Anoplopoma fimbria (sablefish): 129103744
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Entry
129103744 CDS
T09102
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129103744 (chd9)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129103744 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
HTH_CHD1_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
129103744
NCBI-ProteinID:
XP_054470311
LinkDB
All DBs
Position
2:complement(10086763..10158568)
Genome browser
AA seq
3004 aa
AA seq
DB search
MDFFNDPNLFVGGLDGLDEDGFPPAPSLVDELNLTADFEPLQVEPLDPVKHQDMMPPVTT
QRAMPSYSQQMGHYIGIKAQTPMVQPFSGPGAAGVGGGGMIADQHGQYHNAAMSQVPQSN
GLFCNSSSPMWGNQDQNGNMYHPLSQQQQQLCHQQQQQQQLHNQQLHVRQQQTQQQQHHH
PCQQQQQQQQQQEQQHRMQQQLQQQQRHQQHLLSQRQHQHINTQTMPLQQQQHHNFSFHQ
GGQSQSQQQVHHTPQQVQHQLSEPRFHSRPLPSKAYLESQTATLSGPCLQPQPGSYQLSR
GGQAFPGSGSEDPNLPFPMHSSSMVHSLPTCSVSAATAYQAAQYPAYPGEPEIPSLSQQS
TASVSMPNTTTAPLTSTVPELPGTVCQFPSAAVVRNPSNQADECAFRALRRSRETQGNKS
SEMFGESMNCFPSMASRLPSEQPQSCGATNTNGYQALGENILPSEAQDGDLEGLEPPELL
PDLLPQLEAALSQQDESNCSWVDSSQARGHEHRKPPPVEYKQEKPRKNANGPGSQQRVLS
PPVKSSSSSSSSSSSSSSSSSSSSEKRTPRRTHLQMESATLDKQEKANRIISEAIAKARQ
RGEKNIPRVMSPESFPSSSSQYRHRKREHKGNGKARLKEKACRKACIVPSSKPKQKAKIG
KIVIKIGKKKKRKPESSEESDDDPPPRHAAKDDDSKRRSNRQVKRKKYAEELEAKISDDE
VKVIVKAKKGNTAASKQPSVQLFVENPSEEDAAVVDKIMSSRIVKKEVSPGVVVEGEEFF
VKYKNYSYLHCEWATEQQLVKDKRIQQKIKRFKMKQAQRALFFADMEEDPFNPDYVEVDR
VLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQTKIEEFEQLQAVKSDSRRM
DRPPANLWKKRDQSREYMNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSIT
FLEEMYRVGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQYEMYFRD
AQGRVIRGAYRFQALITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMN
LEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSEHTFMQEFGDLKTEEQVQKLQAILKPM
MLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILERNFSFLAKGAGQANMPNLVNTM
MELRKCCNHPYLIKGAEEKILEDFREVYSPTAMDFHLQAMVQSAGKLVLIDKLLPKMKAG
GHRVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSERFVFLLC
TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMF
DRASLKLGLDKAVLQSMSGRDNSLGGGAGGGAAQQQQLSKKEIEDLLRRGAYGAIMDEED
EGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAQK
ADIDADMANGRNSLVIDTPRVRKQTRPFSATKDELAELSEGNSDSDDTKPKLRRNHDRLN
NYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTERDVESICRALLSYCLVHYRGDDK
IKSFMWDLIAPTEDGQTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIHKAEWLRKHNPE
HMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQSVLDGVDSSEIKIWVPDPDHS
ELPALWWDAICDKCLLLGVYKHGYEKYNTLRADPTLCFLERVGRPDEKAIAAEQRGNDFM
DGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDAVPVTGGGSSYWPSPSVLTARL
RRLITASQRYTKSRQILQIHQVHQTQSQSPSTMMITAPLCPLPPSFNDTLNPKMVAKLER
QQRWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAMC
RRVCRLPPKEGDSAVDTSLTIQPITEERASRTLYRVELLRQVREQVLCHQLFYERLPLCQ
MSSDLPVWWETGSHDRDLLVGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKTAQQQSR
TPTPLLHPQCQATSSVLTASPLPPPAQRDMEPVGVVPKVEPASEGEEGREKQGESWSPPP
APATPTGLEPLSEANEKEKLMVAARTKPLTPNSSESKPKKASKRSRREARHGSESDSGGS
SSSSSSRSSSTSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSDDSESEGEEGKKK
DPAATSVKGFDEDSVASLSTTQDETQDTHAAENGITNNSSHPFHGGGYMLAASYWPKDRV
IINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSASPQGSKVTK
HVAENKEFSVKLNDQEGGLKLTFQKQGVPLKRPLESEEGPQAQQQYLARLHELQSASDTG
LADITKPQCSFQTVPPGHTGQMRLNGQPMVKRRRGRRKNVEGMDLLFMNRGRVPPVPDPV
PPGWGGIGQVGMAVAPVAGFSQSSSQVPSDTDSRVPVINLKDGTRLAGDDAPRRNDLEQW
LLEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQIIN
RRNARKVGGAFAPPLKELCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPE
EVSRRGRRPKNPLAKAAAAAAATAAPNPAASTLGLNPLLANGLLSGMDLTSLQAFQQNLQ
SLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLISMSSLLGKPPQEGAGS
SEEKTKGTASGVTAEPSASKAPHTSDTKGERTEGSNTTPSSTSSSSSSATAPQSASAASA
ASGHPLSLNPLLLSSMLYPGMLLTPGLNLPASTTQPQSSNSDPTLPPARPPPPAVSQDSA
QEIARLVAERDGEEDDEALEDEEDDEEDSAEQKENSGPEGSGKAESSSSDTGSSSSSDDS
DSSD
NT seq
9015 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgaccccaacctctttgtcggaggattggatgggctggacgaggat
ggcttccccccggcaccatcgcttgtggatgagctaaacctcactgctgattttgagccc
ctccaagttgagcctctagacccagtgaagcaccaagacatgatgccaccagttactacc
caacgagccatgccttcttacagtcagcagatgggtcactacattggcattaaggcacag
actcctatggtgcagccattttcgggtcctggggccgcaggtgttggaggtggtggcatg
attgcagaccagcatggccaataccataatgccgccatgagccaagtacctcaatccaat
gggctgttctgtaacagcagcagtccaatgtggggcaaccaagaccagaatgggaatatg
taccaccccttatctcaacaacaacaacagctttgtcatcagcaacaacagcagcaacaa
ctgcacaaccagcaactgcatgtcagacaacagcaaacacagcagcaacaacaccaccac
ccgtgtcaacaacaacaacaacaacaacaacaacaggagcagcagcacagaatgcagcag
cagctgcagcaacagcaaagacatcagcaacatctgttaagccagcggcagcaccaacac
attaacacacagactatgcccctgcagcaacagcagcatcacaatttctcctttcaccag
ggagggcaatctcagagccaacaacaagttcaccatactccgcagcaggttcagcaccaa
ctatctgaaccaaggttccattcaaggcctttgccaagtaaggcttatttggaaagtcaa
actgctacactgagtgggccttgcttgcagcctcagccgggtagctaccagttgtcaagg
ggaggtcaagcctttcctggatcaggatccgaagacccgaacctgcccttccccatgcat
tcgtcatctatggttcactccctgcccacatgctcagtcagtgctgccactgcttaccaa
gctgctcagtaccctgcctatcctggagagccagaaatacccagtctcagtcagcagtcc
acagcctcagtgtctatgcccaacaccaccactgcacccctcacttctactgtgcccgag
ctcccagggacagtatgtcagtttccatcagcagcagttgtgaggaacccgtcgaaccag
gcagatgaatgtgctttccgggccctacgtcgctcccgagaaacccagggaaacaagtca
tctgagatgtttggggagtcaatgaactgctttcccagcatggccagccggctgccctct
gagcagccccagagctgcggggcgacaaacactaatggataccaagccttgggtgagaat
atcctgccatcagaggctcaggatggagacttggagggcctggagcctcctgaactactg
ccggacctcctgccccagctggaggctgctctcagccaacaggatgaatccaactgttcc
tgggtcgattccagccaggcgaggggacatgagcacagaaaaccaccacctgttgagtac
aagcaagaaaagcctcgaaagaacgctaatggtcctggcagccagcaacgggtcctcagt
cccccagtgaagagcagctcgtcgtcgtcctcctcgtcctcgtcgtcctcatcctcatcc
agctcctcgtcggagaagaggacgccacggaggacgcatcttcagatggagtcagctaca
ctggacaagcaggagaaggccaataggataatatcagaggctatcgctaaggcccggcag
cgcggggagaagaacatccccagagttatgagtccggagagtttccccagctcgtcctcg
cagtacaggcaccgtaaacgcgagcacaaaggaaacggcaaggcacggctcaaagagaag
gcctgcaggaaggcctgcatcgtgccctcctccaagcccaagcagaaggcaaagatcggg
aaaatagtcatcaagatcgggaagaagaagaagcgaaagccggagtcttcagaggagtcc
gacgatgaccctccccctcgacacgctgctaaagatgacgactccaagaggcgatccaat
cgccaggtgaagagaaagaaatacgccgaagagctggaggccaagatatctgatgatgag
gtcaaggttattgttaaagccaagaaaggcaacactgcagcatccaaacagccttctgtt
caactctttgtagagaatcccagtgaagaggatgctgctgtcgttgacaaaatcatgtct
tctcgtatcgtcaagaaggaggtctctccaggggtggtggtcgaaggagaggagtttttt
gtaaaatacaaaaactactcctacctacactgtgagtgggccacggagcagcagctggtg
aaggacaagaggattcagcagaagatcaaacgtttcaagatgaaacaagcacagagggca
ctcttctttgcagatatggaagaggacccttttaacccggactatgtagaggtagacaga
gtgctggaggtgtcgtattgtgaggacaaagacactggagaggaggtggtgtactacctg
gtgaagtggtgctctctgccttatgaagacagcacctgggagctgaaggacgacgtcgat
cagaccaagattgaagagtttgagcagctgcaggcagtcaagtcagactcgcgcaggatg
gaccggcccccagccaatctgtggaagaagagggatcagtcgagggaatacatgaatggc
aacagtctcagggactaccagctagaaggggtcaactggctcctcttcaactggtacaac
agacggaactgcatcctggcagacgagatgggcctcggaaagaccatccagtccatcaca
ttcctagaggagatgtaccgtgtgggcattaaagggccattcctcatcattgctccgctt
tccactatcgctaactgggagcgggagttccgtacctggacccatctcaatgtcatcgtc
taccatggaagcatggtcagcaggcagatgctccagcaatatgagatgtatttcagggat
gcacagggccgtgtgatacgaggtgcctacaggtttcaggctcttatcaccacgtttgag
atgatcctgggaggctgtcccgaactcaacgccatcgagtggcgctgtgttatcatcgat
gaggcccaccgcctcaagaacaagaactgcaagctgctagagggcttcaagctcatgaac
ctggagcacaaggtcctgctgacgggtactcctctccagaacacagtggaggagctcttt
agtctgctccacttcctggagccaactcgcttcccttcagaacacaccttcatgcaggag
tttggagacctcaagacggaggagcaggtacagaagctccaggctatcctgaagcccatg
atgctgcgtcggctgaaggaggacgtggagaagaagttggctcctaaagaagaaaccatc
atcgaggttgagctaaccaacattcaaaagaaatactaccgcgccatcctagagaggaac
ttctctttcctggctaaaggagctggccaggcaaatatgcccaacctggtcaacaccatg
atggaactgagaaagtgctgcaaccacccctacctcatcaaaggagcagaggagaagatc
ctagaggacttcagggaggtgtatagccccaccgcaatggactttcacctgcaagctatg
gtgcagtccgccgggaagctggtgcttattgacaaactgctgcccaagatgaaggccgga
gggcaccgggtgcttatcttctcccagatggtgcgctgccttgacatcttggaagactac
ctcattcagagaaggtacttgtatgagcgaatagacggacgtgttcgtggaaacctgcgg
caggcagctatcgaccgcttcagtaagccggactcggaacgctttgttttccttctgtgc
acaagagctggtgggctgggaatcaatctcacagccgcagacacctgcatcatctttgac
tcagactggaacccgcagaacgacttgcaggcccaggcgcgctgccatcggatcggtcag
aacaaggcagtgaaggtgtaccgtttgatcaccaggaactcgtacgagcgagaaatgttt
gatcgagccagcctcaagctgggcctggacaaagcagtgttgcagagcatgagtggccga
gataacagcctgggtggaggtgccgggggaggggcagcgcagcagcagcagctgtctaag
aaggagattgaggatctgctgcgtcgtggtgcttacggggccatcatggatgaggaggat
gaaggggccaaattctgtgaggaagatatcgatcagatcctccagcgcaggacaaagacc
atcaccatcgagtctgagggacgaggatccacttttgctaaggccagttttgtggcgtcc
ggaaaccgcacagacatctccctggatgacccaaacttctgggacaaatgggcccaaaag
gctgacattgatgcggatatggcaaacggcagaaacagcttggtgatcgacactcctcgt
gtcagaaagcagacaaggccgttcagtgccaccaaggacgagttggcagagctttcagag
ggcaacagcgacagtgacgacaccaagcccaagctcaggcgaaaccacgaccgcctcaac
aactatggacgcacagagtgcttcagagtagagaagaacctacttgtttatgggtggggt
cgttggaaggatattctcaatcatgggcgttttaagaagcagctgacagagagggatgtg
gagtccatatgcagggctctgctgtcttactgcctggtccattaccgtggagatgacaaa
atcaaaagcttcatgtgggacctgatagcccctactgaggacggacaaaccaaggagctg
cagaatcacctgggtttgtccgctccagtccctcgtggcagaaagggtaagaagatgaaa
acccagtccagctcctttgacatccacaaagctgagtggctcaggaaacacaacccagag
cacatgcttcaggacgacggctacaagaaacacctcaaacaccactgcaacaaggtgctg
ctcagggtcagaatgctctactacctgaaacaagaggtgataggaagccaggcccagagc
gtgctagacggcgtggactccagtgagataaagatctgggtgccagaccctgaccattcg
gagctgccagccttgtggtgggatgccatctgtgacaagtgtctgctgctgggtgtctat
aagcatggttatgagaagtacaacacgctccgtgcagaccctaccctgtgcttcctagag
cgtgtggggcgaccggatgagaaggccatcgctgcagaacagagaggcaacgatttcatg
gatggtgatgtggatgacccagagtacaagcctgctccagctctgctgaaggacgatatg
gaggatgacgcctcttctcctggagacttggttgtcactgacaacgccggagacgcagtt
ccagtgacgggaggtggatcttcctactggccctcaccctcggtgctaacagccagactg
aggcgactgatcacagcctctcagcgctacaccaagagccggcagattctccagatccac
caggtccaccagactcaatctcagtctccgtcgaccatgatgataactgctccactctgt
ccgctgccgccctcatttaacgacaccctcaaccccaagatggtagctaagcttgaacgg
caacaaagatggaccaggcgagaagaagctgacttctaccgcgtggtctccacttttggg
gttgttttcgacccaaacctcggccggttcgactggaccaagttcagggccatggctcgg
ctgcacaagaagactgacgagagcctgcagaaatacctgtgtgcttttaccgccatgtgc
cgaagggtgtgtcgcctgccacccaaagagggagactctgcggtggatacgtctctgacc
atccagcccatcacggaggagcgagcgtctcgtacactgtacagagtagagttgcttcgc
caggtgagggaacaggttctgtgccatcagttattctacgagcgcctgccgttgtgccag
atgagctctgacttgcccgtctggtgggagactggttcccatgaccgtgacctgctagtg
ggagctgccaaacatggcgtcagccgcacagattaccacattctgagagaccccgagctc
agcttcatggctgcacaacgcaactacagccaaacaaaaactgcacagcagcaatcacgc
acacccaccccactcctacaccctcagtgccaggccaccagctcagtgttgacagcttct
ccgctgcctccgcctgcccagagagacatggagcccgttggggttgtacccaaagtggaa
ccagcctcagagggggaggagggccgggagaagcagggggagagttggagccctcctcca
gcacctgctactcccacaggtctggagccgttgtctgaagcgaatgaaaaagagaagctg
atggtggcggcacgaaccaaaccgctcacacccaactcctccgagagtaaacctaagaag
gccagcaagaggagtcgcagagaggccaggcacggctcagagtccgactcaggtggctcc
tcctcaagctcttcatcgcgctcctcttccacctcatcatcctcctcttcttcctcgtcc
cattccgggtccagctcctcctcctcttcatcatcctgctcctctggctcttcatcatca
tcgtcctcctcctcatcttctgatgacagtgaaagtgaaggagaggaagggaagaagaaa
gatcctgcagcaacaagtgtgaagggctttgatgaggacagtgtggcgtctctgagcacg
acgcaggacgaaacccaagacacgcatgcagccgagaacggcatcaccaacaactcctca
catcctttccatggaggaggatacatgctcgctgcatcctactggccaaaggatcgcgtg
atcatcaaccgcctggacagcatctgccaggcggtgctaaagggcaagtggcccggaaca
cgtcgggtctacgagcctggaggtgcagtggcctccttctacaccaccaagctgctggac
aacgccaacagcctgtgcgaggacccctctgcctcaccacaggggtcaaaggtgaccaag
catgttgcagaaaacaaggagttctcagtaaaactcaacgatcaggagggaggtctgaag
ttgaccttccagaaacaaggtgtacctctgaagaggcccctggagtcggaggagggcccc
caggcccagcagcagtacctggcgcggcttcatgagctgcagagcgcctcggacacaggc
ctggctgacatcaccaagcctcagtgcagcttccagactgtgcctccaggtcatactggt
cagatgaggctgaacggtcagccaatggtgaagaggcggaggggaaggaggaagaacgtg
gaggggatggacctgctcttcatgaacaggggccgagtccctcctgttcctgatccggtg
cctccaggatggggcggtattggccaggtgggcatggctgtggcccctgtggcgggcttc
agccagagctccagtcaggtcccctcggacaccgacagcagggtccctgtcatcaacctc
aaagatggcacccggcttgctggggatgatgctcccaggaggaatgatcttgaacagtgg
ctattagagcaccctggctttgtggcggacacaggagcttttatccctggtgtgaataag
atgcaaatgcagttccacttccaggacgggcggcccaagcagaagaggcaccgctgcagg
aaccccaacaagattgatgtgaacagtctgacaggagaggagagggttcagatcatcaac
aggagaaatgcccgcaaggttggtggcgcctttgctcctcctctgaaggaactgtgtcgg
ttccttcaggagaaccccgagtacggagtcccacctgaatgggctgacgtggtcaaacag
tcgggttacctcccagagagcatgtttgacagaatcctgacgggacccatcgttcctgag
gaggtgagccggcgtgggcgacgacccaagaatcctctggccaaggcagctgcagcagcg
gcagccacagcagcgcccaacccagcagcctccaccctgggtctgaaccccctgctggcc
aacggcctcctctctgggatggacctgaccagcctgcaggccttccagcaaaacctccag
agcttacagtccctgcagctcaccgcgggcttgatggggctgccgtccgacgccagcaac
ctggctgcaagtaacctggcggccatgtttcccatgatgctgtctgggatggctggattg
ccaaacctgattagcatgagtagcttgcttgggaagccccctcaggagggcgcaggaagc
tctgaggagaagacaaagggaaccgccagcggtgtaacagcagagccgtctgcctctaaa
gcccctcacacctcagacaccaaaggagaaaggacagaggggtcgaacacgactccttcc
tccacttccagctcctcttcctctgccaccgccccacaaagtgcttcagctgcctctgca
gcctccggtcacccactgtctcttaaccccttgttactctccagtatgctttacccaggg
atgcttctcactccaggccttaaccttcctgcgtctaccacacagccgcagagctcaaac
agtgaccccacccttcctcccgctcgtcctcctccgcctgcagtctcccaggattcggca
caggagatagcgcggctagtggcagagagggacggagaagaggatgacgaggcattagaa
gacgaagaagacgacgaggaggactcagcagaacaaaaggagaacagtggtcctgagggt
tcggggaaagctgagtcatcttcatcagatactgggagctcttcttcatcagatgattca
gactctagtgattag
DBGET
integrated database retrieval system
