KEGG   Anoplopoma fimbria (sablefish): 129103348
Entry
129103348         CDS       T09102                                 
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-20
  KO
K06087  claudin
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03272  Virion - Hepatitis viruses
afb04382  Cornified envelope formation
afb04514  Cell adhesion molecule (CAM) interaction
afb04530  Tight junction
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    129103348
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    129103348
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    129103348
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    129103348
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:afb03037]
    129103348
   04147 Exosome [BR:afb04147]
    129103348
Cilium and associated proteins [BR:afb03037]
 Other cilia and associated proteins
  Stereociliary proteins
   129103348
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   129103348
  Exosomal proteins of colorectal cancer cells
   129103348
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like
Other DBs
NCBI-GeneID: 129103348
NCBI-ProteinID: XP_054469755
LinkDB
Position
15:17720208..17721023
AA seq 241 aa
MASTGMQIFGFVLALLGIMGAMVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTG
MFSCTLKYSVLSLPAYLQTARTTMVLCCVMAAMGLCLASLGLKCTRWGGGRRSKRHAAIA
SGXCFVAAGFLCLVPASWFTNEVITNFLDSSVPESNKFEPGGAVYVAFVSAGFLFVGGSI
FCMSCSGKRHGPQDLILLPPPDKLLLQQQQQQQLLQQELQHQYCSLSPLDNKTGYSLQDY
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcatccacgggcatgcagatatttggatttgtcctagcgctgttgggaatcatgggc
gccatggtggccacgctgctgcccaactggaaggtcagcgcagatgtgggctccaacatc
atcacggcgatttcccagatgcagggtctgtggatggactgcacatggtacagcacaggc
atgttcagttgcacgcttaagtattcagtgctttccctacctgcgtacttgcagactgcc
cgcaccactatggtgctctgctgcgtaatggctgccatgggcctctgcctcgcttccctg
ggactaaaatgcacacgttggggaggtggacggcgttccaagcggcacgctgcgattgcc
agtgggnggtgcttcgtcgctgccggctttctgtgtctggtgcctgcttcctggtttacc
aacgaggtcatcaccaacttcctggactcctctgtgcccgagagcaataagtttgagcct
gggggtgctgtgtacgtagcctttgtttcagcaggattcctctttgttggggggtccatc
ttctgtatgtcgtgctcgggtaaaaggcatggcccccaggacctgatcctgctccctccc
ccggacaaattgcttctccagcagcagcaacagcaacagctgctccaacaggagctacag
caccaatactgctctctctccccactagacaataagactgggtacagcctgcaggactat
gtgtga

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