Anoplopoma fimbria (sablefish): 129103504
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Entry
129103504 CDS
T09102
Symbol
lingo2b
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129103504 (lingo2b)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
129103504 (lingo2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
Ig_2
ig
LRR_Zer-1
LRR_9
LRR_EndoS
V-set
LRR_6
LRRNT
LRR_R13L1-DRL21
DHU1_N
Sp38
Motif
Other DBs
NCBI-GeneID:
129103504
NCBI-ProteinID:
XP_054469980
LinkDB
All DBs
Position
15:15913221..15956526
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AA seq
622 aa
AA seq
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MTEGNVGKRDMRHPVLNHCHLFLGGALLLLLASPTLSCPARCECSAQSKSVSCHRKRLPT
IPEGIPIETRVLDLSKNKLRIITPDNFSSFQQLEDLDLSDNLISVVEPGSFRSQLALRVL
NFRSNLLQLVPAGVLSGLTNLTRLDLGHNRLVVLLDHAFQDLRRLTSLEVGDNELVFVSQ
RAFTGLLGLQSLTLERSNLTVVPTDALSHLHSLVELRMRYLSISFLKPFSFKRLSRLRRL
EIDYWPWLETLPPLSLHGLNLTTLFITNTNLSAFPGAALRNLPYLTHLNLSYCRIQHINQ
GELGQLPHLLELHLQGAHLISIEPFAFVGLKSLQLLDVSQNRLDSLESGVFASPDVLQRL
CLGGNPLVCDCRLLWLLNIHKPPSLQILDVQPECSAPEHLLGKPLRDLKEPLVSRYMTCT
KPRIGPNTTQLLMADEGQPARLSCVAEGAPRPSVVWITPHRRYVTTKSSGRVEVQPDGTL
EIKEAELHDSGVYLCIASNPAGNASLSASLAVKGLSIGDRSHFSNRSSNYQTDSNSTWGN
GTVLYNMTVPIDLKTIIISTAMGCLSFLGVVIFCFLLLFIWSRGKGRHKSNFDIEYVPRK
SNGXSADVTETSGPRRVNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggcaacgtgggtaaaagagacatgcgacacccggtcctgaaccactgccac
ctcttcttgggcggggccttgctgcttctcctggccagcccgaccctgagctgccccgcc
cgctgtgagtgctccgctcaaagcaagtcggtcagctgccaccgcaagcgcctgcccacc
atccccgaaggcattcccatcgagacgcgcgtcctggacctcagcaagaacaagctacgc
atcatcacgccggacaacttctcctcgttccagcagctggaggacctggacctcagcgac
aacctcatcagcgtagtggagcccggctcgttccgctctcagctcgccctccgcgtgctc
aactttcgcagcaacctgctccagctggttcccgccggcgtgctgtcgggcctgaccaac
ctcacccgcctcgacctcggacacaaccggctggtggttctcctggatcatgccttccaa
gatctgcgcaggttgacgtccctggaggtgggcgacaacgagctggtgttcgtctctcag
cgggccttcacgggattactcggactccaaagtctgaccctggaacgttccaatctgacc
gtggttcccactgatgctctgtcacacctgcacagcctggtggaactgcgcatgcgctac
ttgagcattagttttctaaagcctttctccttcaagaggttatcacgtctccgccgacta
gagattgattactggccctggctggaaacactgcctcccctctcactgcacggcctcaac
ctcacgacgttgttcataaccaacaccaacctgtctgccttccccggcgcggcactgcgc
aacctgccctacctcacacatctcaacttgtcctactgccgcatccagcacatcaatcag
ggagagctgggccagctcccacacctgctggagctccacctccaaggggctcatctgatt
tctattgagccctttgcattcgtgggcctcaaatctttgcagcttctggatgtgtcacag
aaccgcctggactctctggagagtggagtgtttgcctcgccagacgtcctccagaggctc
tgtctgggtggaaacccgttagtgtgcgactgcagattgctttggctgctcaatatccac
aagcccccctctctgcagattctggatgtgcagccagagtgcagtgccccggagcacctc
ctggggaaacccctccgtgacctcaaggagcctctggtctccagatacatgacctgcacc
aaaccccggattggacccaacacgacccagctgctgatggctgacgagggtcagccggcc
cgcctgagctgcgtggcagagggagcccctcggccctcagtggtgtggattacacctcac
agacgctacgtcacaaccaagagcagtggcagggtggaagtccagccagatggtaccctg
gagatcaaggaagcggagctgcacgacagcggtgtgtacttgtgcattgccagtaaccct
gctggcaacgccagcctgtctgcctctttagctgtgaagggcctgagcattggggacaga
tctcacttcagcaacaggagctcaaactatcagacagactctaacagcacatggggtaat
gggacagtactgtacaacatgacagttcccatagaccttaagactatcattatatctaca
gcaatgggctgtctgtccttcctaggtgtggtcatcttctgcttcctgcttctgttcatc
tggagcagagggaaaggacgtcataagagcaactttgatatcgagtatgtccctcgcaaa
tccaatgggncgtcagcggacgtgactgaaacaagtggcccgcgacgggtcaacatgaaa
atgatttga
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