Anoplopoma fimbria (sablefish): 129103078
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Entry
129103078 CDS
T09102
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129103078 (rtn1a)
03036 Chromosome and associated proteins [BR:
afb03036
]
129103078 (rtn1a)
Membrane trafficking [BR:
afb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
129103078 (rtn1a)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129103078 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
DUF4736
Motif
Other DBs
NCBI-GeneID:
129103078
NCBI-ProteinID:
XP_054469315
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All DBs
Position
15:complement(21202235..21222154)
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AA seq
727 aa
AA seq
DB search
MSAQPGEERGSEGRWFGDDCERNGLYGNTPTRFGELREDCQPGGGEVAGDLDQQLHPFQD
DGERPPVAMGTASTDDPMSGLFRKPMNDDGDVYTSLMSNQSFTSGREDSYLSDDLKPSKP
SSGSSALDQFSSDTYSFSSSTKMTSSLADDMPKSLFGSDKTESYNYMDISHGDEHHDQHS
LVDTGSTGHDSLGSYMDKNHGRDEEEEENLGSALGSHSFPYVEEPSDEELSDYRSYRNLG
GTPQTASPVKITLTESHPQTAKTELQPQAPPVSVSERENVLSVGLQGVPTVTLSEPEDDS
PASTPNASPTQKEFPSNDMFKADAVKPAASKSSPSTKPGSREHDGSSAESGDSEIELVSE
EPPKSTSNPFVQPNKSKGTFSQPNNPFDNPPVAKGGFGLAGNHAPPTAYSILREEREAEL
DSDLFIESASEESPKREQVLCGPKQAVRPPSPLVPSAVPPSSTAEVAPAQPGITEKIKTP
VKTEEDRPSKPKPPTAAVPPEVRSEKPHQDDMHKYTNEGKGDLGKPAASNFLQGFDKQKA
IDLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYKSVLQAVQ
KTDEGHPFKAYLEIEIALSQDQISKYADKILLYTNTCMKELRRLFLVQDLIDSLKFAVLM
WLLTYVGALFNGLTLLILAVVSMFSMPVVYEKHQAQIDQYVGLIRTQVNSVVGKIQAKIP
GAKRKEE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcagcccggagaggagcgaggctcggaggggaggtggtttggggatgactgt
gagaggaacggcctgtacgggaacacaccgacccgcttcggagagctccgggaggactgt
cagccgggaggcggagaggtcgccggagacctggatcaacaactccatcctttccaggac
gacggggaaaggcctcccgttgctatgggaactgcatccacagatgaccccatgtctggc
ctgtttaggaagcctatgaatgatgatggtgatgtctacacttccctgatgtcgaatcag
agcttcacatcgggtcgagaagactcctacctgtcggatgacctgaaaccgtctaagccc
tcctctggctcctctgccctggaccaattctcaagcgacacctacagcttcagctccagc
accaagatgacttccagcctggctgatgacatgcccaaatctctgtttggctcagataag
acagaatcctacaactacatggacatcagccacggggatgagcatcacgaccagcacagc
ctggtggacacaggctcaactggtcacgactcattgggcagctacatggataaaaaccac
ggaagagatgaggaggaagaggaaaaccttggttcagcactgggctcccactctttcccc
tacgtggaggagccatctgatgaagagctgtcagactaccgctcctaccgaaacctgggg
ggcaccccacagacggccagcccggtgaagatcactttgaccgagtcccatcctcaaact
gccaagactgagctgcagccacaagcccctccagtcagtgtgtctgagcgtgaaaacgtc
ctcagtgtgggcttgcagggggttcccactgtgacgctctcagagccagaggatgacagc
cctgcctccactcccaacgcttcaccaacacaaaaagaattcccttccaatgacatgttc
aaggctgacgcagtgaagcctgcagcttccaaaagcagtccaagcacaaagcccggcagc
agggagcatgatggcagcagcgcagagtctggagactcagagattgagctagtgtctgag
gagcctccaaagtccactagcaacccatttgtccaaccgaataaaagcaagggcactttc
agccagcctaacaacccctttgacaatcccccagtcgccaagggaggtttcggcctagca
ggcaaccacgctccacccacagcctacagcattctgagagaggagagagaggcagagctc
gacagtgatctcttcattgagtctgcgtctgaagagagcccaaagagagagcaggtctta
tgtggccccaaacaggcagtcaggcctccctctcccctggttcccagtgccgtcccccct
agcagtacggcggaggtggcgccagcccagcccgggatcacagaaaagatcaagacccca
gtgaaaacagaggaggatcgccccagcaagcccaagccacccactgctgccgtgccccca
gaggtgcgatcggagaagccccaccaggacgacatgcacaagtacaccaatgagggcaaa
ggagacctcggaaagcctgctgcctcaaacttcctgcagggctttgataaacaaaaagcg
attgacctgctctactggaggaatgtgaagcagtctggggctgtgttcagcagcgtgctt
ctgcttctcttctcgctgacccagttcagcgtggtcagtgtcggcgcctacctagccctg
gcagccctctctgccaccatcagctttaggatctacaagtctgtgctgcaggccgtgcag
aagacagatgagggacaccctttcaaagcctacttggagattgaaatcgctctatcccag
gaccagattagtaaatatgccgacaaaatcctgctgtacaccaacacctgtatgaaggag
ctccgcaggctgttcctcgtacaagacctgatcgactccttgaagtttgctgttttgatg
tggctgctgacctacgtgggcgccctcttcaacggcctgacactgctcatcctagctgtg
gtctccatgttcagcatgcctgtggtctacgagaagcatcaggcccagattgatcagtat
gtgggactaatacggacccaagtcaactctgtggtggggaagatccaagcgaagatccct
ggagccaagaggaaggaggagtag
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