Anoplopoma fimbria (sablefish): 129102725
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Entry
129102725 CDS
T09102
Symbol
myo5b
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vb
KO
K10357
myosin V
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129102725 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129102725 (myo5b)
04131 Membrane trafficking [BR:
afb04131
]
129102725 (myo5b)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129102725 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129102725 (myo5b)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
129102725 (myo5b)
mRNA cycle factors
P-body specific factors
129102725 (myo5b)
Membrane trafficking [BR:
afb04131
]
Others
Actin-binding proteins
Myosins
129102725 (myo5b)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
129102725 (myo5b)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
129102725 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
Ac76
AAA_22
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
129102725
NCBI-ProteinID:
XP_054468959
LinkDB
All DBs
Position
14:660036..690175
Genome browser
AA seq
1845 aa
AA seq
DB search
MSVNELYTQFTRVWIPDPDDVWRAAEIVRDYKEGEPVLHLKLEDETPLEYPVGPKSNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYCGIVLVAINPYDQLHIYG
EEVIRAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSASDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLSLTSAEDFTFTSMGENIFIEGVN
DAEDLEKTKEAFTLLGIKDGSQSSIFKVVASILHLGNIEICAERDGESCHVSRDNLHLKH
FCRLLGVELQQMEHWLCHRKLVTASETYVKNMSTKQAENARDALAKHIYARMFDWIVEHI
NKSLHTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQNSSSAHFQK
PRMSNISFIIIHFADKVEYQCDGFLEKNRDTVYVEQINILKASQFQLVADLFHDKDDVAP
XKSSRVNVRAAKTTPRAPNKEHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDFKEA
FSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYQDFFNRYRVLMKKSDMTSADKKLVCK
NLLEILIKEPDMFQFGKTKIFFRAGQVAYLEKLRADKFRSACIKIQKTVRGWLQRVRYRK
IRKMAVTLQRYGRGYLARRHADFLRQTRAALICQKQFRMVRDRQAYLRVRQAVVTIQAFT
KGMFTRRIYQEFMLHHKAMVIQKTVRGWLQRKKFRRARDAAVTIQCGFRRVRAKRQLQQL
KIEARSAEHLKKLNTGMENKIVQLQRKMDDQSKDLRTQNEQLLQVNTGLGLEMTKLQKQL
EQVKSRQVGGAQIASMQEELERLREELQEALAQRKKMEEEHGTEKMGLQQRVEELEKENA
LLKSEKEEMNQRILQQTKSSGENISDASQKENSLQKEMDAERQRYQNLLKEFARVEQRYD
NLKEEVSLSKFQPGHRRNPSNQSSLESDSNYPSVSTSEVGDTEDSIQEVEEMGVEKAAMD
ISLFMKLQKRVRELEQERKRLQVNLDKMEEMAKRRGSESRSSTSEQEMADLAYNNLKRQE
LESENKKLKNDLNEMRKTIAERASKNNSSNELQDGYNLLLSQLKSANEELDARKEEVLIL
RTQIVSAAQQRENNDQIESSKVPELDNSNEPVDKEEALKAYHGLCESKNTRQDWRYLNED
GELGLAYQGLKQVARLLEAQLQTQSRQHKDELEALHTQIELLRDDIEKKQEILNYTASLS
PEAQVEYSIQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEVSQAAAQT
SRSRPELSRQVTVQRKEKDFEGMLEYYKEDEALLFRTLISDIRPNTVSATVPCLPAYILF
MCIRHADYINDDQKVESLLTSTINAIKKVLKKNNDDFEMTSFWLANTSRLLHCLKQYSGD
EVFMTQNTGKQNDHCLKNFDLAEYRQVLSDLSIQIYQQLIRVAEGILQPMIVSAMLESES
IPSLAGVKPMGYRNRSSSMDTDAGGPSSYTLQALIRQLGQIHSTMQDHGLDPEIVGQVVR
QLFHCINAVTLNNLLLRKDVCSWSTGMQLRYNTSQLEEWLRGNNLFQSKAAAALEPIIHA
AQLLQVKKKTTQDAEAICSLCTALSTQQIVKILNLYTPLNEFEERVTVSFIRSIQNRPQQ
KSDPPQLLMDTKHVFPVLFPYTPSALSLETLHIPASLGLDFLIRV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacgagctgtacacacagttcacgcgggtctggatccccgaccccgacgat
gtgtggagagctgcagagatcgtcagagattataaagaaggagagccggtgctccacctc
aagctggaggatgagacgcctctggagtacccggtgggtccgaagagtaacccccttcct
ttcctgcgtaaccccgacatcctggtgggagagaacgacctcacggctctcagctacctc
catgaacctgcagtcctccacaacctcaaggtccgcttcctggagcccaaccacatctac
acctactgcgggatcgtgctggtggccatcaacccgtatgaccagctgcacatttatgga
gaggaggtgatccgggcctacagcggtcagaacatgggtgacatggacccgcatatattc
gctgtggctgaagaggcctacaagcagatggccagagacgagaggaatcagtcgatcatc
gtgagcggagaatccggagcaggaaagacggtttctgcaaagtacgccatgcggttcttc
gccacggtgggaggctcggccagcgacactaacgtggaggagaaggttctcgcctccagt
cccatcatggaggccatcggaaacgccaaaaccactcgaaacgacaacagcagccgcttt
gggaagtacatccagatcggcttcagcagacattaccacatcatcggagccaacatgagg
acatacctgctggagaagtcccgggtggtgtttcaggctgaagatgagaggaactatcac
atcttctaccagctgtgtgcctccgccagcttaccagagttcaaagacctcagcctcacc
agtgcagaagatttcaccttcacgtctatgggagagaacatcttcatcgaaggagtgaac
gatgctgaagacttggagaagaccaaagaggccttcacactgctggggataaaggacggc
agtcagagcagcattttcaaagtggtcgcctccatccttcatctgggaaacatcgagata
tgcgcggagcgagacggagagtcctgtcacgtctcgagagacaacctccacctgaagcac
ttctgcaggctgctgggggtggagctgcagcagatggagcactggctctgtcacaggaag
ctggtcaccgcgtccgagacgtacgtgaagaacatgtcgaccaagcaggcggagaacgcc
cgcgacgcgctcgccaaacacatctacgctcgcatgttcgactggatcgtagagcacatc
aacaagtctctgcacacctcctccaaacagcactccttcatcggagtcctggacatctac
ggctttgagacgttcgaggtgaacagcttcgagcagttctgcatcaactacgccaacgag
aagcttcagcagcagttcaactctcatgtgtttaagttggagcaggaggagtacatgaag
gagcagatcccctggactctgatagacttctacgataaccagccgtgcatcgacctgatc
gaggcccgactcggcatcctggacctgctggacgaagagtgtaaagtgccgaaggggacg
gaccagaactgggcccagaagctctacaagcagaactccagcagcgctcactttcagaaa
cctcgtatgtccaacatctccttcatcatcatacacttcgctgataaggttgagtatcag
tgtgacggctttctggagaagaacagggacaccgtgtacgtggagcagatcaacatcctg
aaggccagccagtttcagctggttgcagatctgtttcatgacaaggacgacgtcgccccc
nngaagtcctccagagtcaacgtcagagcggccaagacgactccaagggcccccaacaaa
gagcaccggaagaccgtgggacaccagttccgcagctctctccacctcctcatggagacc
ctgaacgctacgactcctcactacgtccgctgcatcaaacccaacgacttcaaggaggcg
ttctcgttcgattccagacgagcggtgcagcagctcagagcctgtggagtcctggagacg
atccggatcagtgcagccgggtatccgtccaggtggacgtatcaggacttcttcaacagg
tatcgagtgctgatgaagaagtccgacatgacgtcagctgacaagaagctggtgtgcaag
aacctgctggagattctgatcaaggagcccgacatgttccagttcggtaagacgaagatc
ttcttccgggcgggacaggtggcgtacctggagaagctccgggccgacaagttccgctcg
gcctgcatcaagatccagaagacggtccgcggctggctgcagagggttcgataccgcaag
atccgcaagatggccgtcacgctgcagagatacggccgaggatacctggcccgcagacac
gctgacttcctgcgtcagacccgagccgccctcatctgtcagaaacagttccgcatggtg
agagacagacaggcttatctgagggtgagacaggctgtggtcaccatccaggccttcacc
aaagggatgttcacccgccggatctaccaggagttcatgctgcaccacaaggccatggtg
atccagaagacggtccgtggctggctgcagaggaagaagttcagacgggcgcgggatgcc
gccgtcacgatccagtgtggcttcagacgcgtcagggccaagagacagctgcagcagctg
aagatcgaagctcgctccgccgaacacctgaagaagctcaacaccggcatggagaacaag
atcgtacagctgcagaggaagatggacgaccagtccaaagatctccgcactcagaacgag
cagctgctgcaggtgaacaccggtttgggcttggagatgaccaagctgcagaagcagctg
gagcaggtgaagagtcggcaggtgggaggagctcagattgcctctatgcaggaggagctg
gaacggctgagggaggagctgcaggaggcgttggcccagaggaaaaagatggaggaggag
cacggcaccgagaagatggggctccaacagagggtggaggagctggagaaagaaaacgct
ctgctgaagagcgagaaagaagagatgaaccagagaattctacagcagaccaagagctct
ggagagaacatcagcgatgcgtctcagaaggagaattctctccagaaggagatggatgct
gagaggcagcgataccagaatctgctcaaagagttcgccagagtggagcagagatacgac
aacctgaaggaggaggtgtctctgagcaagttccaacccggccacaggaggaacccgtcc
aatcagagcagcctggagtcggactccaactacccgtctgtctccacctctgaggtggga
gacacagaggactccatccaggaggtggaggagatgggagtggagaaggcggcgatggac
atcagtctgttcatgaagctgcagaagagagtcagagagctggagcaggagaggaagagg
ctgcaggtcaacctggacaagatggaggagatggccaagcgcaggggctctgagtccagg
agctccacctccgagcaggagatggctgatctggcctacaacaacctgaagagacaggag
ctggaatcagagaacaagaaactgaagaacgacctgaacgagatgaggaagaccatcgct
gagcgtgcttctaagaacaattcctccaatgagcttcaggacggctacaacctgctgctc
agccagctcaaatcggccaatgaagagctggacgctcgaaaggaggaggtcctcatcctg
aggactcagatagtcagcgctgcccagcaacgggagaacaacgaccagatagaaagcagt
aaagttcctgaactggataacagcaacgagccggtggataaagaggaggctctcaaagcg
tatcacggactgtgtgagtccaaaaacacacggcaggactggcgttatctgaatgaagac
ggagagctgggtttggcttaccaaggcctcaaacaagtggccaggctgctggaggctcag
ctgcagactcagagccgacagcacaaagacgagctggaggctctgcacacgcagatcgag
ctgctgagagacgacatcgagaagaagcaggagatcctgaactacacggcctcactgtct
ccagaggctcaggtggagtacagcatccagcaggagatcaccaggctgaccaacgacaac
ctggacctgaaggagctggtggagaaactggagaagaacgagaggaagctgaagaagcag
ctcaggatctacatgaagaaagtccaggagttagaagtgtctcaggctgcagctcagacc
agcaggtccagacctgaactgagccgtcaggtgacggtccagaggaaagagaaggacttt
gaggggatgctggagtactacaaggaggacgaggccctgctgttcagaactctgatctca
gacatcaggccgaacaccgtgtcggccaccgttccctgtctgccggcttacattctcttc
atgtgcatccgtcacgccgactacatcaacgacgaccagaaggtggagtctctgctcacc
tccaccatcaacgccatcaagaaggtcctcaagaagaacaacgatgactttgagatgacg
tccttctggctcgccaacaccagccgtctgcttcactgtctgaagcagtacagcggtgac
gaggtgtttatgactcagaacaccggtaaacagaacgatcactgcctgaagaacttcgac
ctggcggagtaccgacaggtgctcagcgacctctccatccagatctaccagcagctcatc
agggtggccgagggaatcctccaacccatgatagtgtcggccatgttggaaagcgagagc
atccccagcctggcgggcgtgaagccgatgggctacaggaaccgctcgtccagcatggac
acggacgccggcggccccagcagctacaccctgcaggccctgatccggcagctgggacag
atccacagcaccatgcaggaccacggtctggacccggagatcgtgggtcaggtggtgcgg
cagctcttccactgcatcaacgccgtcaccctcaacaacctgctgctgcgcaaagacgtg
tgctcctggagcaccggcatgcagctcaggtacaacaccagtcagctggaggagtggctg
agagggaacaacctgttccagagtaaagctgcagccgctctggagcccatcatccacgcc
gctcagctgctgcaggtcaagaagaagacgactcaggacgccgaggccatctgctcgctc
tgcaccgccctcagcacgcagcagattgtgaagatcctgaacctctacactcctctgaac
gagtttgaggagagagtcaccgtgtcgttcatcaggagcatccagaaccgtcctcagcag
aaaagtgatcctcctcagcttctgatggacaccaaacacgtgttccccgtcctcttcccg
tacacgccgtctgctctcagcctggagacgctgcacatccccgcctccctcggcctcgac
ttcctcatccgggtctga
DBGET
integrated database retrieval system
