KEGG   Anoplopoma fimbria (sablefish): 129102877
Entry
129102877         CDS       T09102                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    129102877 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:afb01009]
    129102877 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afb03400]
    129102877 (pnkp)
Enzymes [BR:afb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     129102877 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     129102877 (pnkp)
Protein phosphatases and associated proteins [BR:afb01009]
 HAD phosphatases
  Other HAD phosphatases
   129102877 (pnkp)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     129102877 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6 MeaB
Other DBs
NCBI-GeneID: 129102877
NCBI-ProteinID: XP_054469171
LinkDB
Position
1:5471108..5479982
AA seq 607 aa
MSCALVGPSGAPVSLEDGRAVILGRGPETGVTDKKCSRHQVKVVAHYADQDVVVTQLGPN
PSFLDGEKLGRSQSGKLTHGGTLFLVNQSHPFKLHYTLRSNGAAPSAAQKGLKATDKTKG
GRNGKEKEAQSSPIPKRSLKDFFPTSPKKSSKRQLSPERGHPEVKRQRRDEEASDGRVKD
EDDDEEEERMAEEKLKQLQQLAEKSMTERSNSTQPSSSSSSSKECLKSSWQQIGSLMLYT
AAGVKGSEKIAGFDIDGCIITTKSGKVFPTAPDDWKILYPEIQPRLANLLKKGYKVVFFT
NQMGISRGKLRPEVFKSKVEDILATLKLPVQVFISTSPGMYRKPVMGMWNHLCEKANDDV
PVDKTQTLYVGDAAGRPENWAPGRKKKDFSCSDRLFALNIGVQFHTPEEYFLGWKSAPYS
LPQFDPRKMDSTARLFDPPSASLTSGTTEVIVAVGFPGSGKSTFFHAHVIPKGYVYVNRD
TLGSWQSCVSACERALKEGRSVAVDNTNPDLDSRKRYVDVAKAAGVQCRCFHFSASLDQA
KHNNRFREMAPSNSKHLKVNDMIYHSYKKHFVAPALQEGFSEVLQIHFVPNFKDSQSEIL
FRQFSEG
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtcgtgtgcgctggttggcccctctggagctccagtctctctggaggacggacgagcc
gtgattctgggccggggtccggagaccggtgtcaccgacaagaagtgctccaggcaccag
gtgaaggtggtggctcactatgcagaccaggatgttgttgttacccagttggggcccaat
cccagtttcctggacggtgagaagctaggacggagccagtctggtaaactcacccatgga
ggcaccttgttcctggttaaccagagccacccgttcaaactgcactacactctgagatca
aacggagcggctcccagcgctgcacagaaaggcctgaaagccaccgataagacaaaggga
ggcagaaatgggaaagagaaagaggcacagtccagtccaattcccaagcgcagtttaaag
gatttctttcctacctctcccaagaagtcatctaaaagacagctgagtccagagagggga
caccctgaggtgaagcgccaaagacgagacgaggaggcctcagacgggcgagtgaaggac
gaggatgatgatgaagaagaggagagaatggcagaggaaaagctcaagcagctgcagcag
ttggcagagaaatctatgacagagaggagtaacagcacccagccttcatcatcttcatcc
tcttcaaaggagtgtctgaagagcagctggcagcagatcggcagcctgatgctttacacg
gctgctggagtcaaagggagtgaaaagattgctgggtttgacattgatggctgcatcatc
actaccaagtctgggaaagtctttcccactgcgccagatgactggaagattctgtatcct
gagattcagcccaggctggctaacctgctcaagaaaggatacaaggtggtgttcttcacc
aaccagatggggatctctagaggaaaactgagaccagaagtctttaaatccaaagtggag
gacatcctcgccacgctgaagctacctgtgcaggtgttcatatcaaccagtcctggtatg
tacaggaaaccggtgatgggaatgtggaaccacttgtgtgagaaggcaaatgatgacgtt
cccgttgacaagacacagactctttatgtcggagatgctgcgggcaggccggagaactgg
gctccaggaaggaagaagaaggatttctcctgcagtgacagactgtttgctctgaacatt
ggagttcagttccacaccccagaggagtacttcctgggctggaagagcgccccctacagc
ctgcctcagtttgaccctaggaagatggactccaccgcccggctgttcgaccctccgtct
gcctctctcacctccggcacgacagaagtcatcgtcgccgtgggtttccctggttctggt
aaatccaccttcttccacgcccacgtcattcccaaaggctacgtgtatgtcaacagggac
acactcggttcatggcagagctgcgtttcggcatgtgagcgtgccctgaaagaaggccga
agcgtcgccgtggacaacaccaacccagacctagattctcgcaaacgatatgtggacgta
gccaaggcagcaggagtgcagtgtcgctgtttccacttctccgcctctctggatcaagcc
aagcacaacaacagattccgtgagatggctccatcgaacagcaaacacctcaaggtcaat
gacatgatttaccacagctacaagaaacactttgtggctcctgctctccaggagggattc
tccgaggtcctccagatccactttgtcccaaacttcaaggacagccaatcagaaatcttg
ttccggcagttttctgagggctga

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