Anoplopoma fimbria (sablefish): 129103316
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Entry
129103316 CDS
T09102
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
afb04140
Autophagy - animal
afb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129103316 (hif1aa)
04137 Mitophagy - animal
129103316 (hif1aa)
04148 Efferocytosis
129103316 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129103316 (hif1aa)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129103316 (hif1aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
HIF-1a_CTAD
PAS_11
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
129103316
NCBI-ProteinID:
XP_054469698
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Position
15:21413191..21427344
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AA seq
755 aa
AA seq
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MDTGVVPEKKRVSSERRKEKSRDAARSRRGKESEVFYELAQELPLPHSVSSSLDKASIMR
LIISYLRMRKLLSTDESMTEEETELESQLKSSYLKTLDGFLLVLSEDGDMIYLSENVNKC
LGLAQFDLTGQSVFDYIHPCDLEELREMLIHKTGSKKTKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRIYDIHTEEETPNGHKEPPVPYLVLICDPIQHPSNIEVPLDT
KTFLSRHTMDMKFTYCDERITELMGYDPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQ
VSTGQYRMLAKRGGFVWVETQATVIYSNKNSQPQCVVCVNFVLSGIQEEKLILSLEQIED
VKPLKEEKQEEEKVVVESSQPDVSQTVIDEKKSPELDVIKLFTQAVEAKPPASLYDQLKA
QPEALTLLAPAAGDAIISLDFSCPDSEIQLLKEVPLYNDVMLPSTSDKLALPLSPLPLSE
PLRVTTTSSEDAKAKSYDPAGSTSPTSHSSSEADSPLDFCFPMDSEMSSDFKLDLVEKLF
AIDTEPKAPFTKQAMEDLDLEMLAPYIPMDDDFQLRSLTPEESLTCGPVKSPQSSPIHVT
QDSHSYPSSPFSAPVSRTASPAPLTTPHLATIIAKSTPQLDKEVSLRTLAAQNSQRKRKL
GDIKDLIGQETLPQEQVKQGKKLKASESGTTRTIFLLPSDLASRLLGSTSECTGSLFGLP
QLTRYDCEVNAPLQGRQYLLQGEELLRALDHINTI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggagtcgtaccagaaaagaaaagggtgagctcggagcggaggaaggagaag
tcgagggatgctgcgcgatcccggcgtgggaaggagtctgaggtgttctacgagctggca
caggagctgcccctgccccacagcgtcagctccagcctggacaaggcctcgataatgagg
ctcatcatcagctacctgcgcatgagaaaactgctcagcactgatgagtcaatgacagag
gaggaaacagagcttgaatcacagctaaaaagctcctacctaaagactttggatggcttt
cttttggtcctgtcggaagatggagatatgatctatctctccgagaatgtcaacaaatgc
ctcgggctggcacagtttgacctgactggacaaagtgtgtttgactacatacatccttgt
gacctggaagagctgagggagatgctgatccacaaaacaggatccaaaaagaccaaggaa
ccaaacacagagcgcagcttcttcctccgaatgaaatgcactctcaccagcaggggccgc
acggtcaatgtcaaatcagctacatggaaggtgctccactgctcaggtcatgtccgtata
tacgacatccacaccgaggaggagactcccaacgggcacaaggagccacctgtgccctac
ctggttttgatctgtgacccaatccaacatccttccaacattgaggtccctcttgacacc
aagacttttctcagccgccatacgatggacatgaagttcacgtattgtgacgaaaggatt
actgagctcatgggttatgatccagatgacctgttgaatcgttctgtgtacgagtactat
catgctctggactcagaccatcttaccaagactcaccacaacttgtttgcaaagggccaa
gtgagcacaggccagtaccggatgttggccaagagaggaggctttgtgtgggtggaaaca
caagccactgtcatctacagcaacaagaactcccagccacagtgtgttgtctgtgtcaac
tttgtgctcagtggcatccaggaggagaaactgatattgtccctggagcagatcgaggat
gtgaagccactgaaggaggagaagcaggaggaagaaaaggttgtggttgagagcagccag
cccgacgtgtctcagaccgtaattgatgagaagaagagcccagagctggatgtgatcaaa
ctgttcactcaggcagtagaggccaagcctccggctagcctgtatgaccagctgaaggca
cagcccgaggccctcacactgcttgccccagcggctggagacgcaatcatctccctggac
ttcagctgccctgattcagagatccagctgctgaaggaggtccctctatacaatgatgta
atgcttccctccaccagcgacaagctggctctgcctctttcccctctgccgctcagcgag
cctctccgtgtcaccaccaccagctctgaggatgccaaagctaagagctatgatccagcc
gggtccacctcaccgaccagccacagctcctcagaggctgacagtccgctggacttttgt
tttcccatggactcagagatgagctcagattttaaactagacttggtggagaagctgttt
gccattgatacagagcccaaggcccccttcaccaaacaggcaatggaagacttagatctg
gaaatgttagctccctacatccccatggatgatgacttccagctgcgcagtctgacccca
gaagaatctctaacttgtggaccagtcaaatcccctcagagttctccaatccatgtgaca
caggacagtcacagctatcccagctccccattcagtgcaccagttagtcgcacagcttcc
ccagcaccacttaccacccctcatcttgccaccatcattgctaagagtactccacagctg
gacaaagaagtctcgctcaggaccctggcagctcagaattcacagcgcaaaagaaagctt
ggtgacataaaagaccttattggacaggaaactttgccccaggaacaagtgaagcagggc
aaaaagctgaaggcctcagagtcaggaaccaccaggaccatatttctgctgccttcagat
ctggcgagtcgtctgctgggaagcacttcagagtgcaccggttcccttttcggcctgcca
cagctcacccgctacgactgcgaggtcaatgcccccctgcagggtcgtcagtacctgctg
cagggggaggagctgctccgcgctctggaccacatcaatacaatctaa
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