Anoplopoma fimbria (sablefish): 129103545
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Entry
129103545 CDS
T09102
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2 isoform X1
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03030
DNA replication
afb03410
Base excision repair
afb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129103545 (pole2)
03410 Base excision repair
129103545 (pole2)
03420 Nucleotide excision repair
129103545 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129103545 (pole2)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129103545 (pole2)
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129103545 (pole2)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
129103545 (pole2)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
129103545 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
OB_POLE2
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
129103545
NCBI-ProteinID:
XP_054470037
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All DBs
Position
15:complement(24343926..24349948)
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AA seq
528 aa
AA seq
DB search
MDEARKVKTKVSAGFKMRGLILRPDASRYLVEVLESVNATELDDIIEKVLDAVEKQPLSS
TMIELSVVESAVQDCTQSCDETIDNVFNIIGAFDVPRYIYSMERKKFVPISMTSHSAPSL
CGLAKDKAELFRERYTILQQRIHRHQLFTPPAIGAAVEEGQNKFQLKTIEALLGSTSKLG
EVIVLGMITQLKEGKFYLEDPSGTIQLDMSKAQFHNGLYTESCFVLAEGWYEDSVFHVNG
FGFPPTESSSGTRAYYGNLNFFGGPSTTSVKASAKLKQLEEENEDAMFVIVSDVWLDSVE
VMEKLNLMFSGYASMPPTCFIFCGNFSSAPYGKTQIKSLKESLKVLADAICAYPSIHSSC
RFVFVPGPEDPGPGTILPRPPLADHITEEFRQRVPFSVFTTNPCRIQYCTQEIVIIREDL
VNKMCRNCVRLPNNNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYSLRVYPVPDVII
FADKYDPFSIKNTDCLCVNPSSFPRSGFTFKVYYPSSRTVEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagctcgcaaagtaaagacaaaagtgtccgctggcttcaagatgcggggactt
attctacggcctgatgccagccggtaccttgtggaggtcctggagtctgttaatgccact
gaactggatgatattattgaaaaggtcttggatgcagtggaaaagcaaccattgtcctct
actatgatagagctgtctgtggtggagagtgcagttcaggattgcactcagtcttgtgat
gaaaccatagataatgtttttaacattattggagcctttgatgtgcccagatacatttac
agcatggagcggaagaaatttgtacccattagcatgacgagccattcagcaccaagtctg
tgtggtttggccaaagacaaagcggagctcttcagggagcgctacaccatcttacaacag
cgtatccatcggcaccagctcttcaccccacctgcaataggagctgctgttgaagagggt
caaaacaaatttcagctcaagacaattgaagcgctgcttggtagcacatctaaactggga
gaagtgattgtactggggatgatcacacaactgaaagagggtaaattttacctggaggac
ccaagtggaacaatacagcttgacatgtccaaagcacagtttcataatggcctgtacaca
gaatcctgttttgtactggcagagggttggtacgaggactctgttttccacgtcaatggc
ttcgggtttccaccaacagagtcgtcatcgggcacaagggcatactacggcaatctgaac
ttctttggtggtccatccaccacttcggtgaaggcttcagccaagctgaagcagctggag
gaggagaatgaagatgccatgtttgtaattgtttctgatgtgtggttggacagtgtggaa
gtgatggaaaagctcaaccttatgttctcaggctatgcttcaatgcctcctacctgtttc
attttttgtggaaacttctcttctgccccgtatggaaaaacacagatcaaatcactcaaa
gagtcattgaaggttcttgctgatgctatatgtgcataccccagcattcacagcagttgt
cgctttgtgtttgttcctggccctgaagaccctggcccaggcaccatcctgccacggcct
cctttggcagatcacatcacagaggagttccgacagagggtgccattttccgtgttcact
actaacccatgcaggatccagtactgcacccaagagattgtcatcatcagggaagacctg
gtcaacaagatgtgcaggaactgcgtccggttacccaataacaatcttgacattccaaac
cattttgttaagaccatcttatcccagggtcacttgactccactgcctctgtatgtcagt
cctgttttctgggcatacgactactccctgcgtgtctacccagtccctgatgtcatcatc
ttcgcagacaaatacgacccattcagcattaaaaacacagactgcctctgtgtcaaccca
agctcattcccaagaagtggctttacatttaaggtgtattacccatccagcagaactgtt
gaggacagcaaacttcaaggactctga
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