Anoplopoma fimbria (sablefish): 129102734
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Entry
129102734 CDS
T09102
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04510
Focal adhesion
afb04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129102734 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129102734 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
129102734
NCBI-ProteinID:
XP_054468968
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Position
14:6352466..6395427
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AA seq
1083 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKSTEKPANKKV
SRLEEHEKDVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARIQHSSA
LSSCHNRVYQSLANLIRWADQVMLDGIDLEDKENVASVTSVIKAVLDGVKELVKLTIEKQ
EQPSPTSPNKPAPPAITAESSASSEMPLVDREQEVSNKTAPAATPAEAASDTPDEDVAPP
KPPLPEAKMAELSPPPALPPKKRQSAPSPTRVAVVAPMSRGSSLPCSVHRQQQDYEQEFL
QRRFSGGSQSYGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQCSRNTSCETLDNTENYD
PDYDFLHQDLSAGENLPPIPVGGCLSPLPESHSESSSPVPGQHPSHPRFSAPPQQQQSEY
WTPQPNQTNPLHSFRVSAPPALPQKKRRSTQTSPFPDAGSRVLYERYPSQYDNLSEEELH
PTPPFPLFTPISPMPQTNGGVFVAQYMAGEHSDVAASPPPLPEKKSRHILQYMQFVEDYS
EPQPSMFYQMPQSESIYEQRNKRFQEVYGFNDSFSSTDSVHEPLLPPALPPKQRQLSESA
NDEGGEGEYVNLYSSSQANGELPLSLRETITADDVLQDPAPQMPSTNSKEALDKERRQKS
TESAGSDEEDVDELSLIDHKEIMSRITLKQESDDGPDVRAGSGDILLVHATETDRKDLVL
YCEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVEL
TEDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQRKLLRYTNSLKPLAARGVSARPG
TLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVR
SLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGL
EEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIEGKVNFSKRWQ
QFNILDSMRRFQQVHYELKRNEDIVCFFNDFSDHLAEEALWELSLKIKPRNITRRKTERE
EKT
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaaaatagagagcaagcaagactcgcagcggtcccatttgtcctctttcacc
atgaagctgatggacaagttccactctcccaagatcaagaggactccatccaagaagggc
aagcaactgcagcccgagccagcagccaagagtaccgagaaacctgcaaacaagaaggtc
agccggctggaggagcacgagaaggacgtggtcagtgctctgcgctacttcaagacaatc
gtggacaaaatggtcgtggagaagaaggtgcttgagatgcttccaggctcggccagcaag
gtgcttgaagccatcctgcctctggttcaggtagaggcccggatacagcacagttcggcg
ctgtcttcctgccacaaccgcgtgtaccagagcctcgccaacctcatccgttgggcggac
caggtgatgctggacggcatcgacttggaggacaaggaaaatgtggcgtccgtcaccagc
gtcatcaaagcagtgctggatggagtaaaggaattggtgaagctgaccatcgagaaacag
gagcagccgtcacccaccagccccaacaaaccagcaccacctgctatcacagcagagagc
agcgcgtcgtcagagatgcccttggtagatcgggagcaggaggtctccaataagacggct
ccggcagctactcccgccgaggctgcctcggacacaccagatgaggacgtggcccctccc
aaaccccccctacctgaagccaaaatggcagagctcagccctccaccagctctcccccct
aagaagcgtcagtcggccccttcgcccacacgggttgcggtggttgccccgatgagccgc
ggctccagcctgccgtgcagcgtccacagacagcagcaggactatgagcaggagttcctc
cagaggcgtttctccggggggagccagtcctacgggggagactccccacgcctgtctccg
tgcagcagcatggggaaactaagcaagtcggacgaacagctctcctccatggagcaggac
agtggtcagtgttcacgtaacactagctgtgagacgctagacaacacagagaattacgac
ccggattacgacttcctccaccaggacttgtcggccggggaaaaccttcccccgataccg
gtaggagggtgcctgagccccctgcctgagtctcacagcgagtcctcatccccggtcccc
ggacagcatccctcgcacccccgcttcagtgctcctccccaacagcagcagtctgaatac
tggaccccgcagcccaatcaaaccaaccccttacattccttccgcgtcagcgctcccccc
gccctcccccagaagaagcgacgcagcacccagacatcgcccttccccgacgcagggtcc
agggtgctgtatgagcgctacccctcccaatatgacaacttgtcggaagaggagctgcac
ccgacgccgccgttcccccttttcacacccatctcacccatgccccagacaaacgggggc
gtgttcgtcgcccagtacatggccggcgagcattcggatgtcgccgccagcccacctcca
ttgccagaaaagaaaagcagacacatcctccagtacatgcagtttgtggaagactactcc
gagccgcagccttctatgttctaccagatgccacagagcgagagcatctacgagcagcgc
aacaagcgcttccaggaggtttacggcttcaacgactccttcagcagcaccgactcagtc
cacgagccgctgctgcctccagcattgcccccgaaacaaaggcaactgagcgagagcgca
aacgacgagggcggggagggggagtacgtcaacttgtactcgtccagccaggccaatggg
gagctgcctctctccctcagagaaacaatcacagctgacgatgtgcttcaggaccccgcc
cctcagatgccatccaccaacagcaaagaggctttggacaaggagagaaggcagaagtcg
acagagtcagcggggagtgatgaggaggacgttgacgagctctccctcatagatcacaag
gagattatgagcaggataacactaaaacaagaaagtgacgacggccctgacgttcgtgct
ggatcaggagatattctattagtccacgctacagaaaccgaccgcaaagatctcgttttg
tactgtgaagcctttctgactacgtataggactttcataacccccgaggacctcattaag
aagctacactacagatacactaggttctgccacagtccggacaccttcaagaaacgagtc
agcaagaacacattcttcgtgctggtccgtgtggtcgatgagctgtgcttggtggagctg
acggaggacatcttgaaacagctgatggacctggtgttcacgctggtgtgcaacggcgag
ctcagcctcgcccgcgtgctccgcaagaacatcctggataaggtggagcagaggaagctg
ctgcgctacactaactccctcaagccactcgctgcccgaggggtctctgcgaggcctgga
actctccatgacttccgcagtcacgagatcgcggatcagctcactcttcttgatgctgag
ctcttctataaaattgagattcccgaggtgctgctctgggccaaggagcagaatgaggag
aagagtccgaacctgactcagttcacagagcactttaacaacatgagctattgggtccga
tctttgataattcagcaggagaaagctcaagacagagagaagctgcttctcaagttcata
aagataatgaagcacttaagaaagttgaataatttcaactcctacctggcaatactatcc
gctctggactccgcccccatcaggagattggagtggcagaaacagacctcagagggattg
gaggaatattgtacgttgattgacagctcttcgtccttcagagcctacagagctgctctg
gctgaggtggagcctccatgcatcccgtacctgggcctcattctgcaggacttgaccttc
gtccacctggggaaccctgacctcattgaggggaaggtcaacttctccaaacgctggcag
cagttcaacatcctggacagcatgcggcgcttccagcaagtgcactatgagctgaagcgc
aacgaagacatcgtctgtttcttcaacgacttcagtgaccacctggcggaggaggccctg
tgggagctgtcgctaaagatcaagcccaggaacatcaccaggcgcaagacggaacgcgag
gagaagacctag
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