KEGG   Anoplopoma fimbria (sablefish): 129103786
Entry
129103786         CDS       T09102                                 
Symbol
pals1a
Name
(RefSeq) protein PALS1
  KO
K06091  MAGUK p55 subfamily member 5
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04519  Cadherin signaling
afb04530  Tight junction
Brite
KEGG Orthology (KO) [BR:afb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    129103786 (pals1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    129103786 (pals1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:afb04990]
    129103786 (pals1a)
Domain-containing proteins not elsewhere classified [BR:afb04990]
 PDZ domain-containing proteins
  MAGUK family proteins
   129103786 (pals1a)
SSDB
Motif
Pfam: Guanylate_kin L27_N PDZ SH3_2 PDZ_6 SH3_1 L27 PDZ_2 SH3_9 Cu_amine_oxid MMR_HSR1
Other DBs
NCBI-GeneID: 129103786
NCBI-ProteinID: XP_054470356
LinkDB
Position
15
AA seq 675 aa
MTTSHLNGHVADEGGGGGGGGGGGDEELRGGQQHREMAVDCPGELGSRTLPVRRSAQLER
IRQHQEDLRRRREEEGRQLDLNTSLRLRKLSQHPHIGIDNPTFLQDSQTSQQPPLGSQHT
HALLELEELLLSLKQVRGCLSDQQSQNDVELVLALLNKSDFQSALKIHNAVATSMHRPSP
PYPHTHQALQLAMETRSLIQSSQNKEGLELHSLLSDTHIQSLLLAHDSIAETEMQPEPLP
SEGEMLTQWGGETVKIVRIEKAQDIPLGATVRNEMDSVVISRIVRGGAAERSGLLSEGDE
ILEINGIEIRGKDVNQVFDILADMHGLLTFVLIPNIQSKPPPVKESVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHIISQSDPNWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKRKRKKLLYNTHRNDDIDNEEILTYEEMALYHQPANRKR
PIALIGPTSCGQAELRQRLLNSQPERFAGAVPHTTRSRRDCELSGRDYHFVSRQTFEAEL
AAGKLIESGEFEKNLYGTSSDSVRQVINTGKICLLCLHTQALKVLRSSDLKPYIIFIAPP
SQERLRALLAKDNKNPKPEELRDIIEKAREMEQSCGHLFDAVIVNTDQDKAFNELLRLIN
KLDTEPQWVPCSWLR
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgacgacctcccatctgaacggccatgtcgctgacgagggaggaggaggaggaggagga
ggaggaggaggagacgaagagctgaggggaggacagcagcaccgggagatggccgtcgac
tgtccgggagagctggggagtcgaacgctgccggtccgaaggtccgcacagctggagagg
atacgacagcaccaggaggatctccgtcgtcgcagagaggaggagggtcggcagctggac
ctgaacacctcgctcagactcagaaagctctcccagcatccccacatcggcatcgacaac
cccacattcctgcaggactcgcaaacatcgcagcagccgccgctcggcagccagcacaca
cacgcactgctggagttggaggagttgctgctgtcactcaagcaggtccggggctgcctg
tctgaccagcagagtcagaatgacgtagagctggttctcgcactacttaacaagtctgac
ttccagtcagcgctgaagatccataatgcagtggccaccagcatgcaccgaccctctcct
ccgtacccacacacacaccaggccctccagctggccatggagactaggagtctcatccag
tcaagtcagaacaaagagggcctggagctccacagcctgctgtcagacacacacatccag
tcgttgctcctggcccatgacagcatagcggagacggagatgcagcctgagccgctgccc
tctgaaggagagatgctgacccagtggggaggagagactgtgaagatagttcgcatagag
aaagcccaagacataccactgggggcgactgtccgtaatgagatggacagcgtagtgatc
agccgcatcgttcgaggtggagcagctgaacggagtggacttctatcagaaggagatgaa
atcctggagataaacggcatagagatcagagggaaagatgtcaaccaagtctttgacatt
cttgcggacatgcacggcctgctgaccttcgtgcttattcccaacattcagagcaaacct
cctcccgtcaaagagtctgtgatccacgtgaaagcccattttgactacgacccctcagat
gacccctacgtgccgtgcagagagctgggcttgtccttccagaaaggagacatcctccac
atcatcagccagtccgatcccaactggtggcaggcgtacagggacggagacgaggacaac
cagcctctagctggactggtaccagggaagagtttccagcagcaaagagaagccatgaaa
cagaccatagaagaagacaaggagccagagaagtctgggaagctgtggtgcgcgaagaag
aacaagaggaagagaaagaagctgctgtacaacactcacaggaacgatgacattgataac
gaggagattctcacctatgaggagatggctctgtaccaccagccggccaataggaagcgg
cccattgcactgattggtccaaccagctgcgggcaggcggagctcagacagagactgctc
aacagccaaccagaacgcttcgctggagctgtaccccacaccacgcggagccgtcgggat
tgcgagctgagtggtcgagattaccactttgtgtctcgtcagacctttgaggcagaactg
gcagcaggaaagctgatcgagtccggtgagtttgagaagaacctgtacgggacgagttca
gactcagtgagacaagtcatcaacactggaaagatctgtctgctctgtctgcacacacag
gctcttaaggtgctgcggagttctgacttaaagccttacatcatcttcatagctccgccc
tcccaggaaagactccgagccttattggctaaagacaacaagaacccaaagcccgaggag
ctgcgggacatcattgagaaagcccgggagatggagcagagctgcggtcacctgtttgac
gccgtcatcgtcaacacggaccaggacaaagccttcaacgagctgctacgactcatcaac
aagctggacactgaaccacagtgggtgccctgctcctggctgcgctga

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