Anoplopoma fimbria (sablefish): 129103370
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Entry
129103370 CDS
T09102
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129103370 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129103370 (syf2)
Spliceosome [BR:
afb03041
]
Complex B
Other components
Prp19-related factors
129103370 (syf2)
Complex C
129103370 (syf2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
HcgF
Motif
Other DBs
NCBI-GeneID:
129103370
NCBI-ProteinID:
XP_054469791
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All DBs
Position
15:complement(16767464..16773611)
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AA seq
239 aa
AA seq
DB search
MASCVEESAPATEEEPQTEATASEKREARLRKFRELHFKRNEARKLNHQEVVEEDKRLKL
PTNWEAKKARLEWELAEDEKKKECAEKGEDYHRVKLLEITAEDAERFERKKRKKNPDTGF
AGYAEAQFRQYQRLTRQIRPDMEGYEKQREDCGEDFHPTSNSLIHGTHVPTKEGIDRMVE
DVEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgtgttgaggagtctgctccagccacagaggaggagcctcagactgaagct
acagcctccgagaagagagaggcgagactgaggaagttcagagagctgcacttcaaacgg
aatgaagcacgtaagctcaatcaccaggaggttgtggaggaggacaagagactgaaactc
cctactaactgggaggctaagaaagccagactggagtgggagcttgctgaagacgagaag
aaaaaggaatgtgctgaaaaaggggaggactatcacagagtgaaactgcttgaaatcact
gctgaagacgcagagcggtttgagaggaagaaaaggaagaagaacccagacacaggattt
gcaggttatgctgaggcccaattccgacagtaccagaggctcaccaggcaaatcagacca
gacatggaaggctatgagaagcagagagaggattgcggtgaggacttccaccccacgtcc
aacagcctgatccacggaacccacgtccccacaaaggagggcattgaccgcatggtggaa
gatgttgagaaacagatagagaagcgggccaagtacagccgacgcagggcctacaacgac
gacgcagacatcgactacatcaacgagaggaatgccaagttcaacaagaaggcggagcgt
ttctacggcaaatacacagcggagatcaaacagaacctggagagaggaacagctgtctag
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