Anoplopoma fimbria (sablefish): 129103341
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Entry
129103341 CDS
T09102
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129103341 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129103341 (mlh3)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
129103341 (mlh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
WW
MIT_C
Motif
Other DBs
NCBI-GeneID:
129103341
NCBI-ProteinID:
XP_054469742
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Position
15:complement(20159913..20168049)
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AA seq
1197 aa
AA seq
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MIKCLPGDVQGKLRSGVALPSMQQCVEELTLNSIDAEATCVGVRVDMEAFRVQVVDNGAG
INEEDVEQVGNRYHTSKCSSVEDLDNLRWFGFRGEALASVVSLSKLVEISTRTRSSVKTH
VKIFKDGKGMDVFEAETARPSSGTTVVVCDFLHNMPVRRKRMDAVLEGERIRHRVEAVSL
MHPAVSFTLKNDCTGAMMVQLPKARNTYHRFVQIHGLGRAQTLGEISYRRGQFEVLGYIG
REGHYNNSLQFLYVNDRLLLKTRIHKLLNFLLRRLNSPDRESAIRSPKHKRSQELHGVYV
INIKCPYSEYDVCLEPAKTLIEFKDWDGLLLCIEEAAKAFLTKENLVAVLSHDDLDDPKL
FGTDTDKEGHNTGYGGQATSRASSLDCTFGMKLASDPVHRKRKDECVYEDNVSQQCGQTE
CNDKTEEEQKITANELEKINSEESINKEFRSEPLCDQARLEPTSDNSITEEEEPTFCEDG
EGTQVLCLSNSVRQIESEKLEPPTEKEIPLNTTTSTSSVIPLDRIYQQIQPDLNSIEQIL
PDCPGAGGPEFTLIRNKRISLSDPYIHENPQTQDLSQINKSVFQQQVIVQKCEERSFASK
RKISLCAGHDRTSQKPSDNIIPSKIHRISTCQKLSLCKESGSLEKFRRVYGQADELKLHS
LENNTRLPQTDGFVLNSQNVSVCQKDQQDGGVKETEKEEKCSSLQSPLNLSAFAKLKPVP
VPKTGKISLAAKLFHFKQHRTENSNVLPHQDNTCLSSGNDGSQDGNNNENHCDTALNPEP
VQGCRENPVLVESQEDTTSGDWLHHYDTSVGKIVYVNKVTGLSRYEDPAAEETHACCTSD
VTNMAVGVISEMGMEYRCYPFQVDLVLPFLPKSRTERVISLGLDDRDESVERSNSLKSLY
SKWNNPVFVCPPTVGVDISSGQADGLAVKIHNILFPYRFSKAMIHSMKVIHQVDKKFLAC
LINTKDEESAALTETEGNLLVLVDQHAAHERVRLENLIADSYEDDPDAPGERRLCSSTIL
PPLEISVTEEEQRLLRSCEAHLRSLGLEVKFSQAANPQALIGKVPLCFMEKESNELRRGR
QSVIKPIVKEYLQEQIELLRSTGRVRGTLPLTVLKVLASLACHGAIKFNDSLSRDECCSL
VASLSSCQLPFQCAHGRPSIAPLVDTLHLDKDEKVLQKPNLQKLRRMYKAWELYGNR
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtctgcctggagacgtgcaggggaagctccgctccggggtcgccctcccc
tccatgcagcagtgtgtagaggagctcacactgaacagcatcgatgctgaggccacctgt
gtgggggtgagggtggacatggaggccttcagggtccaggtggtggacaacggggctggg
atcaatgaagaggatgtggagcaagtgggaaacagataccacacaagcaaatgcagctct
gtggaagacctggacaacctcaggtggtttggcttcagaggagaagccctggccagtgtc
gtctctctctccaaactggtggagatctcaaccaggaccagatcatcagtgaaaacccac
gtgaagatcttcaaggacggcaagggcatggatgtgtttgaagcagagaccgctcggccc
tcctcggggacgactgttgtggtttgtgacttcctccacaacatgccagtccggaggaag
aggatggatgccgtcctggagggtgagaggatcagacacagggtggaggccgtctccctg
atgcatcccgctgtgtctttcaccctgaagaacgactgcacaggagccatgatggtgcag
cttcctaaagccagaaacacctaccaccggttcgttcagatacacggcctcgggcgagca
cagactcttggagaaatcagctacagacgtggacagtttgaagtgctcggttacattggc
agagaaggccactacaataacagcttacagttcttgtatgtgaatgacagactgctcctg
aaaacaaggatacacaagctcctgaactttctccttcgcagactgaacagtccagacagg
gagtccgccatcaggagtccaaagcacaaacgaagccaagaactgcatggagtatacgtc
atcaatatcaagtgcccttactcagagtatgacgtatgtcttgagcctgccaaaactctg
atagagttcaaagattgggatggacttttgctgtgtatagaggaggcagcgaaagctttc
ctgaccaaagagaacttggtggctgtgctttctcacgatgacttggacgatcccaaattg
tttggcactgacactgacaaagaggggcataacacgggctacggcggccaagcaactagc
agagcttcctcgctagattgcacttttggaatgaaactggcatctgatcctgttcatcga
aaacgcaaagatgaatgtgtatatgaggacaatgtaagtcagcagtgtggtcagacagaa
tgcaatgacaagactgaagaagagcaaaagataactgcaaatgaattggaaaagataaat
agtgaagaaagcataaacaaagaatttagatctgaaccactgtgtgatcaggctagactt
gaacctacatctgataatagcattactgaggaagaggagcctactttttgtgaagatggg
gaaggcactcaggtgttgtgtttgtcaaattcagtcagacaaatagaaagtgaaaaactg
gaacccccaacagaaaaagagatcccattaaacactactacctccaccagcagtgtgatt
ccactagaccgcatctatcaacaaattcaacctgatttaaacagtattgagcaaatatta
cctgactgcccgggtgcaggaggaccagaatttactttaataaggaacaaaaggatcagc
ctgtctgatccatacattcatgaaaatccgcagacgcaggacctgtcccaaatcaacaag
tcagtatttcagcaacaagttatagtgcagaaatgtgaagagagatcctttgcatcaaaa
cgcaaaatctcactgtgcgcaggccatgacagaaccagtcagaaaccatccgacaacata
attccctcaaagattcacagaatttcaacttgtcaaaagttgtctttatgtaaggagtct
ggatcccttgagaagtttagaagagtatatggtcaagctgatgaactgaaattacactct
ctagagaataatactagacttcctcagacagacggctttgttttgaattcccagaatgtg
tctgtttgccagaaagaccagcaagatggtggtgtgaaagaaacagaaaaagaagagaaa
tgcagcagcctccaaagccctctaaacctctcagcattcgccaagttaaaaccagtccca
gtgccgaaaacaggcaaaatatctttggcagctaaactcttccatttcaaacaacacagg
acagaaaattcaaatgtattaccacaccaggacaatacctgtctcagtagtggtaatgat
ggcagccaagacggcaataacaacgagaatcactgcgacactgcactgaatcctgagcca
gtccaaggttgtcgtgaaaatcctgtactggttgaaagtcaagaggatacaacatcaggg
gactggcttcatcactacgatacatctgtgggaaagatagtttatgtcaacaaagtgact
gggctcagccggtatgaagacccggctgctgaagaaacacacgcttgctgtacatctgat
gtcaccaatatggcagttggtgtcatctctgaaatggggatggaatacagatgttaccca
tttcaggtggatctagtgttgcccttcctccctaaatccaggacagagagagtgattagt
ttagggcttgatgacagagatgaaagtgttgagaggtccaactcactgaagtcgttgtac
tccaaatggaataatcccgtgtttgtctgccctcctacggttggtgtggacatatcaagt
gggcaagccgacggtctggctgtcaaaatccacaacatcctgtttccgtaccgtttctct
aaggccatgattcactcaatgaaggttattcatcaggtggataagaagtttcttgcatgt
cttatcaatacgaaggatgaggagtctgcagcactcactgaaactgaaggaaaccttctg
gtgctggtagatcaacacgctgcacacgagagagttcgacttgaaaatctaattgcagat
tcttatgaggatgacccagatgcacctggagagagacgtctgtgttcatcaaccattttg
ccacctctcgagatcagtgtaaccgaggaagagcaaaggctgctaaggtcttgtgaagca
catttgcggagtttgggcctggaagtaaagttttcacaggcagcgaatccacaagctttg
ataggaaaggtaccgctgtgcttcatggaaaaggagagtaatgagctcagacgggggaga
caatctgttatcaagcctattgttaaggagtatcttcaagagcagattgagttgctccgc
tcaactggtagagtaagaggaactctgcccctcactgtgctgaaggtgctagcctcgcta
gcatgccatggtgccatcaaattcaatgacagcctgagtagagatgaatgctgcagcttg
gtggcatccttgtcctcctgccagttgcccttccagtgtgcccatggccgtccatccatt
gctcccttagtagacaccctacatttggacaaagacgagaaggtattacagaaacccaac
ctccaaaagctgagaagaatgtataaagcgtgggaactatatggaaatagataa
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