KEGG   Anoplopoma fimbria (sablefish): 129103598
Entry
129103598         CDS       T09102                                 
Symbol
syne3
Name
(RefSeq) nesprin-3
  KO
K21761  nesprin-3
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129103598 (syne3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afb03036]
    129103598 (syne3)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   LINC complex
    129103598 (syne3)
SSDB
Motif
Pfam: Spectrin_SYNE1_2 KASH SYNE3 Spectrin_SYNE1 SR_desmoplakin_3 Swi5
Other DBs
NCBI-GeneID: 129103598
NCBI-ProteinID: XP_054470113
LinkDB
Position
15:complement(11819571..11860996)
AA seq 1151 aa
MTQQEQQEFMESLEAALSWMRAIQERLKANDNTQGPREALEGRLRETEKIHQSEHEGRVK
MDMALVAAENLLQSGDEEQRNHTQAKLKDLKSLWEETSTYIIHCHSRIEWVWLHWGEYLK
AYEEFELWLASRQRGLDVAVELQLGVKEKLWQVDQQRVVVSDIHGQALLLERLLDEAATL
HNRTQDPSVEPQAQERLQEAYNDVRDRAEERLSLLQKIAEEQQTYQGCVQRFQSWLLSKT
KELTDLMEREDTAENKLKALQALDDSVAGEEKTLQHIEGVAEAVRGNTSPSGAEMVVEEA
EELRLGWHRLRQGLCESEDGLRSSLDSHSQYMARCQRLGEDIGQLRVLLQGLDQELEEGR
EARDRTDHTEEQMVGQWRKYTGVRNTLAGEESQVELLKAQLKELFRFSEDSRHLSDDVLA
VVKEHQSVKCRATRLCSESESGLRNVLQDPLLVYAQWSHMVSQVLEASAEVTDFSHIALL
VQSIERLLKGSIQLQERLSLLQVKGDLLDSVFGPEGSDSLQGELGAAIADRELLHAQLLQ
RKSRLQGLISRTKDFGDASDLIRSKLAALRDQLVAADGLQPDILAKKSQSDQFGVILKDL
EDCEAHITALETLVPSSQSNRTQFERIHAEWKHLYKAARVKVHESEDSIAEHESFHDSLL
NIEKWLMIMKQKLESFHGPSGEWSVEGRQHEAERALGEFPEKELQLQQMEVQGQGVLERT
SEDGQVHILRDIKRLRETWLALYNMSLNLHRLLNGSTDQTQPDSWSVGGLSADSASLATE
LSLGEEACQVGAGGSRSLRGRKQDKPDGVYAAAAGSGSGGGVGGSLEGVVTGQGGQIQGN
GEGRLILSGQDDKHMSPSRTGEDSGRSLIGDQVDSSAWSVRSWKGSTGSPDGDGSTGGSG
SILAADREGTSLRSKVSYGEGSRMISGEGRVAAGEGLSPGGGAFMLFRRDPTKQPPTTPT
QHPTGATGEYRSRRREFEAWLSKENELLSGIFSSKGATLGAKEVKIRQDTLKALRAEVGW
GQEQFQLLLQESPGGDAGSGAAEDVSLEELRYRWMLYKSKLKDVGDVRSRAGAKRVQTKQ
EEPVVAEKLQKKPGLCRRVCWLALPLWLLFLALLLLAFLLPLMEEGNSCSLSNNFARSFN
VMLRYDGPPPT
NT seq 3456 nt   +upstreamnt  +downstreamnt
atgacgcagcaggagcagcaggagttcatggagagcctggaagcggccctctcctggatg
cgggctatccaggagaggctgaaggccaacgacaacacccaggggccccgtgaagccctg
gagggccgactcagagagacggagaagatccatcagtcggagcacgagggtcgtgtgaag
atggacatggcgctggtggcagctgagaaccttttgcagagcggtgacgaagagcagagg
aaccacacccaggctaagctcaaagacctgaaaagcctgtgggaggagaccagcacctat
atcatccactgtcacagccgcatagagtgggtgtggcttcactggggcgagtacctgaag
gcctacgaggagtttgagctttggctggcgagccggcagcgcggcctggatgtcgcggtg
gagctgcagctgggggtcaaggagaagctctggcaggtggaccagcagagggtggtggtg
agcgacatccacggccaggcgctgcttctggagaggctgctggacgaggccgccacgctg
cacaacagaacccaggaccccagcgtggagccccaggcccaggagaggctgcaggaggcc
tacaacgatgtcagggacagagccgaggagcgtctgtcgctgcttcagaagattgctgag
gagcagcagacgtaccaaggctgcgttcagaggttccagtcctggctgctgtcaaaaacc
aaggagctcactgatctaatggagagggaggataccgccgagaacaagctcaaagcctta
caagctctggacgacagcgtagccggcgaggagaagaccctgcagcatatcgagggagtg
gcggaggcagtgaggggcaacacctctccctctggggcggagatggtggtggaggaggcc
gaggagctgaggctgggctggcacaggctgaggcagggcctgtgtgagtctgaggacggc
ctgcgctccagcctggactcccacagtcagtacatggccagatgccagcggctgggagaa
gacatcggccagctcagggtgctgctgcaggggctggaccaggagctggaggagggccgc
gaggctagggaccgaaccgaccatacagaggagcaaatggtgggccagtggaggaaatac
acgggtgtgaggaatactctggcaggggaggagtcccaagtggaacttctcaaggctcag
ctcaaagagctcttcaggttctcggaggactcgcgtcacctttctgatgatgtcctggct
gttgtcaaagaacatcagagtgtgaaatgcagagcgaccaggctgtgttcagagtccgag
tcggggctgagaaacgtcctccaggacccgctgctggtctacgctcagtggagccacatg
gtctctcaggttctggaggcctccgccgaggtcactgacttctcccacatcgccttgctg
gtccagagtatagagcgtctgctgaagggcagcatccagctgcaggagcgtctcagcctg
ctgcaggtgaagggggacctgctggactcggtgttcggtcccgaggggtccgacagcctg
cagggcgagctgggtgccgccatcgcagacagagagctgcttcacgctcagctgctgcag
aggaagagcaggctgcagggcttaatctctagaaccaaggactttggcgacgcctctgat
ttgattcgctccaagctggccgctctccgggaccagctagtggcagctgacggcctccag
cctgacatcctggccaagaaaagccagtcagaccagttcggggtgatcctgaaggacctg
gaggactgcgaggcccacatcacggcgctggagactctggtcccgtccagtcagagcaac
aggacgcagttcgagaggatccatgccgagtggaaacacctgtacaaggcagccagggtg
aaggtgcacgagagcgaggacagcatcgcagagcacgagagcttccacgacagcctgctg
aacatagagaagtggctgatgatcatgaagcagaagctggagtccttccacggcccctca
ggagagtggagcgtagagggtcgccagcacgaagccgagagagctctgggagagtttcct
gagaaggagctgcagctgcagcagatggaggtccagggccagggggttttggagaggact
tcagaggatggacaggttcacattctgcgagacattaagcgcctacgagagacctggttg
gccctgtacaatatgagtctcaatcttcacaggctgctgaacggctccacagatcagaca
cagcctgactcatggagtgtcggaggcctgtctgcagacagcgcatccctggcgacagag
ctcagtctaggggaggaagcctgtcaggtcggggcaggaggctccaggagcctgagaggc
cgaaaacaagataagccagatggggtgtacgcagccgcggccggctctgggtctggagga
ggagtaggaggaagcctggagggggtagtgactgggcagggtggacagatccagggcaac
ggtgaaggtcgcctcattctgtctggacaagacgataaacacatgagcccgtcaaggaca
ggcgaggacagcggacgctccttgataggagaccaagtagattcctccgcttggagcgtc
cgcagctggaaaggttccaccggaagccctgacggtgatggatcaacagggggcagcggc
agcatcttggctgcagacagagagggaacatcacttaggtcaaaggtcagctatggtgag
gggagtagaatgatctccggtgaaggcagggtggcggcaggggaaggcctgagtccagga
ggaggagcgttcatgctgttcagaagggaccccaccaagcaaccaccaacaacaccaacc
caacacccaacgggggccacaggggagtacagatccaggaggagggagtttgaggcctgg
ctgtccaaagagaatgaactgctctcagggatcttcagcagcaaaggagcaacactcggc
gccaaagaagtcaagatccgacaggacacactcaaggctctgagggcagaagtgggctgg
ggtcaggagcagttccagctgctgctccaggagagtccgggcggcgatgctggttctgga
gcagcagaagacgtgagtctggaggagctccgctaccgctggatgctctacaagtccaaa
ctgaaggacgtgggagacgtcaggtccagggccggtgccaagagagtccaaaccaaacaa
gaggagccggttgtcgcagaaaagctgcaaaagaagcccggcttgtgtcggcgggtgtgt
tggctggctcttcctctgtggctcctcttcctcgctctgctgctcctggccttcctgctg
cccctcatggaggaaggcaacagctgctccctctccaacaacttcgcccggtccttcaac
gtcatgctccgttacgacggaccgccccccacatag

DBGET integrated database retrieval system