Anoplopoma fimbria (sablefish): 129103639
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Entry
129103639 CDS
T09102
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129103639 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129103639 (lrfn5a)
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GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_5
LRR_4
LRR_1
ig
Ig_2
LRR_9
C2-set_2
fn3
C2-set_3
Ig_DSCAM-DSCAML_C
Ig_5
Motif
Other DBs
NCBI-GeneID:
129103639
NCBI-ProteinID:
XP_054470185
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All DBs
Position
15:15572630..15592760
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AA seq
863 aa
AA seq
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MERLLLCVMLAVAMAVRAQVCPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFADLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLDSIPWEAIQRMISLHTLSLD
HNMLDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMTATSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQQLSGRYFWSIPEEEFLCEPPLITRYSHEMRVL
EGQRVTLRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCIS
SNPAGEAHQTIDLVIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRTIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGEGGKGVSLSMTNVHSQTNGQQSQGCTVTPSSSKHGSIGLD
DLSGGTKKRSGAAGGGGGEVCKDTITQSSDSSLPDCSTSTSVLSQPWGTRSPTAGVDEER
AQAGISSPTGTTGSLNKPKRKPAPSKPGSTCTNFSATAENLPSPRPPSSSFSTASSALLP
STPLENLNTNRNNSTSLNQTPSPYSPSTFSSPLNTLSPVPSTRFRETPILRRAPRASTSA
QAKYQTLPVEEAGRSRARRRYSLSEGGSKTHSSHQGAAAAPKIGRIMRNKRSQSMSGILL
PKDGDGDSDKGRCDSDWILESTV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgttgctgtgtgtgatgctggcagttgccatggcagtgcgggcacaggtc
tgcccgaagcgctgcgtatgtcagatcctgtcacccaacctggcaaccctctgcgccaag
aaaggtctactgtttgtaccgccgaacattgataggcatacagtggagctacggctggct
gacaactttgtcacaagtgtgaagagaaaagattttgcaaacatgacacggctagtggac
ctaacattatccagaaacaccatctcctacatcacacctcatgcctttgccgatctggaa
aacctcagagcgctacacctcaacagtaaccgacttacaaggataggcaatgatacattc
agcgggatgtcgaagctacaccacctgattctgaacaacaaccagctggtgctcatccac
cagggagcgttcaacgacctgctggccctggaagaattggaccttagttacaataacttg
gactctattccttgggaggccatccagagaatgattagcctccatacgctgagtttagac
cacaacatgttggactacattccagagggaacattttccctgctacagaaactcaaccgg
ctggacgtcacctctaataaactccaaaagctgccaccggacccactttttcaacgagca
caggtcctggccacatcagggatcatgaccgcaacttcttttgcgttgtcattcggtggg
aaccctctccactgtaactgtgagttactgtggctgcggaggctgaacagagaggacgac
ctggagacgtgcgcttcaccccaacagctctctggccgatacttctggtccatccctgag
gaggagtttctctgcgaacctccactcatcaccagatactcccatgagatgagggtgctt
gaagggcaaagagttacactcaggtgtaaggcaagaggtgacccagagccggccatccac
tggatctctcctgagggcaaactggtatctaactcctccagaacgttggtctacaccaat
ggcaccctggacatcctcatcagtacggtgaaagacacaggctccttcacttgcatctcc
tccaaccctgctggcgaagcccaccaaacaatagacctggtcattataaaactcccccac
atctccaacaacaccaacaacatccaggagcctgaccctggatcgtcagacatttccaca
tcgacccgaggcggagccaacggcagcaacgtgacgggtgacgtgaaaggcggagtggat
aagagggtggtgacggccgaggccacatcctcaacggcgctgataaagttcaacttccag
aggactattccaggcattaggatgttccagatacagtacaatggaagccaagatgactcg
ctggtttacagaatgatcccgccatccagcaaaaactttctggtcaacaacctggcagca
gggacccagtacgacctctgcgttctggccatctacgacgatgtcatcacctctctgaca
gcgacacgcgtcgtcggctgtgtgcagttcaccaccgagtcggagtacatgaggtgccat
tttatgcagtctcagttcctcggcgggactatgatcatcatcatcggagggataatagtg
gcttcggtgctcgttttcatcatcattctgatgatacgctacaaggtgtgcaaccctggt
gagggtggtaaaggcgtttcattgtcgatgaccaacgttcactcacagaccaacgggcag
cagtcacagggatgcaccgtgactcccagctcctctaaacacggctcaatcggattagac
gacctctcaggaggcacaaagaaaaggagcggagcggcaggaggaggaggaggagaagtg
tgcaaggatacgataactcagtcgtccgactcatccctgcctgactgctccacgagtacg
tcagttctcagccagccttggggaacaagaagtccaacagctggagtcgatgaggagaga
gctcaagctggcatctcgtcgccaaccggcaccaccggttcactgaacaagccaaagcgg
aagccggctccgagtaagccaggctcgacttgcaccaacttctcggccactgctgaaaac
ctcccctcccctcgccctccttcctcctccttctccactgcctcctctgctctcctcccc
tccacccctctggagaacctcaacaccaaccgcaacaactccacctctctcaaccaaacc
ccgtcgccctactccccttccactttctccagccctcttaacaccctgagccccgtgccc
tccacccgatttagagagacgccgatcttgcgcagggctccccgcgcctccacctctgcc
caagccaagtaccagactctccctgtggaggaggcagggaggagcagggcgaggaggagg
tactcgctcagtgaagggggctcaaagactcactcgtcccatcagggagcagcagcagca
cccaaaatagggcgaataatgcgaaacaaaaggagccagtcaatgagcgggattctactc
cccaaagacggggatggagactcggacaaagggcggtgcgattcagactggatcttagaa
agcacggtttga
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