Anoplopoma fimbria (sablefish): 129102796
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Entry
129102796 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129102796
04020 Calcium signaling pathway
129102796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129102796
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129102796
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GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129102796
NCBI-ProteinID:
XP_054469040
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Position
14:complement(12719706..12735166)
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AA seq
1230 aa
AA seq
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MTEVTLPIPVQAGPRPACFSTEKEQLPYPALAPEIVDSFVLVYFVLEMLIKMLAKGGYGY
EGSYLSNPWNKLDLFINSVEMFDYFLVYLGLHLPVCQVLAPMRLISRVTSMRDVVTVLLD
ISPMLVNVLILYLFVIHIFAVMGVQLWAGQLRNRCFLGENITKYNVSLDSFYMTKYDEQY
PFICSPEGMNGMRRCHDVPPYKENGRKCSLNPPQRASGGAIVPTAAGADANACVNWNLLY
NVCRSGDHNPHKGAINFDNIGYSWITIFQVVTLEGWSNVMFNVMDVYSFWSFLFFMLVTI
MGSFIMMNVCAVVIATQFSDNLGRRQETRAAGEQRAPCLSRGSVGGQIWRPFRARLERVI
KSTVFDRMIMFAVLLSILTMAIEHHKQPKKLTEMLRLTNNIFTGIFVVEMVLKLMGLRWT
YFKSRNNLFDFFIVIISLWETISKADGRLSVLRAFRLLRFGRLLHFLPYLKKQLLVLKRA
MEDAAPLCLIMLFVIFIYSLIGMLLFGNRFDFRTLDGHTDRKNFDTLLWSMVTVFQILTG
EDWNLVLYNIMAATSPWAAIYFVALIMTGRHVLLNILVGIVIQGFHNRAHDSSQSPRSSP
PISAPKEGSAPTNTNNRCLKRIRRALRWCKEHEEWSFYVFSPQNRFRIFCQRVISHKMFD
YTVLLFILLNCVTIAMERPGIDPGSKEKLFLKMSSYVFTAVFLVEMLFKVLALGLLFGSE
SYCRSSWNVVDGLLVILSFFHILISLASSGNNKMLGIVKVLRLLRTFRPLRVIKRAPKLK
LAVEALIASIKPIGNVLLICCAFFFFYAILGVQLFKGKFHTCVGEDIELIINKTDCLSAN
YRWERKHFNFDSLSQALLSLFVMYSMDGWVNIMYDGLDAVGVDKQPVMNHNQWMLLFFIP
FMIMSFFLLDMFIGVMVETFHQCQQNQKRGDEEERIVSQGTVQGKERGGGSLLRPYYESY
SRVRRSIHTLCVSSFLDLFMAVIIFMSVLVMAVEHYDQPLFIWKLTEYSHYVFTIILIIE
VLLKLVAFGGLRFMQNSWNVLDVGVVLVSLMSIVLHEMRMADVFPINPSILRVCRVLRLA
QVLKAKKIRVLLKTVIKTLSQVGNICLLFTFFFFIYAALGVELLGKLECVDEDLCLGINE
YVNFKHFGMALLTLFQVCTGDNWSLIMKDALTQCRPGDKGCLDYLSWVTPIYFIAFVVMA
QFVLANLVVAVIMQAMDDSNEVQEENNARR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggtgacgctccccatacctgtgcaagcaggtcccaggccggcctgcttctcc
acggagaaggagcagctgccgtacccggctctggccccggagattgtggattccttcgtc
ttggtgtattttgtcctggaaatgctcatcaagatgttggccaagggaggctacggctat
gaggggagttacctcagcaacccctggaacaaattggaccttttcattaactctgtagag
atgtttgactacttcctggtttatctcggcctccacttgccagtctgtcaagtactcgcg
ccgatgcgactgatcagcagagtcacaagtatgcgtgacgtggtgacggtgctcttggac
atctcgcccatgcttgtgaacgtgctgatactctacctgtttgtcatccacatcttcgcg
gtaatgggagtccagctttgggcggggcagctgcgcaaccgatgcttcctgggagagaac
atcacaaagtacaacgtgtccttagattcattctacatgaccaagtacgatgagcagtac
ccgttcatctgctcccccgagggcatgaacgggatgcgccgctgccacgacgtgccgccg
tacaaagagaatggccgaaagtgctctttaaaccccccccagcgtgcgtcgggtggtgcg
atcgtccccacagcggctggagccgacgccaacgcctgtgtcaactggaacctgctctat
aacgtctgtcgttccggggaccacaaccctcacaagggagccatcaactttgacaacatc
ggctattcctggataaccatattccaggttgtcacactggaaggatggtcgaacgtcatg
tttaatgtcatggatgtgtattccttctggagttttctctttttcatgctcgtcaccatt
atgggctccttcatcatgatgaacgtgtgtgcggtcgtcatcgccacccaattctcggac
aacttgggaagacgtcaggagaccagagcagcaggagagcagcgggcgccgtgtttatca
cgtggctctgtcgggggtcaaatttggagaccattcagggcgagactggagagagtcatt
aaaagtacagtctttgaccgaatgatcatgttcgccgttctcctcagtattctcaccatg
gccatagagcaccataaacagccgaagaagttgacggaaatgttgcggctcactaacaac
atcttcaccggtatctttgtggtggagatggtcttgaagctgatggggctcaggtggaca
tacttcaagagccggaacaacttgtttgactttttcatcgtcatcatcagcttgtgggag
acaatatctaaagcggatggccggttgtcagtcctccgagcgtttcgtctgctgcggttt
gggaggctgctccacttcctgccttacctgaagaaacaactgctggtgctgaagagggcc
atggaggacgccgctccgctctgcttgataatgctgtttgtcatcttcatctacagtctc
attggcatgctcctgttcggtaatcgattcgacttcaggactctggacggacacactgac
agaaaaaactttgacacgctgctctggtccatggtcactgtgttccagattctgactggg
gaggactggaatctggtgctgtacaacatcatggcagccacctctccatgggcagccatt
tactttgtagcactcattatgactggaagacacgtccttcttaatatcctcgtaggcatt
gtgattcagggcttccacaacagggcccacgactcctctcagtcccccaggtcctctcct
cccatctcagcccccaaggaaggttctgcacctacaaataccaataatagatgtctgaag
cggatccggagagcactccgctggtgcaaagagcatgaagagtggtcattctacgtgttt
tctccacagaacaggttccgcatcttttgccagcgtgtgatctctcacaagatgtttgat
tacacagttcttctcttcattctcctgaactgtgtcaccattgctatggagagacctgga
atagaccctggaagcaaggagaaattgttcctgaagatgtccagttacgtattcactgct
gtcttcctggtagagatgctttttaaggttctggctcttggtttgctgtttgggagcgag
agctactgccggtcgtcctggaatgtcgtggacggtttgttggtgattctctcgttcttc
cacatcttaatctctctggccagttcgggcaacaataaaatgctgggtatcgtcaaagtg
ttgcgcctgctgcgcacgtttcgccctctgagggtgatcaagcgagctccgaaactgaag
ctggctgtggaggctctgattgcgtcgatcaagcccatcgggaacgtccttctcatttgc
tgcgccttcttctttttctatgcaatccttggcgtgcagttgttcaagggaaagttccac
acctgtgtgggcgaggacattgaactcatcatcaacaagacggactgtctgtcggccaac
tatcgctgggagcggaagcacttcaactttgacagcctgtcgcaggctctgttgtcgctg
ttcgtaatgtactccatggatggctgggtgaacatcatgtatgatggactggatgctgtg
ggagtggacaaacagcctgtgatgaaccacaaccaatggatgctccttttcttcatcccc
ttcatgattatgagcttctttctgctggacatgttcatcggtgtgatggtggaaaccttc
caccagtgtcagcagaatcaaaagagaggcgatgaagaagaaagaatagtatcgcaaggc
acagttcaaggtaaggagcggggggggggctcgttgctgaggccgtactacgagtcctac
tcccgcgtgcgtcggtccatccacactctgtgtgtcagcagcttcctggacctcttcatg
gctgtcatcatcttcatgagcgtcttggtaatggctgtcgaacactacgatcaacctctg
ttcatatggaagcttacagagtattcccactatgtgttcaccatcatcctgatcattgaa
gtcctgctgaagctcgtggcgtttggcggactgaggttcatgcaaaacagttggaatgtg
ctggatgtcggtgtcgtcttggtttccctcatgagcatcgttttacacgagatgaggatg
gcggacgtgtttcccatcaatcccagcatcctgagagtctgccgagtgctcagactggca
caagtgctgaaggccaaaaagatacgcgttctgctgaaaacggttatcaaaacgctgtcg
caggtcggaaacatttgtctcctcttcacctttttctttttcatctacgctgcgctggga
gtggagctcttgggcaaactggaatgcgtggacgaagacctttgcctgggcataaatgag
tacgtcaacttcaagcactttggcatggccctgctcacgctctttcaggtgtgcaccggg
gacaactggagcttgatcatgaaggacgccctgacgcagtgtcgtcccggagacaagggc
tgcttagactacctctcatgggtcaccccgatctacttcatcgcctttgtggtcatggcc
cagtttgtgctggcaaacctggtggtggcggtgatcatgcaagccatggatgacagcaac
gaggtacaggaggaaaataatgcaagacgctga
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