Anoplopoma fimbria (sablefish): 129103163 Help Entry 129103163         CDS       T09102                                  Symbol actn1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb04510   Focal adhesion afb04517   IgSF CAM signaling afb04518   Integrin signaling afb04519   Cadherin signaling afb04520   Adherens junction afb04530   Tight junction afb04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:afb00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     129103163 (actn1)    04518 Integrin signaling     129103163 (actn1)    04519 Cadherin signaling     129103163 (actn1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     129103163 (actn1)    04520 Adherens junction     129103163 (actn1)    04530 Tight junction     129103163 (actn1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     129103163 (actn1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:afb04131]     129103163 (actn1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:afb04812]     129103163 (actn1)    04147 Exosome [BR:afb04147]     129103163 (actn1) Membrane trafficking [BR:afb04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     129103163 (actn1) Cytoskeleton proteins [BR:afb04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      129103163 (actn1) Exosome [BR:afb04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    129103163 (actn1)   Exosomal proteins of colorectal cancer cells    129103163 (actn1)   Exosomal proteins of bladder cancer cells    129103163 (actn1) SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 XisI Motif Other DBs NCBI-GeneID:  129103163 NCBI-ProteinID:  XP_054469450 LinkDB All DBs Position 15:complement(5730668..5788883) Genome browser AA seq 895 aa AA seqDB search MYMYNMEQYDEEIVYMNQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIDNIEE DFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVD GNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGL GFCALIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKA IMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWL ENRLPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSE GKMVSDINNGWGNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKEEML QKRDYETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPNVNGRCQ RICDQWDALGAMTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFI VHTIEEIQGLSTAHEQFKATLPEADKERQAILGIHNEIAKIVQTYHVNMAGTNPYTTINP QDINAKWEKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRIS IEMHGTLEDQLTHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGW EQLLTTIARTINEIENQILTRDAKGISQEQLNEYRASFNHFDRDHSGTLGAEEFKACLIS LGFDIANDAQGENEFSRIMSIVDPNRMGTVTFQAFIDFMSRETADTDTADQVVASFKVLA GDKNYILADELLRELPPDQAEYCMARMAPYTGPDGVPGALDYMSFSTALYGESDL NT seq 2688 nt NT seq  +upstreamnt  +downstreamnt atgtacatgtataatatggaacagtatgatgaagagattgtttatatgaaccaggaagat gactgggaccgggatctcctcctggatcctgcatgggagaagcagcagagaaagacattt acagcttggtgtaactctcacctgaggaaagcaggaacacagatcgacaacatcgaggag gacttccgtgatggactgaaactcatgctgctgctggaggtcatctccggcgaacgcttg gccaaaccagagagaggcaagatgagagtccacaagatctccaacgttaacaaagcactt gacttcatcgccagcaaaggagtgaagctggtgtcgatcggagccgaggagatcgtagac ggcaacgctaagatgaccctgggaatgatctggaccataatcctccgcttcgccattcaa gacatttcagtggaagagacatctgccaaagagggcctcctgttgtggtgccagaggaag accgcgccctacaagaatgtcaacatccaaaactttcacatcagctggaaagatggtttg ggtttctgtgcactcattcatcgacaccgtccggagctcatcgactatggaaaactgcgc aaggacgaccccatgaccaacctgaacacagccttcgacgtggcagagaagtacctggac atccccaagatgttggacgcagaagacatcgtgggcactgcccgtccggacgagaaggcc atcatgacctacgtctctagcttctaccacgccttctcaggcgcccagaaggcagagaca gccgccaacaggatctgcaaggtgctggctgtcaaccaagagaatgagcagctgatggag gactatgagaagctggccagtgatctgttggagtggatccgtcgcaccatcccctggctg gagaaccgcttgcccgagaacaccatgcaggccatgcagcagaagctggaggacttcaga gattaccgccgcctccacaagccgcccaaagtgcaggagaagtgccagctggagatcaac ttcaacaccctgcagaccaagctgaggctcagcaacaggcccgccttcatgccctcggag gggaagatggtctcggacattaacaatgggtggggaaatctagagggagcagagaaaggc tacgaagagtggctcctcaatgagatccgcaggctggaaagactcgaccacctggcggag aaattccgccagaaagcagccatccatgaagcttggactgaaggtaaggaggaaatgctg cagaagcgtgactacgagacggcctctctgtcggagatcaaggccctgctgaagaaacac gaggccttcgagagcgatctggctgcacatcaggaccgagtggagcagatcgctgccatc gctcaggagttaaatgagctggactactacgactcccccaatgtaaacggtcgctgccag cggatttgcgaccagtgggacgccctgggagctatgacccagaaacgcagcgaggctttg cagagaacggagaagctgcttgaaaccattgaccaactgtaccttgagtttgccaaaaga gcggctccgttcaacaactggatggagggcgccatggaggacctgcaggataccttcatc gtccacaccatcgaggaaatccaggggttaagcacagcccacgagcagttcaaagccacg ctgccagaggccgacaaagagcgccaggccatcctgggcatccacaacgagatcgccaag attgtgcaaacctatcacgtgaatatggccggcaccaacccctacaccaccatcaaccca caggatattaacgccaaatgggagaaggtccggcagctggtgcctcagcgcgaccaggct ctgatcgaggaacacgcccggcagcagaacaacgagcgtctgcgccgacagtttgccaac caggccaacgtcatcgggccctggatccagaccaagatggaggaaattggccgcatctca atcgagatgcacggcaccctggaggaccagctgacccacctacgccagtacgagaagagc atcgtcaactacaagccaaagatcgaccagctggagggagaccaccagctcattcaggaa gccctcatctttgacaacaagcacaccaactacaccatggagcacatccgcgtgggctgg gagcagctactcaccaccatcgcccgcaccatcaacgaaatcgagaaccagatcttgacg cgagacgccaagggcatcagccaggaacagctgaacgagtaccgggcttccttcaaccac ttcgacagggaccactcgggcactctgggcgcggaggagttcaaggcctgcctgatcagc ctgggcttcgatatcgccaacgatgcacagggtgagaacgagttctcccgcatcatgagc atagtggatcccaaccggatgggcaccgtcaccttccaggccttcatcgacttcatgtcc cgcgagacggccgacacggacactgccgaccaagtcgtggcctccttcaaagtcctagca ggggacaagaactacattttagccgacgagctgctccgggagctgcctccggaccaggcg gagtactgcatggcccgcatggccccctacaccggccccgacggcgtgcccggagccctc gactacatgtcgttctctaccgctctgtacggagagagcgacctctga

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