KEGG   Anoplopoma fimbria (sablefish): 129103419
Entry
129103419         CDS       T09102                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129103419
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:afb01009]
    129103419
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afb03021]
    129103419
Protein phosphatases and associated proteins [BR:afb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129103419
Transcription machinery [BR:afb03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     129103419
    Little elongation complex (LEC)
     129103419
SSDB
Motif
Pfam: ELL Occludin_ELL Seryl_tRNA_N SWIRM A_deaminase_N
Other DBs
NCBI-GeneID: 129103419
NCBI-ProteinID: XP_054469864
LinkDB
Position
15:9021994..9030681
AA seq 620 aa
MSVLKENHCYGLSSGQINRGNVSVFHVKLTDSAARAIGSFEDSKGLCSRPTICFNGNKGR
ITVPCSENRDELRIFTFGLTNTARDNPHGSFDCFQQHGACSAEELSCLGVIQKKMTVNAT
DDSYDKARQSMAQAEEETRSRGAIVIKQGGRFQSKKVTVRAPAPALASLTKPRHSDKSQS
LLGNVKRGVQVGVSKPKKGACASNRKSVGEVQERQLRERLTHLLALRPYKRPELILRLQK
DGLTAKDKDMLDSELMEVGQLNSRDNTFVLKDGLYKELQRDWPGYSSGDQQLLKRIFVRR
LFQPQQNLLTVPEAQVSPLRDTPNSSPAHRPKSSLPEEYTDPLASKKPRISHLSGKKSRD
KPRVRPAEQAAHKVVKEETGNDGKKDSLDPRKLFDSLSAVCQREAEVAKRLEPAPCAEEE
PEVTASDPPPPNPDRPPSPLIVPDLNRHTIKRKKSKHKHRDQEKDRLRNRKERRKDHSSE
DPNNKDSLYCIEPNEMLFDSSVLKADSDKADYLLKYTVISNHDQRQSYKQDFNTEYSEYR
DLHARIDGVTRQFMELDTQLKRLHHESHKYKTVRNQILQEYRKIKKSNPNYNQDKTRCEY
LHNKLAHIKKLISEYDQQQL
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgtcggtgctgaaggagaaccattgttacggactgtccagcgggcaaatcaaccgcggc
aacgtctctgtttttcatgtcaaactcactgacagcgcggcaagagccatcggttccttt
gaagacagcaagggtttgtgttcccgtcccactatctgttttaacggcaacaaagggaga
atcaccgtcccttgctctgagaatagagatgaactgaggattttcacctttggcctgacg
aacaccgcccgtgataatccgcacggaagctttgactgcttccaacagcatggcgcttgc
tctgccgaggagctgtcatgtctcggagtgattcagaagaagatgaccgtcaacgcgacg
gatgactcgtacgataaggctcgccagagcatggctcaagctgaggaggagacacgcagc
cgaggagccattgtcatcaaacaaggcgggcgcttccagagcaagaaggtaacggttcga
gccccggcccctgccctggccagcctgacaaagccccgacactccgacaagtcccagtct
ctcctcggcaacgttaagaggggagtccaagttggcgtgtccaagccgaagaagggggcc
tgtgcttcgaacaggaagagcgtgggtgaggtgcaggagaggcagctcagggaaagatta
acacatctgctggctctgaggccatacaagaggcctgagctcatcttgaggctgcagaaa
gatggactgacggcaaaagacaaagacatgctggactctgaactgatggaggttggccag
ctcaatagtagagacaacacatttgttcttaaggacggtctgtataaggagctgcagagg
gactggccaggctacagctcaggagaccagcagctccttaaacgaatctttgtcaggagg
ctgtttcaaccacaacaaaacctcctcaccgtcccagaggcccaggtcagtccactacga
gacacccccaactcctccccagcacaccggccaaaatcttccctgccagaggaatacact
gaccctttggcgagtaagaagcccaggatatcccacttgtctggcaaaaagtccagagac
aagccaagagtgaggcctgctgaacaagcggctcataaagtcgtcaaggaggagaccggg
aacgacgggaaaaaggactcgcttgatcctcggaagctttttgactccttgtcggcagtc
tgtcagcgggaagcagaagtggccaagaggctagaaccagctccctgtgcggaggaggaa
cccgaagttacagcgtcagacccccctccacccaaccctgatcgccctccgtcccctctg
atagtgcctgatctgaacagacacacaatcaaaaggaagaagagcaaacacaaacacaga
gatcaggagaaggatcggttaagaaacaggaaagaacggagaaaagatcacagttcagag
gatcccaacaataaagactccttgtactgcatagagccaaatgaaatgctgtttgactct
agcgtgctcaaagcggacagtgacaaagcagactatctattgaagtacacagtgatttcc
aatcacgaccagagacagagctacaagcaggactttaacacggagtacagcgagtacaga
gatctacacgctcgtattgacggagtgacacgacagttcatggagctggacacgcagctc
aaacggctacaccacgagtcacataaatacaagacggttcgtaatcaaattcttcaagag
tatcgcaaaatcaaaaagtccaaccccaactacaaccaggacaagactcgctgtgaatac
ctgcacaacaaactggcccacatcaagaagctcatatcagagtacgaccaacaacagctc
tga

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