Anoplopoma fimbria (sablefish): 129102607
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Entry
129102607 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: rab GTPase-activating protein 1
KO
K20284
Rab GTPase-activating protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129102607
Membrane trafficking [BR:
afb04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129102607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
129102607
NCBI-ProteinID:
XP_054468806
LinkDB
All DBs
Position
14:17286728..17351220
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AA seq
1091 aa
AA seq
DB search
MDDKGSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQRELEDVLMEPSVADAGLRSETGMESLGGXDRGPLSTTASPVPPGSDPL
SAPPPKLEMVLPVQTAQESELNERSYRADESSSDGSPGSPIPDEDSVVFSQLTYLGCASV
NXPRSEVEALRMMSILRGQCQLPLDVTLSVPGVSEGTVRLLDPNASTEIANYPIYKILFC
VRGHDGTPESDCFAFTESHYNAEIFRIHVFRCQIQEAVSRILYSFATAFRRSAKKAVLSS
QQPASLTPDSDLFTFTVSLEIREDDGKGTFSAVAKDKDKQSFKLRAGMDKKIVIYVQQTS
NKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQFQPVNE
ETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSKRNYIETFYLKLR
QMERKERKSPASDTLYEVLSLESETEREKRKTTASPGIMSTGTGTSVPSPPEDDEEEDND
EPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPKQLPALVRSGIPEALRGEVWQLL
AGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYS
VYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQLE
RLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNV
ALALLKTSKDDLIQTDFEGALKFFRVPVPKRYRSEENAKKLMELACSMKISQKKLKKFEK
EYHTLREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNAEE
KADALNKELLLTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNSSIIGEYKQ
ICSQLSERLEKQQTSNRGELEKIRSKVEGCEKCSSLFNKEGRVRAAVTSATAGGTEETDE
EKEDLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIK
TVTGTQGKETT
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagggctcggtggggaagattagcgtgtcttcggactcagtgtccactctc
aacagtgaggactttgtccttgtgtcccggctgggggatgagacaccctcctccactaat
aatggtagtgatgacgaaaagacaggactgaaggtgatttctgaggaaggggtcagcttt
aagattgtggggaatggaagtgagcagcagctccagagggagttagaagatgtcctcatg
gaaccatccgtagccgacgctgggctcagatcagaaacaggaatggagagtcttggcggg
ngcgaccgtggcccactttccacgacggcgtcacctgtaccgccaggctcagaccctctg
agtgcaccaccacccaagttggagatggtgcttcctgttcagacagctcaggagagtgag
ctgaatgagaggtcttaccgagcagatgaatcctcgtcagatggcagtcctggcagtccc
atcccagatgaggacagcgttgtgttcagccagctgacatatcttgggtgtgcctcggtc
aatngcccccgcagtgaggtggaggcgctccgtatgatgagtatcctcagagggcagtgc
cagctccccctagatgtcacactgtctgtgccaggcgtgtccgaaggcactgtcaggttg
ctggaccccaacgccagtacggagatcgccaactaccccatctacaagattctgttctgc
gtacgaggccacgatggcacaccagagagcgactgcttcgccttcactgagagccactac
aatgcagagatcttcaggatccatgtgttccgctgccaaatccaggaagcggtgagtagg
atactgtacagctttgccacagcgtttcggcgctcagctaagaaggcagttctgtcatct
cagcagcctgcatcgctcacccctgacagtgacttgtttactttcactgtcagcctggaa
atcagggaggatgacggcaagggtaccttcagtgctgtagcaaaagacaaggacaagcaa
agcttcaagctgcgcgcaggaatggacaagaagattgttatttatgtccagcagacctcc
aataaggaactggctattgagaggtgtttcggtctcctgctcagcccagggaaaaatgtg
aagaacagcgacatgcacctgctagatctggagtcgatgggaaagagttccgacgggaag
tcttacatcatcacaggaagttggaaccccaacacgcctcagttccagcctgtgaatgag
gaaacgcccaaagataaattcatgtacatgacgacagcagtggacctggtgatcacagag
gtggaggagccggttcgttttctgctggagacgagggtcagagtctgctcccccaatgac
aggctgttctggcccttcagcaagcgtaactacatcgagaccttctaccttaaactgcgg
cagatggagcgtaaggagcgtaagagtcctgcctctgacactctttatgaagtgttgagt
ttggaaagtgagactgagagggagaaacggaagaccacagctagtcccggcataatgtcc
accgggactggtacctcggtcccttcaccccctgaggatgacgaagaggaagataatgat
gagccgttactcagcgggtcaggtgacgtttccaaggagtgtgcagagaagatcctggag
acctggggggatttgttatccaaatggcatttgaacttatccgtgcgtcccaagcagctg
ccagctttggtgcggagtggcattcccgaggctctccgtggggaggtgtggcagctcctg
gcaggctgccataacaatgaccaccaggtagaagagtaccgcactcttattacaaaggag
tcccctcaagacagtgccattaccagggacattaacaggacattcccggctcatgactac
ttcaaagacaccggaggagatggacaagactccctctacaagatctgcaaggcttactct
gtttacgatgaggagattggctactgccagggacaatccttcttggctgctgtgctgctg
ctccacatgccagaggagcaagctttcagcgtgctggtcaagatcatgtttgattacggg
ctcagggaccttttcaagcagaactttgaagatctgcattgcaagttcttccaacttgag
aggctcatgcaggaatatataccagacctgtacaaccatttcctgaatgtgggtctggag
gctcatatgtatgcctctcagtggttcctcaccctcttcacagccaaattccctctttac
atggtcttccatatcattgatctgctactgtgtgagggcatcagtgtgatcttcaatgtg
gccttggcgttactaaagacatcaaaagacgatctgatccaaacagacttcgagggtgcg
ctcaaattctttcgtgtcccggttccgaagagataccgctctgaggaaaacgcaaagaaa
ctgatggagctggcctgtagcatgaagatcagccagaaaaagctgaagaaatttgagaag
gagtaccacaccttgagggagcaacaggaacaacaggaggcccccatcgagagatatgag
agggaaaaccgtcgtttgcaagaggctaacatgcgtttggagcaggagaatgacgacctg
gcacatgaactagtcagcagcaagatagccctgcgcaaggacctcgacaacgctgaggag
aaggcagatgccctgaataaagagttgctgctgaccaaacagaaactggtggactccgag
gacgagaagaggcgactggaagaagaatctgctcagctgaaggagatgtgcagacgagag
cttgataagtctgaatctgagataaagaagaacagctcgattattggagaatataagcag
atctgctcccagctgagtgaacgactggagaaacaacagacatccaaccgaggagaactg
gagaaaatccggtcgaaagttgaaggttgtgagaagtgcagtagccttttcaacaaagag
ggtcgtgtgcgggctgctgtgacctcggcaacagctggggggactgaggagactgatgag
gagaaggaggatttgaagaaccagcttagagagatggagctcgaactagctcagaccaaa
ctgcagcttgtggaggctgagtgcaaaattcaggatctggagcaccacctgggtctggcc
ctcaacgaagtgcaggcggccaagaagacctggttcaaccgaacgctcagctctatcaag
accgtcactgggacccagggcaaggagaccacctaa
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