Anoplopoma fimbria (sablefish): 129102896
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Entry
129102896 CDS
T09102
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
afb03012
]
129102896 (dhx29)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129102896 (dhx29)
Translation factors [BR:
afb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129102896 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
HA2_C
DEAD
DSRM_DHX29
AAA_22
HA2_N
nSTAND3
nSTAND1
AAA_16
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
129102896
NCBI-ProteinID:
XP_054469162
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All DBs
Position
14:complement(11895728..11905465)
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AA seq
1372 aa
AA seq
DB search
MGGKKKKSAEQAAPPAAPSAAAAAAAGKTGAAAAEEPKKQPANNKPAKPAKENKSKAPKT
YSLANTAQVDTGGVTDKSILKVAIQAELEKKIIKLINDFREENGDKGPISGRLTNKKLLD
LYTALQKFNFKREHIEEAMKSSVLYGGDLHSALDWLCLNLKDDELPEGFTQQMQEESHRS
RPKFQPPPPEKPAAQSPKAPSNNHREPTKAAEKDEAASMKDWILRYAEQSSDEEEEEEVG
MKTRNPELEEKFDPNDRYLALTAQLYDAKEMAAVAKTKGDKAGQRMAQDRIRIIQQEMKP
LESHPVFNPALKVVDVPQKEKKILPVSDDKEDLSFKLFEQTEKAPPTAKAPVVKKNEPKD
IRNFDYTARSWTGKSPKQFLIDWVRKNLPKSPPPAFHKVAAGKYWRSKVRVQRAEDVLEV
CPTILTEDSMQAQHLAATLALYTLIKGQSVHQLLPPTYRDVFLEWRDSDQQQREENRTAA
NKPRDQFISRLLTRLKQQQQKENQSRESESQGQLGQGGDGDEEPEESWENLAGLDIGEGV
QELEDKSEKRGRGEGALQASRELLMKLKKSPLAHKLKAQREQLPVFQHRHRVLEALQRHP
VVVVAGETGSGKSTQIPQFLLEELLTGGTEAKPCNIVVTQPRRISAMSLACRVSEEMGCE
DGPGSKSSPCGYQIRMENQSGDWTRLLYCTTGVLLRKLQHDRHLSSLTHIIVDEVHERSV
QSDFLLTILKDVVMRRSDLQLILMSATVDCCKFSNYFNRCPVISIPGRTFPVEVFHLEDI
VEQTGYVLEKDSEYCQKILEDEEEVSISISQKGGKTSQHQEVILRDSSSGWDLGPDLDHF
SSRTRQVLQYMNPNKINMDLMVDLIDYLDKSPQFAVLDGAVLVFLPGLAHIQQLHDLLSS
DKRFRDKNRYRIVALHSTLSSKDQASAFTVPPAGVRKIVLSTNIAETGVTIPDVVFVIDT
GKTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRHGFCFRLYPKFRFNAFMDYSIP
EILRVPLEELCLHIMKCQYGSPEDFLSRALDAPQPQSVSNAINLLRKIGACHPDNHLLTP
LGHHLAGLPVNVKIGKMLIYGAILGCLEPIATIAAAISEKSPFSTPMNRKEEANLAKAAL
ALANSDHLTIYSAYLGWKNSQTDGQRAEMSFCRKYFLNRTALITIESVKHELMRMMEQAG
FWSCRSKPQATALSKPQISVLNAVLAAGLYDSVARVLCTPSVDVLERVVCQVETPQGKAQ
VHPSSVNRNLQTHGWLLYQEKVKYTKIYLRDTTLISPFPMLLFGGDIDIQHRERLISLDG
WIHFQAPVRIGVIFKHLRKLMDSLLEKKLENPRMSLEGERTIQMILDLIKSE
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggggggaaagaagaagaaatcggcggagcaagcggctcctccagcggccccatcagca
gcagcagcagcagcagcgggcaagactggtgcagctgcggcggaagagccaaagaaacag
ccggccaacaacaagccggctaaaccagccaaagaaaacaagtcaaaagctccaaagact
tacagtcttgccaacactgcccaggtcgacacaggaggagtcacagacaagtcgattctt
aaagttgctatccaagctgaactagagaagaagatcatcaagctgatcaatgacttcaga
gaggagaatggggacaaaggccccatatccggcagacttaccaacaaaaagttgctggat
ctgtacacagctctgcagaagttcaactttaagagagagcacattgaggaggcgatgaag
agtagtgtgctgtatggaggggatctccactctgctctcgactggctctgcctcaacctt
aaagatgatgagctgccagaaggttttacccagcagatgcaagaggagagtcataggagc
cggcccaagttccagcctcctcctccggagaaacctgcagcccagagccccaaagcaccc
agcaacaaccacagagagcccaccaaggccgcagaaaaggatgaggctgcaagcatgaag
gattggatcttaaggtatgcagagcagagcagtgatgaagaggaggaagaggaagtaggg
atgaagacacgcaatcctgaactggaggagaagtttgatccaaatgacaggtatttggcc
cttactgctcaattgtatgacgcaaaagaaatggcagctgttgccaaaacaaaaggagac
aaggcgggccagaggatggctcaggacaggatacgcatcatacagcaggaaatgaagcca
ctggagtcccaccctgtgttcaatccagctttaaaggtggtagacgtgcctcaaaaggaa
aagaagatccttccggtcagcgatgacaaagaggatctcagtttcaaattatttgaacaa
actgaaaaggcccctcctacggcgaaagctccggttgtgaaaaagaatgagccaaaggac
attcgcaattttgactacactgctcgcagctggacaggaaagtctcccaaacagttcctc
attgactgggttcgaaagaatctgcccaagagtccaccaccggcttttcacaaggtcgct
gctggtaaatactggagatccaaggtgcgtgtgcaaagggctgaagatgttcttgaagtt
tgtccaacaatcttgaccgaggacagcatgcaggcacaacatctggcagccacactggca
ctctacaccctgattaaaggacagtcggtgcaccagctccttcctccaacctacagagat
gtgttcttggagtggagagacagcgaccagcagcaacgggaagagaatcgcactgctgcc
aacaaacctcgagaccagttcatctcccggctcctgaccagactcaaacagcagcagcag
aaggagaaccaaagccgggagtctgaatcccaaggccagctggggcagggcggtgatggg
gatgaagagcctgaggagtcctgggagaacctggctggtcttgatattggggagggagtt
caagaactggaggacaagagtgagaaaagagggaggggggaaggggcactccaggcgtcc
agagagctcttaatgaagctgaagaagtccccactggcccacaaactgaaggcacagcga
gagcagcttcctgtcttccaacaccggcatcgtgtcctggaggctctgcagcgccaccct
gtggtggtggtggctggtgagacgggcagcggaaagagtacccagattcctcagttcctc
ttggaggagctgttaacgggaggcacagaggcgaagccctgcaacatcgtggtgacccag
ccccgcaggatctctgccatgagcctggcctgcagggtcagcgaggagatgggctgcgag
gatggcccgggatcgaagtcgtcgccgtgtggataccagatccggatggagaatcagtct
ggggactggacccgcctgctgtactgcactactggagtcctgctcaggaagctacagcat
gacagacacctcagctccctgacgcacatcattgtagacgaggtccatgagcgcagtgtc
cagtcggacttcctgctaaccatcctgaaagatgttgttatgaggagatcagacctgcag
ctgatcctcatgagcgccacagtggactgttgcaagttctccaactacttcaaccgctgc
ccagtgatcagcattcctgggaggactttccccgtggaggtgttccacttagaagatata
gtggagcagacggggtatgtcctggaaaaggactcagagtactgccagaaaattcttgaa
gacgaggaggaagttagcatctctatctcacagaaagggggcaaaacctcccagcaccag
gaggtgatattgagggactcctcctctggctgggacctgggtccagatctcgaccacttc
agcagcaggactcggcaggtgctgcagtacatgaaccccaataagatcaatatggactta
atggttgacctcatcgactatctagacaaatccccacaatttgcggtgctggatggagcg
gttctcgtgttcctcccgggtctggctcacatccagcagctccacgacctgctctcctct
gacaagaggttcagagacaaaaacaggtacaggatcgttgctctccactccactctctca
tcaaaggaccaggcttctgccttcacagtgccacctgctggagttagaaagattgtcttg
tcaactaacattgctgagacaggtgtgactattcccgacgttgtgtttgtcatcgacact
ggaaagactaaagaaaataagtaccatgagagcagccagatgagttccctggtggaaact
tttgtttccaaagcgagcgccctccagaggcaggggagagcaggacgtgtccgacacggc
ttctgcttcaggctctatccaaaattcaggtttaatgccttcatggactactccattcca
gagattctacgggtcccactggaggagctctgccttcatatcatgaaatgtcagtacggc
tccccggaggactttctgagccgggccctggatgctcctcagccccagtcggtcagtaac
gccatcaacctcctgaggaagatcggtgcgtgtcacccagacaatcacctcctcacccct
ctgggacaccacctggcaggtctccccgtcaatgtgaagattggcaagatgctcatctat
ggagcaatcctcggctgcctggagcccatagcaaccattgcagcagcaatctcggaaaag
tctcccttctctacaccaatgaacaggaaggaggaagccaacctggccaaagccgccctg
gcattggccaactcggatcacctgacgatatatagtgcatatctggggtggaagaactca
cagactgatggacaaagagcagaaatgtccttctgtaggaaatacttcctcaatcgcaca
gctctcattacaatagagagtgtgaagcacgagctgatgaggatgatggaacaggcaggt
ttttggtcgtgtcgctccaagccacaggcgacggcgctgtccaagccccagatctccgtc
ctgaacgcagtgctggcggcgggactctacgacagcgtggcacgggtcttgtgcaccccc
tctgtggatgtgctcgagcgagtggtctgccaagtggagacgccccaaggcaaggctcag
gtccacccctcatctgttaaccgcaacctgcagacacacggctggctgctgtaccaggag
aaggtgaaatacacgaagatctacctgcgcgacaccaccctgatatctcctttcccaatg
ctgctgttcggaggcgacatcgatatccagcacagagaaaggctcatctcactagatgga
tggatccacttccaggctcctgtacggattggtgtgatcttcaaacacctgaggaagctg
atggactctttgctggaaaagaagctggagaacccgaggatgagcctcgaaggtgagagg
accatccagatgattctggatctgatcaaatcagagtga
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