Anoplopoma fimbria (sablefish): 129102973
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Entry
129102973 CDS
T09102
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129102973 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129102973 (capn3a)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
129102973 (capn3a)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C2: calpain family
129102973 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
129102973
NCBI-ProteinID:
XP_054469180
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All DBs
Position
15:3165071..3178613
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AA seq
713 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPLRFNGQDFNSLRQECLQGKSQFEDESFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMMKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKSSQHKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWATLSKTEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVGCTFVVAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLTPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASAGEES
EEDQQFRTIFQEIAGDDMEITANELKNVLNRVITKHKDLNTEGFSLESCRSMIALMDMDG
TGRLNLQEFRHLWNKIKQWQGIFNHYNAEQTGSINSYEMRNAVNDAGFRLNNQLYDIITM
RYANEGMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtctggctttttctgtgaccggttgatccgggaacgagagcggagg
gacggggaagggtccctgaacaagccgctccgcttcaacggacaggacttcaactcgctg
aggcaggagtgtcttcaggggaagtcccagttcgaggatgagtctttcccggccaccgtg
gagtcgctgggcttcaaggagctcggacacaagtccaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatctgtgagaaccctcagttcattgttggaggagccagtaggaca
gacatctgccagggagatctgggtgactgctggttgctggctgccatcgcctgtctcacc
ttgaatgagaagcttctctaccgcgtcgttcctcaggagcagagcttctccgagggctat
ggaggcatcttccacttccagttctggcgttatggcgactgggtcgatgtcgtcattgac
gaccgcatcccaaccttcaacaaccagctggtcttcactaagtccgctgagaggaacgag
ttctggagcgccctgctggagaaggcctacgccaagctgcacggctcctacgaggccctg
aagggaggaaacaccaccgaggccatggaggatttcaccggtggagtcactgagttctac
gagatgaaggaagctcccaaagagctctacaagatcatgatgaaagctctggagagaggc
tccctcatgggctgctccatcgattccctggttccagctcgctttgagactcgtactgtg
acgggacttgtgaagggtcacgcctactctgtgacggcagtggaggagtgtaaatcgtct
cagcacaaggagtctaaagtccgtctggtgcgtctcaggaacccgtggggtcaagtggag
tggaacggtccctggagtgacaactctaaggagtgggccacactctccaagactgaaaag
gagaagctgcagcaccagagtgccgaggacggagagttctggatgtcattcgaggacttc
aagaagaactacactaagatcgagatctgtaacctcacccccgacgccctggaggacgac
aagatccacaagtggacggtttcagtgaacgagggtcgctgggtgagaggctgctctgct
gggggctgcaggaactacccagacactttctggaccaaccctcagtaccgcctccgtttg
ctggaggaggatgacgaccccgaggacaacgaggtgggctgcaccttcgtggtcgctctg
atgcagaagaacaggcggaaagagcgcaagatgggagccaacctcttcaccatcggattc
gccatttatgaggtgccaaaggagatgcacggtaacaagcagcacatgcagaaggacttc
ttcctgttcaactcctccaaagctcgctgcaagtcctacatcaacctgcgcgaggtgacc
cagcgtttccgcctgacccccggggagtacgtcatcgtgccctccacgtacgagccgcac
caggagggggagttcatcctgcgagtcttctctgaaaagaggaacacctcagaggagata
gagaacaggatcgaggccgatcatcccgtgccggcgccggcctctgcgggggaagagagc
gaggaggaccagcagttcaggactatttttcaggagatagccggcgatgacatggaaatc
acagccaacgagctgaaaaacgttctcaacagagtgatcaccaaacataaggacctgaac
acagagggcttcagcctggagagctgcaggagcatgattgctctgatggacatggacggg
accggtagactcaacctgcaggagttcagacatctgtggaataagatcaaacagtggcag
ggaatctttaatcactataacgccgaacagaccggcagcatcaacagctacgagatgagg
aatgctgtcaacgatgcaggcttccgtctcaacaaccagctgtacgacatcatcaccatg
cgctacgccaacgagggcatgaacatcgacttcgacagcttcatcagctgtctggttcgg
ctcgaagccatgttcagggcgttccaggccttcgatcaggatggagacggtacaatcaga
ctcagtgtcctggagtggctccagttgaccatgtacgcctag
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