Anoplopoma fimbria (sablefish): 129103465
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Entry
129103465 CDS
T09102
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04020
Calcium signaling pathway
afb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129103465 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129103465 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
afb04030
]
129103465 (ptafr)
G protein-coupled receptors [BR:
afb04030
]
Rhodopsin family
Others
Platelet activating factor
129103465 (ptafr)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
CitMHS
Motif
Other DBs
NCBI-GeneID:
129103465
NCBI-ProteinID:
XP_054469929
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Position
15:complement(24160551..24163630)
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AA seq
393 aa
AA seq
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MLPSATDQVAVNVTSRPGSWAGNGSTFLDSEFRYVLFPIAYSIIFIVGLLANIYVLFVLR
SLRGAKAMGEIRIYMTNLTIADILFVSALPFWIGYYSRHGHWVYTDFMCRLTGSFFFINT
YCSILFLGAISINRYWAVTCPLDVATSDHRCRGIIVCVVFWVLTIAMTIPFLAETGINTD
ENNVTRCFEGYQNQTDKVKKSIAATHFAIIGGFFLVFFLVVVCNFLIAIALLDQNPPQSE
FRSATILSSKSQRTMSSSTRKPKGVKRRAVQMLLAVVGVFVLSFLPHHVIQGFWTLAVLQ
ITEGWGHVEWDQKTLQALNDAHQITLLLMGLNCILDPVVYYFATRKFRGFILSHIKKLVK
GEACSHTLTSQISIDSRNQSQRHHSEHQLPEIN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgctgccctcagccacagatcaggtggccgtcaacgtgacctctcgtccgggctcttgg
gctggtaatggctcaaccttcctggactctgagtttcgttatgtcctcttcccaattgcc
tatagcatcatcttcatcgtgggcctcctcgctaacatctacgtgctgtttgtcctgcgc
tccctccgcggagccaaggccatgggtgaaatccgcatctacatgacaaacttgaccatc
gccgatatcctttttgtgagtgcccttcccttctggatcggctattacagtcggcacggt
cactgggtctacacggacttcatgtgccggctgactggctcgttcttcttcatcaacact
tactgctccatcctcttcctcggggccatcagcatcaaccgatactgggcagtcacctgt
cctttggatgtggccacttcagaccacagatgccgggggatcatcgtgtgcgttgtcttc
tgggttttgaccatagcgatgactattccatttctggcagagactgggatcaacactgat
gagaacaacgtcactcgctgtttcgaggggtaccaaaatcaaaccgataaggtgaagaaa
tctattgctgccactcattttgcaataattggagggttttttctggtcttttttctggtc
gtggtgtgtaatttccttattgctatagcattgcttgaccaaaatcctcctcagtcagag
ttccgttctgcaacgatcctatccagcaagtcccaaaggaccatgtcctcctcaactaga
aagcccaagggggtgaaacggagagctgtgcagatgttgttagcagtggtgggagtgttt
gttctgtctttcctgcctcaccatgtaattcaaggcttctggacactggcggtgttgcag
atcacagagggctggggccacgtagagtgggaccagaagacccttcaggccctcaacgac
gcacatcagatcactttgcttcttatgggcctcaactgcattttggatcctgtggtttat
tatttcgccacaaggaagttcagagggttcatcttgtcccacattaaaaagttagtgaag
ggagaagcctgctcacatacgctcacctcacagatctccatagacagcaggaatcagagc
cagagacaccatagtgagcaccagctgcccgaaattaattga
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