRFKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaacacggggcgcctgttgctggcggcggtgagtttaaagagtctcggttg
gtgggcagcagtgaaagcggctctctaactcaacgaacacgttaccgtctaggttcgaac
cggaggaatccagaacacagcatgccactgcaggatctgccctgcctgagcctccagggc
tccatgttgtctcaggccaggaagatcaacaaacgcaagcctcgaggctgcctcagtgag
ggcctggacatggaatgcaccccgacagagctcatccagcagtggtcaccactccacaag
catcaacggctcaccagcaagggcaaagagaacacgggcaaccagttcgttcttgccagg
aggtcgaggaggaagagagaatccacttcatccatttcttgggaccacctacctgacgag
ctgctcctcaggatcctcttttacatccctctgcaggacctcctcaggatgtcgacagtt
tgcatgcgctggcatcgcttagcgtttgatgagtctctgtggcacagcgtggatctggag
gggttgacccacgttggtccagctctgcagcaggtgctgaagactggagtccgcatgctg
cgctgccctcgctcctttgtggaagagctgctcttcacaggcacaggccctctgcagata
gttgttatggatctgtccagctccatcatccccacctcatctctggagagcatcatctgt
cagtgcaggcagctggagtatctgagcctggagggtctgcagctctcagacaacgtcatc
agctctctgtctaagaacccaaacctgctgcagctcaacctgagcggctgctctggcctc
tctgctcccgctctggctgacatgctccagtcctgcaccagtatagagcagttgaacatc
gcatggtgtgactttagcaatgatcacgtgaagagtgttgttgctaacgtgagcgctagt
gttactcacctcaacatcagcggatacagagagaacctcacgctagacgatgtgaaggtg
ctggtgacgagatgcccaaatattcagacactagatttaagcgacagcagcctgctgatg
gccgacagcttccctgtcctcaaacagctgaaggctctgctgcatctctccctgagtcgc
tgctatcacatccacctcgctgctctcacaggtttggataagaccttccccacgctgagc
ctgctggacgtgttcggcatcgtaaccggcagccacctgtcgtctctgaagaaggagatg
cctcgcgtcagcatcaactccaggcccttctccagcgtcgcccggcccacgcctgcctcc
aggcctatcggctgcttcatgtggaacaggaagtgtcgactgaggttcaaactgtaa
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