Anoplopoma fimbria (sablefish): 129102493
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Entry
129102493 CDS
T09102
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129102493 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129102493 (exosc2)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129102493 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
129102493 (exosc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
129102493
NCBI-ProteinID:
XP_054468645
LinkDB
All DBs
Position
14
Genome browser
AA seq
293 aa
AA seq
DB search
MAADMRLPTVQKTVSLSASAFDRKDLVVPGDVITSDTGFMRGHGTYVDDDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRVTEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPEQLDEEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSVPHEVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattaccaactgttcaaaaaacagtgtctttatcagcttcagct
ttcgaccgaaaagatctggtcgtccccggcgatgttatcacttcagacaccggcttcatg
aggggtcatggtacctatgttgatgatgacaagctgacggcttcagttgctggagaggtg
cagagagtagacaagctgatctgcgtcagaccacttaagaccaggttcaacggtgaggtt
ggagatgtggtggttggcagagtcacagaggtacaacagaaaaggtggaaggtggagacc
aactcccggctggactctgtcctgttgttgtcctctgtcaatctgcctggaggagagctg
aggagacgatcagcagaagacgagctcaccatgagagaataccttcaggagggcgacctc
atcagtgcagaggtgcagtctgtcttctcagacggagccctatccctgcacacccgtagc
ttaaagtatggaaaattgggtcaaggagtgctggtacagctctctccttctctgatcaag
aggcagaaaacccatttccacaatctgccttgtggtgcatccatcatcctcgggaataac
ggctttgtgtggttgtatcccacacctgaacaactggatgaggaggctgggggattctat
accagcctggagcctgttagtctgtcagatcgagaggtgatttcacggttgagaaactgt
ctactcgctttggctgcacacaaggtccttttgtatgacaccagtgttctctattgctat
gaatcttcagttccacatgaggtcaaggacatcttgaaaccagaagtgatggaggagatt
gtaatgttgacgcaacagaagctgttggaacaggaaggttaa
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