Anoplopoma fimbria (sablefish): 129102901
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Entry
129102901 CDS
T09102
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129102901 (sbno1)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129102901 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
PLAC9
Motif
Other DBs
NCBI-GeneID:
129102901
NCBI-ProteinID:
XP_054469168
LinkDB
All DBs
Position
14:2530221..2549520
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AA seq
1410 aa
AA seq
DB search
MRIYCEMDPGQDLLLAALSESGICPNDIGFFDVDSQDAAQPSTTQQSISISALDVGVGTE
SVGVVRTEPQAPVPIVTIRHKPQPSTTTFVLNQLNQLPSLGANVTKQSVTNPIKHTITVT
KVVHVANSALRGCSSPSSTNIPSSASTVVPSNRDQQIQLKDLLRSSNVKSTGLKGNSLME
LMRLKPPTNIAPPVATATATGEMNNGIKKEVLGKDAARIWINEDMKMQTFPHSLKIPGMK
EEDEPEEEEEDELGHAETYAEYMPMKLKIGQRHPDPVVETSSLSSVNPPDVWYRLSISEE
TIDRGCLSALQLEAITYAAQQHETFLPSGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGR
KRSLWFSVSNDLKYDAERDLRDIGAKSIQVHSLNKFKYGKITSKHNGSVKKGVIFATYSS
LIGESQSGGKYKTRFQQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQ
NKLPKARVVYASATGASEPRNMAYMNRLGIWGHKTPFREFGNFIQAVERRGVGAMEIVAM
DMKLRGMYIARQLSFTGVTFKIEEVPLTQKYIHMYNKSVRLWVSARERFQQAANLMDAEQ
RMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVQNGKCVVIGLQSTGEARTLEAL
EEGGGELNDFVSTAKGVLQSLIEKHFPAPDRQKLYSLLGLDLPVKKTPSPIETPAQLEQK
GKKRKGSEVKKQQQKKKPRKHGGLSGTSSEESQSEDSDRESGKDSDDSFKSISSGDEDDD
FNPFRDESGDDGEDDPWLIRKEPKKGKEKKKKKRRGSIDPDSIQSALLASGLGSNRPAFT
APVIPPSAPVIVKAEIQDSCLTSQDAVEHAQKMKKELLEKLEDLAEDLPPNTLDELIDEL
GGPENVAEMTGRKGRVVSNDDGSITYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEA
ASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAG
EQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVKLDSPLV
PPPAHFKGDFFREIQIGLIGVGLINVEDRSGAMSLDKDYNNMGKFLNRILGMEVQQQNAL
FQYFSDTLAAVIQEAKKSGRYDMGILDLGSGDEKVKKVDCRKFLTPGYTTAGHVELYTVS
VERGMSWEEATHAWADQSGADDGFYVQMRNNKKTAILVKEVNTKKRLFLVYRPNTGRQLK
LETYTDIKKKFKKVLSEDAKQHWIDQYKSSAKICSHAYWRGNCKKASVGLQCEVGLRCRT
YYVLCGSVLSVWNELEEVLTPVSGTNVKVQIVRLRTEDGQRIVGLIIPANCVSPLSNKLS
TSDQCQQLAVQELQKRQQLHPQSLCHAPNT
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgaggatatactgcgagatggatcctggacaggatttacttctcgctgccctgagcgag
agtggcatttgtccaaatgatattggcttctttgatgttgattctcaggatgctgcacag
ccctctacaacccagcaatctatctccatcagtgccctggatgttggcgttgggacggag
tcagtgggagttgtacgaactgagcctcaagctccagtccctatagttactatcaggcac
aaacctcagccatcaaccaccacgtttgtcttaaatcagctgaatcagttgccgtcactc
ggagctaacgtgaccaaacaatccgttacaaaccccatcaaacataccataactgtcacc
aaagtggtccatgttgccaattcagccctgcgaggatgttcgagcccctcctccacaaat
attccttcgtcggcgtccacagtagtgccttcaaacagagatcagcagattcagttgaaa
gacctccttcggtccagcaatgtgaagagcaccggtctaaagggcaacagtctgatggag
ctcatgaggttaaagcctccaactaacatcgctccaccagtagcaacggcaacagccaca
ggtgaaatgaacaatgggatcaagaaggaagtgttgggtaaagatgctgccaggatctgg
atcaatgaagacatgaaaatgcaaaccttccctcattctctgaaaatcccagggatgaag
gaggaggatgagcccgaggaggaagaggaagatgaactgggccacgctgagacttatgca
gagtacatgccaatgaaattgaagattggccagcggcatcccgacccggtggtggagacc
agctccctgtccagcgtcaaccctccggacgtgtggtacaggctgtccatctcagaggaa
accatcgatcggggctgcctgtcggcgctgcagctggaggcaataacgtatgctgctcag
caacatgagacattcctccccagcggtgatcgcgctgcttatttaatcggagatggagct
ggtgtggggaaaggccggaccattgcagggatcatctacgagaattaccttttaggcagg
aagagatctctttggtttagtgtctcaaacgacttgaagtatgacgctgaaagggattta
agggatataggagccaaaagcatccaggttcactcgctgaacaagttcaagtatgggaaa
atcacctctaaacacaatgggagtgtgaagaaaggtgtgatattcgccacctactcttcg
ttgataggagagagccaatcaggagggaagtacaagaccagattccaacagctcctccac
tggtgtggggaggactttgatggagttattgtgtatgacgagtgtcacaaagccaaaaat
gtgtgtccaatcggttcgtccaaacctacaaaaactgggcttgcggtgttggaactgcag
aacaaactccccaaggctcgggttgtgtatgcaagtgctacaggtgcttctgaaccgcga
aatatggcctacatgaatcgtctgggcatctgggggcataaaacacccttcagagaattt
ggcaactttatccaagccgtagagcgcagaggtgttggcgccatggagatagttgctatg
gacatgaaactaagagggatgtacattgcaaggcagttgagttttacaggtgtgactttc
aagattgaggaggttcccctgactcagaaatacatccacatgtacaacaaatctgtgaga
ctgtgggtgagtgcacgtgagaggttccagcaggcagcgaacctgatggacgcagagcaa
cgcatgaagaagtccatgtggggccagttctggtccgctcaccagaggttcttcaagtac
ctctgcatcgcctccaaagtccgccgggtggtgcagctggccagagaggaggtccaaaat
ggaaagtgtgtggtcatcggccttcagtccactggagaagcaagaactctggaggccttg
gaggaaggaggaggagagctcaacgactttgtctcaactgcaaaaggtgtgctgcagtcc
ctgattgagaagcactttccagctcctgacagacagaagctttacagcctgctcggcctc
gacctcccggtgaagaagaccccctctcccattgaaacgccagcacagctagaacagaag
ggcaagaagaggaaagggtcagaggtaaaaaagcagcagcagaagaagaaacctcgcaag
cacggcggtctgtcgggcaccagctcggaggagagccagtctgaggattcggacagagag
tccggtaaagacagcgacgacagcttcaagtctatcagctcaggagacgaagacgatgac
ttcaaccccttcagagacgagtcgggcgacgacggggaagacgatccgtggctaatcaga
aaggaaccaaagaaagggaaagagaagaagaagaaaaagaggagggggagcatcgatcca
gactccattcaaagtgccttgttagcatctggactgggctccaacaggcctgctttcact
gcccccgttatcccccccagcgcccccgtcatagtcaaggcagagattcaggatagctgc
ctaacaagtcaggacgcagtggaacacgctcagaaaatgaagaaagagctactggaaaaa
ctcgaggatctagctgaggatctacctcccaacactctggacgagctgatagatgagctg
ggaggacccgagaacgtagctgagatgacaggccgcaaaggtcgtgtggtcagcaacgac
gacggcagcatcacgtacgagtctcgctctgagctggacgtcccggtggaaatcctcaat
ctcacagagaagcagaggttcatggacggagagaagaacatagccatcatctcggaagct
gccagctcgggtatttccctgcaggccgatcggcgggtgaagaaccagcggcggagagtc
cacatgacactggagctcccgtggagcgccgacagagcgatacagcagttcgggagaact
cacaggtcgaaccaggtcacagctccagaatatgtcttcctcatatcggagctcgcagga
gagcagaggtttgcatccatcgtcgccaaaagattagaaagcctgggcgctctcacacac
ggagacagaagagcgacagaaactcgagatctcagcaggtttaattttgacaacaaatac
ggcagaaacgctctggaaattgtaatgaagtcgatcgtaaagctcgattctccgttagtg
cccccacctgctcactttaaaggagatttcttcagagaaattcagatcggattaataggt
gtgggcctcataaacgtggaggacagatctggtgccatgtcactggacaaagactacaac
aacatggggaagttcctgaaccgtattctgggcatggaggtccagcagcagaatgccttg
ttccagtatttctctgacacattggcagccgtgattcaggaagccaagaagagtggcaga
tacgacatgggcattctggatctgggctccggagatgagaaggtgaagaaggtagactgc
aggaaattcctaacgccgggctacaccacagcaggacatgtggaactctacaccgtgagt
gtggagagggggatgtcgtgggaggaagccacgcatgcttgggcagatcagagcggagca
gatgatggtttctatgttcagatgaggaacaacaagaaaacggccatcctggtcaaagag
gtgaacactaagaagaggctcttcctggtttacaggccgaacaccggcagacagttaaag
ctggagacgtacactgacatcaagaagaagttcaaaaaggttttgtccgaagacgccaag
cagcactggattgatcagtacaagtcgtcagcgaagatctgctctcatgcttattggcga
ggtaactgcaagaaggcgtcggtgggtctccagtgtgaagtgggtctgcggtgtcggacg
tactacgttctgtgcggctcggtgctcagcgtgtggaacgagctggaggaggttctcact
ccggtcagtggaaccaacgtgaaggtgcagatagtccgactccgaacagaagacggacag
aggatagttggactgatcattccagcgaactgcgtgtctccgttaagtaacaagctctcg
acgtcggaccagtgccagcagctcgccgtgcaggagctccagaagcgccagcagctccac
ccccaaagtctctgtcatgcacccaacacatag
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