Anoplopoma fimbria (sablefish): 129103239
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Entry
129103239 CDS
T09102
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129103239 (scfd1)
Membrane trafficking [BR:
afb04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
129103239 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
129103239 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Peptidase_S66
PS_pyruv_trans
Motif
Other DBs
NCBI-GeneID:
129103239
NCBI-ProteinID:
XP_054469571
LinkDB
All DBs
Position
15:complement(1932618..1956725)
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AA seq
632 aa
AA seq
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MAASVREKQTVALRRMLNFNAPPLKNTASEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDREPIPDVPAIYFIMPTEENIDRICQDLRNQLYESYFLNFISAISRSKLEDI
ASAALAANAVAQVTKVYDQYLNFITLEDDMFTLCHQNKELISYHAINRADIQDTDMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMAAGQ
FSFQRPLFVLADRNMDMATPLHHTWTYQALIHDVLDYQLNRVVMEEGAGAEPSPAGARPK
KKNRKAYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTPEDKMRLFLIYYITAQQAPSESDLEQYKTALLDAGCDLSPL
NYIKQWKAFTKMAATPANYGNSGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
AKVKQGKKVVYGCSELSNAAQFTKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccgtccgggagaagcagacagtggctctgaggcggatgctgaacttcaac
gctcctcctctgaagaacacagcatctgagccagtatggaaggtgttgatatacgacagg
tttggccaagacatcatctcccctctgctgtccgtcaaagagctgagagacatgggcatc
accctgcaccttctgcttcactcggaccgagagcccatcccggatgttccagccatctac
ttcatcatgccaacagaggagaacatcgacaggatatgccaggacctgaggaaccagctg
tacgagtcctacttcctcaacttcatctccgccatcagcagaagtaaactggaggacatc
gccagcgctgctctggctgctaacgctgtcgcccaagtcaccaaggtgtatgatcagtac
ctgaacttcatcactctggaagatgacatgttcaccctctgccatcaaaacaaggagctc
atctcctaccatgccatcaacagagcagacatccaggacacagacatggaggccatcatg
gacaccatcgtggacagtctcttctgtttcttcgtcactctgggtgcggtgccgatcatt
cgctgtccccgtggaaacgcagcagagatggtcgccgtgaagttggataagaagctccgt
gagaacctgcgggacgccagaaacagtcttttcaccggagacaacatggccgccggacag
ttcagtttccagaggcctctgttcgtcctggcagatcgtaacatggacatggccacgccc
ctccaccacacctggacctatcaggcgctgatccacgacgtcctggactaccagctcaac
agggtggtgatggaggagggggcgggggccgagccatcacccgccggcgccagaccaaag
aagaagaacagaaaggcctacgacctgactgctgccgacaagttctggcagaaacacaag
ggcagtccgttcccagaggtggcggagtcggtccaggaggagctggacacctacagagcc
caggaggacgaggtcaaacgcctgaagagcatcatgggtttggagggagaagatgaagga
gccatcagcatgctgtcagacaacacagccaagctcacctctgctgtcagctctctgcct
gagctgctggagaagaagaggctgatcgacctgcacaccaacgtggccacggccgtcctc
gaccacatcaagagtcgtaaactggacgtttactttgagtatgaagagaaactgatgagc
aagtcgactctggacaaatcactgctggacatcatcagtgaccccgacgctggaaccccc
gaagacaaaatgagactcttcctcatctactacatcactgctcagcaggctccttcagag
tcggacttggagcagtacaagacggctctgttggacgcaggctgcgacctttcacctctc
aactacatcaaacagtggaaggcgtttaccaagatggccgccaccccggctaactacggc
aacagtggagtcaaacccatggggctcttttccagagtgatgaacaccggctcccagttt
gtgatggagggagtgaagaacctggtgctcaaacaacataaccttccagtcactcggatc
ctggacaacctgatggagatgaagtcgaaccctgaaacagacgactatcggtactttgac
ccaaagatgctgcgaggcagcgagagctccattcccaggaacaagaacccgtttcaggag
gccatcgtgttcgtggtaggaggaggaaactacatcgagtaccagaacctggtggactac
gccaaggtcaaacaggggaagaaggtcgtttacggctgcagtgaactctccaacgctgct
cagttcaccaaacagctctcccagctcggccaaaagtga
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