Anoplopoma fimbria (sablefish): 129103533
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Entry
129103533 CDS
T09102
Name
(RefSeq) 5'-3' exonuclease PLD4
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00564
Glycerophospholipid metabolism
afb00565
Ether lipid metabolism
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
129103533
00565 Ether lipid metabolism
129103533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129103533
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
129103533
Membrane trafficking [BR:
afb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
129103533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
SACK1
Motif
Other DBs
NCBI-GeneID:
129103533
NCBI-ProteinID:
XP_054470021
LinkDB
All DBs
Position
15:complement(18776524..18780550)
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AA seq
483 aa
AA seq
DB search
MPCTYSRLHDRYVSSKGKSTSCVTLVVVLGCLTVIGILLAIAVLKRPPAPKDHETFPQEA
GWSNFSTDQCSMALVESIPQQMKYKGNVTLGIPLENVWKDLISMATEQVEVASFYWTLTG
EDINVNSSSDIPGRDILKDLEELPSRNVSVRLVTSVPSVPTNSTDLKILKQKGVQVRKVN
FGRLTRGVLHSKFWIVDRKHVFIGSANMDWRALTQVKELGVVVYNCSSLAKDLHKIFQSY
WVMGQSHSSLPQPWPSKYDTAINKHHPLLVRSDNVSSRLYLTGSPPSFCPPSRTQDLEAI
LSIISEAQHYVDVAVMEYFPTTRFERPQRYWPFIDEAIRTAAFERKVKMRMLISCGRDSD
PAMLPFLKSLASMDSPHQDISIQIKLYIVPVGNQTDIPYTRVNHNKYMVTDKVAYIGTSN
WSGDYFLTTAGVGLVISQHAPRPVWKTKAIQGQLRAVFDRDWNSEFAVHLADLGHHPDCA
LSR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtacgtatagcaggcttcatgaccgttatgtttcaagcaaagggaagtcgacc
agctgtgtgacattagtcgtggttttgggctgtctgacagtcatcgggatcctgcttgcc
atcgctgtgctgaaaagaccacctgccccgaaagatcatgagacgtttcctcaggaagct
ggttggagcaatttctctacggaccagtgcagcatggctctggtggagagcatccctcaa
caaatgaaatacaaaggcaatgtaacgcttgggatccctctggaaaatgtctggaaagat
ctgatctccatggcaacggaacaagtggaagtggcctctttctactggaccttaactggg
gaagacattaacgttaattcatcctctgacatacctggaagggacatcctgaaagacctt
gaagagttgccctccaggaatgtgtccgtccgattggtgaccagtgtacccagcgttcca
acaaactccacagatttaaagatcttaaaacagaaaggtgttcaggtgaggaaggtaaac
ttcgggcgcttgacaaggggcgtcctccacagcaagttctggatagttgacagaaaacat
gtgtttattggaagcgccaacatggactggagggctctcacacaggtgaaggaactggga
gtagttgtctacaactgttccagtctagcaaaggacctacataagattttccagtcctac
tgggtaatgggacaatcccacagctcccttccacagccctggccttcaaagtatgacact
gccatcaacaaacatcaccccctgctggtgagaagtgacaatgtctccagcaggctgtac
ctcacaggttctccaccatcgttctgtcctccatcgaggactcaggacctggaggctatt
ctctccatcatctcagaggcccaacactatgtggatgtagccgtcatggagtacttcccc
accacacgctttgaaaggcctcagagatactggcctttcattgatgaagccatcaggacg
gccgcattcgagagaaaagttaagatgcggatgctgatcagctgcgggcgggactctgat
ccagccatgttgcccttccttaagtctctagcctcaatggacagccctcaccaggatatc
agcatccaaataaaactgtacattgttcctgtgggtaaccagactgatattccatatacc
agagtcaaccacaataaatacatggtgactgataaagtggcctacattggtacctccaat
tggtcaggggactactttctgaccacagctggagtgggtctggtgatttcccagcatgct
cctcgccctgtatggaagaccaaggccatacagggtcagctcagggcagtctttgacaga
gactggaactctgagtttgctgtgcaccttgctgacctggggcaccacccagattgtgca
ttatcgagatga
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