Anoplopoma fimbria (sablefish): 129103134
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Entry
129103134 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129103134
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
129103134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
EGF_2
EGF_Teneurin
EGF_TEN
CUSTOS
Motif
Other DBs
NCBI-GeneID:
129103134
NCBI-ProteinID:
XP_054469408
LinkDB
All DBs
Position
15:complement(19702333..19780202)
Genome browser
AA seq
2080 aa
AA seq
DB search
MDRAGFAVLVLLTVALLRIGDGHKDTTGERKEGAGPGRAVWNQQRSQVRSQGHSPRGRED
GASSGPSGGTRTLVRVPRATSSQVDGRHISKAGPGHAAGASREDVLSPPRSARQTSGQQH
GTRVNRRPSSKPTSAGIRRLVGPNVCGGQQCCSGWALAPGTNRCIKPDCQPRCQNRGSCS
RPQTCVCRSGFQGPRCEEVAPEQVYIRDGGALRRVQPGTNPFQKDQPRRRPSERQAIDTT
KVQPPRPATTRQPVTQVRRGPPDSSPQQTGTSRTVKRYPSSSGPITSNALPNGNSYANGH
GSEHRNWHGHRNGHRNSHSNTHRPGSDSQLNGQFNNALLPAGANLTSSLDRIKIVFTPML
CRRVCSGGRCYNSCEKGDITTVYSENSQQQQQQQQQQPPKNQGFRLFFCQIPCLNGGRCI
GRDLCWCPSNSTGKFCHLPSPPPARPTPHSHKDASHQGPKSPLHTMYTLPLSNQQVSLHP
SLVNVHIQHPPDADVQIHQVARVQPGQRPATADGAHSVQQRSQPGNGHETINDHSSRQPH
TSGNGNNHARTHNHQNGHVGRCFQETVDGQCGKPLPGLTKQDDCCGSVGASWGLNKCQKC
PTKPAYAVIANGQVECPKGFKRMNLTHCQDINECLLPGLCKNAECLNNRGSYRCTCKPGF
LLDADRSHCVSDKAVSDQRAFCYRSVSVGTCSLQLPQHITKQICCCSRVGKAWGPGCDRC
PLPGSDHFKEICPAGHGYTYSRSDVQISVTQLGEEELQSTGVSWEEQSPNFPQPPSSQPW
LPQPSRPQYPSYPQTPQVPQYPXYPETPQAPRYPLTPQQPLHPSHPARETPMQPEDVEIL
SPPAVVTDSPLTYPEASPDSAIINLRPDSEDTTHTDSAKGIDKCAIAPAICGPGRCIPVQ
TGYTCNCEPGFKLSALQTNCIDVNECDEDPCEGKGHCLNSYGSYTCQCHSGYSQVITQNR
KFCQDINECSMPNKCQNGKCVNTDGSYTCECSSGYAKSWRGQCEDVDECRDPSSCPNGVC
VNTLGSFQCQACGPGLRPVDERCVDVNECLNQTVCGGGRCVNTEGSYRCNCFQGYKVSPD
NVCQDVDECGLPGVCLHGSCVNLDGTHRCICNHGYQVTSDSKTCEDVNECKTGNVCPAGI
CINTAGSYTCQNCRPGFGPSADGMRCDDINECAQGDLCLGGVCANTEGSYTCTRCKAGYR
VSEDRQRCEDVDECQSLSTCSNGICLNSEGSYTCENCPTGYRVSYDGELCEDIDECALPT
TCPQGTCTNTEGSFTCVVCQPGFRVSEDGQQCDDVDECLVANICLGQLCLNTPGSFTCRS
CGAGLQLSGDGYSCEDIDECQMPGRCPTGICTNTEGSFSCMACDPGFTVAPNGLSCEDVN
ECEDPSLCVGGQCTNSIGSYNCLCPAGLELVDGTSCRDVNECLTIMGICGEGDCLNTQGS
YTCICPDGYTNIDGRTGCQDVDECSKDNVCIRGECLNIDGSFMCLCEAGFKFNADTADCE
DQNECKDFGSSVCGTWRCENTIGSYRCFMGCQPGLEGEDATDCDIDECLNETICGNHGFC
ENTDGSFRCQCDQGYTNPPGDMSKCVDVNECEMSLALCGEALCENFDGSFLCICPNDNEE
FDPITSRCRSLAALVPIPDARLPLSAPSTEERKECYYNLNDANFCDNVLSHNTTKQECCC
TVGAGWGDNCEIHACPDPGRDDYNQLCPHGSGLLPLPVPSTQNLGEQHPYIDANECEMFG
SDICKNGQCSNLFSTYTCYCRSGFYYDNIRLECVDYDECGFGNACEDGACVNTAGSFNCF
CSPPLVLDNTRQRCIGLNATEETLEPDHDVHMDICWQRLEGDNVCSQPLQGRRSTYTECC
CLWGVAWSGQCAFCPTKDSEDYAVMCNLPRGGGTDSLRERPGYEYGLEGPEDPVEPFVPP
YWDSYGGPAGPYDIPEGIPLFNDNDYGVQQPPSRVPIQRPREPQPRPVDSYAARYHSFEG
LRAEECGILNGCENGRCVRVREGYTCDCFDGYELDLNKMACIDINECEDISDKVPLCQNG
QCTNTEGSYKCTCLPGFVASVEPHKCIPEIPESGLLETGN
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtgcaggattcgctgttttggtgcttttgactgttgcactgctgcgaattggt
gacggtcacaaggacacaacaggtgagaggaaagagggtgcagggccaggcagggcggtt
tggaaccagcagcggtcccaggtgaggagtcaaggtcactcgccaaggggacgagaggac
ggcgcatcctccggaccgtccgggggaactaggactctagtccgcgtaccgagggccacg
tcatcccaggtggacggcaggcacatatccaaagcaggaccaggtcatgctgcaggcgcc
tcccgggaggatgtgctctctccgccgcggagcgccagacagacgagcggtcagcagcac
ggaacccgagtgaaccgcaggccgagcagcaagcccacctctgccggcataaggaggctt
gttggacctaatgtctgtgggggtcagcagtgctgctcaggctgggctttggcaccagga
accaatcgctgcattaaacctgactgccagccccgctgccagaaccgtggctcctgcagc
cggccacagacctgtgtgtgtcgctcaggcttccaggggccccgctgtgaggaggtggct
ccagagcaggtgtacatccgcgatggaggcgccctgaggcgcgttcaaccggggaccaac
cctttccagaaagaccaaccacggagaaggccctcggaaaggcaggccatcgataccacc
aaggtccagcccccacgacctgcaaccaccagacagcctgtgacccaagtgagacgggga
ccccctgactcctcacctcagcagactgggacctcccgcacggtgaaacgttatccatca
tcctctggacccataacgtccaacgctctaccaaatggcaacagctacgctaacggccac
ggcagtgaacacaggaactggcatggacacagaaatgggcatcgcaacagtcactccaac
actcacaggcccggcagtgacagccagctgaacgggcagttcaacaatgcattattacca
gcaggggccaacctcacctccagcttggaccgcatcaagatcgtcttcacccccatgctg
tgccgccgggtgtgtagcggtggccgctgctacaacagctgtgagaagggggacatcacc
acggtctacagcgagaactcccagcagcagcaacagcagcagcagcagcagccgccaaag
aaccagggcttccgactcttcttctgtcagataccctgtcttaatggaggccgctgcatt
ggcagggacctgtgctggtgtccatcaaattcaactggcaagttttgtcacctgccgtcc
ccgcctcctgccagacccacccctcacagccacaaggatgccagccaccagggaccgaaa
tctcccctccacaccatgtacactctaccactgtccaatcaacaagtgtctctccaccca
tccttggtgaacgtccacattcaacaccctccagatgccgatgtccagatccaccaagta
gctcgggttcagccaggacagagaccggccactgcagatggggctcactctgtccagcag
cgctcccagcctgggaatggacatgaaaccatcaatgaccatagcagcaggcaaccacac
accagtgggaacgggaataaccatgccagaacgcacaaccatcagaacggacatgttggg
agatgctttcaagagacagttgatggacagtgtggcaagcctctgccaggcctaaccaaa
caggatgattgctgtggaagcgtgggcgcctcctggggtctaaacaagtgccaaaagtgt
ccaaccaaaccagcatatgcagtgatcgcaaacggacaagtggaatgtcccaaaggtttt
aaacgaatgaatctcacacactgtcaagatatcaacgagtgcctgttgcccgggctctgt
aagaacgctgaatgtctcaacaacagaggaagctacaggtgcacgtgtaaaccaggcttc
ttgttggatgctgacaggagccattgtgtctcggacaaggctgtgtctgaccagagggca
ttctgctaccggtcggtatcagtgggcacatgctccctgcagctacctcaacacatcacc
aagcagatctgctgctgtagccgcgtgggcaaggcctggggccccgggtgtgatcgctgt
cctttgccgggatcagaccatttcaaggagatctgcccagctggtcatggatacacctac
tcgcgctctgatgtgcagatttctgtgacacagctgggggaagaggaactgcagagcaca
ggagtgtcatgggaggagcaaagccccaatttccctcaacctccatcctcccagccctgg
ctgccccaacctagcaggccacaatatcccagctacccacagacgccacaagtaccccaa
tacccgnagtaccctgagacaccacaagcaccccggtaccctctgactccacagcagcct
ctccatccttctcacccagccagagagacacctatgcagccagaggatgtggaaattctg
agcccgccagctgttgtgaccgactcaccactgacatatccagaggcttctccagactcc
gccatcatcaacctgaggccagattcagaggacacaacccacacagactcagctaaaggt
attgacaagtgtgccatcgcccccgccatatgtggccctggtagatgtattcctgtgcag
accggctatacctgcaactgcgagccggggttcaagctcagcgcactgcagaccaactgc
attgatgtgaatgaatgtgacgaggacccatgtgaagggaagggccactgtttaaacagc
tatggctcctatacctgtcaatgccacagcggctacagccaggtgatcacccagaacagg
aagttctgtcaagacattaatgagtgcagcatgcccaacaagtgccagaatggcaaatgc
gtcaacacagacggatcttacacctgtgaatgcagcagtggctacgccaagtcttggagg
ggccaatgcgaagatgtagatgagtgcagagatcccagctcctgtcccaacggtgtctgc
gtcaacactcttggctccttccagtgccaggcctgcggcccggggttaaggcctgttgat
gaaagatgtgtggatgttaacgagtgcttgaaccaaacagtgtgcggtggtggtaggtgt
gtcaacacagagggctcctatagatgcaactgtttccaaggatacaaagtctcaccggac
aacgtttgccaagatgtggatgagtgtgggctccctggagtttgtctccacggcagctgt
gtcaatttggacggcacccacagatgcatctgtaaccatggttaccaagtcacctcagac
agcaaaacctgtgaagatgtcaacgagtgcaaaactggtaacgtttgccctgcgggaatt
tgcatcaacactgcaggttcttacacttgccagaactgcaggcctgggtttggtccgtca
gctgatggaatgagatgtgatgatataaatgagtgtgcccagggggatctgtgtcttggt
ggagtgtgtgccaacacggagggatcctacacctgtaccagatgtaaggctggctacagg
gtgtctgaagaccggcagaggtgtgaagatgttgacgagtgccagtccctgtctacctgt
tccaacgggatctgtctaaactcagaaggctcttacacctgtgagaactgcccgacaggg
tacagagtatcatatgacggggagctctgtgaagatattgatgagtgtgcgctgcccact
acatgcccccagggaacatgtacaaacacagagggttccttcacatgtgtcgtctgtcaa
cccgggtttagagtctctgaggatggacaacagtgtgatgatgtggatgagtgtttggtg
gctaatatttgcctgggccagctttgcttgaacaccccaggatccttcacctgcaggagc
tgtggagccggtctgcaactgtctggggacggttacagctgtgaggacattgacgagtgc
cagatgccaggtaggtgccccactggcatttgcaccaacacagagggctccttctcctgc
atggcctgtgacccaggcttcacagtggctcccaacgggctctcatgtgaagatgtaaat
gaatgtgaggaccccagcttgtgtgtgggaggccagtgcaccaactccatcggttcttat
aactgcctctgccccgccggtctggagctggtggatgggacgtcctgcagagatgtcaat
gagtgtttaaccatcatggggatctgcggagaaggtgactgtctgaacactcagggctcc
tatacatgcatctgtcctgatggatataccaacatcgatggaaggaccggctgccaagat
gtggatgaatgcagtaaagacaatgtgtgcatccggggcgagtgtctgaacattgatggc
tctttcatgtgcttgtgtgaggctggcttcaagttcaacgctgacacggctgattgtgaa
gaccagaatgagtgcaaggactttggtagctcagtgtgtggtacctggcgctgcgaaaac
accatcggctcctaccggtgcttcatgggctgccaacccggcctcgagggggaagacgcc
acagactgtgatattgatgagtgtctcaatgaaaccatctgtgggaaccacggcttctgc
gagaacacagacggctccttccgctgccagtgtgaccaaggctacaccaacccgccagga
gacatgagcaaatgtgtcgacgtgaacgagtgcgagatgagcttggcgctgtgcggtgag
gccctgtgtgagaacttcgatggcagcttcctgtgcatctgccccaacgacaatgaggaa
tttgatcccatcaccagccggtgccgctccctggctgctttggtcccgatacccgatgct
cgactccctctgtccgctccctcaactgaggagaggaaagagtgctactacaacttgaat
gacgccaacttctgtgacaacgtcttgtctcacaacaccaccaagcaggagtgctgctgc
acggtgggggccggctggggggacaactgcgagatccacgcctgtcctgacccaggaaga
gatgactataaccagttgtgccctcatggcagtggattgttacccctgcctgttccctct
acacaaaatctgggagaacagcacccttacatagatgcaaacgagtgtgagatgtttgga
tcagacatctgtaagaatggacagtgttcgaatctcttttctacctacacctgctactgt
cgctctggcttctactatgacaacatccggcttgagtgtgtggattacgatgagtgtggg
tttggaaacgcctgtgaagatggagcgtgtgttaacacggccgggtctttcaactgtttc
tgcagtcctcctttagtcctggacaacacacgccagcgctgcattggcctcaacgccaca
gaagaaactctagagccggatcacgatgtgcacatggatatttgctggcagcgtcttgag
ggggacaacgtgtgttcacaacccctgcagggacgcagaagtacatacaccgaatgctgc
tgcctgtggggcgtcgcctggagtggacagtgtgccttctgtcccacgaaagactctgag
gactacgcagtgatgtgcaaccttcctcggggaggaggaacagacagtctgcgagagagg
ccaggatacgagtacggtcttgaggggccagaggatcctgtggagcctttcgttcctccg
tactgggacagctatggcggccctgcaggaccctatgacattcctgagggcattcctctc
tttaatgacaacgactacggcgttcaacagccaccttcccgtgtccccattcaaagacca
cgcgagccgcagccacgaccagtggattcctatgctgcgcgttaccacagctttgagggt
ctccgagcagaggaatgtggaatcctgaacgggtgcgaaaacggtcgctgcgtccgtgtg
cgagaaggctacacctgtgactgcttcgacggctacgaactcgacctgaacaagatggcc
tgtatagacattaacgagtgtgaggacatcagcgacaaggtgcccctgtgtcagaacggg
cagtgcaccaacacggaggggtcgtataagtgcacctgtctgccgggcttcgtggcctcc
gtagagccacacaaatgcatcccagagatcccagagtctgggcttttggagacgggaaac
tga
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