Anoplopoma fimbria (sablefish): 129103793
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Entry
129103793 CDS
T09102
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129103793 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Other domain-containing proteins
Tubby family proteins
129103793 (tulp4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_ELP1_1st
WDR55
Motif
Other DBs
NCBI-GeneID:
129103793
NCBI-ProteinID:
XP_054470365
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All DBs
Position
15:6772228..6783471
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AA seq
1602 aa
AA seq
DB search
MLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPDFLVEDSTESDTDSDDNILP
LVRRVKPLLTVTFLSGDISLMNNYDDLSPAVIRSGLKDVEAQWCSQGDLLAVAGMERHGL
PVDSACSSIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLFLACGPALYVVR
VEHRVASLQLLCQQGIASALREEKDVGKLNMPSLLCSYVTTAFIPTIKPPIPDPNNIRDF
VSYPTAGNERLHCTMKRAEDSPETGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KMDSKTEEVCVNPMISYTDSCNCSDSSDIELSDEWVGKKSPKLSRGNRSLKVYMMNMELR
KSPKLSRINHEGQRSPRLPTKKPPVRSPSLTRREFSMDGITEHNYLAQVTSNIWGTKFKI
VGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISHDFMSLPVFNPNVFSEDEDDL
PVMGPSGVAGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNIQLDVLTNPTAT
AAAAAAAAAASVPVTDHGQDAVPSPYPVPTRYSNPGQVIFNGLEMGPLLPGTLPPPPPPQ
HLPPQPHPQRPHSQGEHAHTLKPSLPRTLPPFSDMDGSIEIQMRKVNPPPPYPGTVVSVA
TATAVATPQTLVTNCDSPSVLSPDPCLKKDEFLLHPVTLQYPTPLGYERITTFDSSGNVE
EVCRPRRRLVRNQNAYAVHGIGGSATLKVTSSENKKIQLPYSSATLSRLSVPRYSIPSGD
PPPYPDPANQVTATLPPPQRIDSSLIHATLRRDRRDVGLKVPQMMESSRTLPTKAKMNSA
LALTYQQRLPTALYTCTQCSSNSSSTSVSVSGGGTMSSGIAGGTVVRQDFPPGKGAHHST
IIVHSKSTSPMASQSSYSLLSAMDNSRDRTVYVNSAFTEDETLNQQCHLEKSVRQLTLGD
VSLTVKRPPPYQWDTSTTEEFWLTPEQTMLGPPPGPHKPPPLIISQAQHLDMTRLPFVLT
TKPPTSQTTSTLTFPSGYQISLAPFPPGVGHSGPSLQTLQNPSPGEVVGSVSFAQQEPNL
VLPPGYPPSLANLACCPLPPMYPGASSCAGLQLHPVNLHPWNPYPCPPPMQDPPAPPLPT
KTHQILEKPILSPPPPSGPPPPPPLPPPPPPTELPPSKSSTEDLAESANNFLEPSSLNDS
PVPQESERFNKKSRKRLDSRAEEANMTTVSEGKSRKEGRALSDFNTLISSPRLGSREKKK
PKGQREQLNKTKKMNRTTNEFQDSSESEPELFISGDELMNQNQSSKKSWKNKRSMRMASE
LEEIKCRKANEREDRSLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIEL
DGRQVMQFGRIDGNGYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgttggccgccgtggaacatggtcccatcctctgcagcgactccaacatcctctgcctc
tcgtggaaaggcagggtccccaagagtgaaaaggacaagccggtgtgccggaggcggtac
tatgaggagggctggctcgccacggggaacggaagaggagttgtcggggtgacgtttaca
tcgagtcactgcaggagggacagaagcacgcctcagagaatcaattttaatctgcgagga
cacaacagcgaggttgtccttgtgcgttggaatgaaccctttcagaagctggccacatgt
gatatggaaggaggtatttttgtatggatccagtatgaaggaagatggtctgtagagttg
gtgaatgacagaggagcccaggtgagtgacttcacttggtcacatgatggcactcaagcc
ctcatagcgtaccgggatggctttgtgttagttggctcggtcagcggacaaagacactgg
tcctcggagattaacctggagagtcaaatcacctgtggcatctggacgcctgatgatcaa
caggtcttgtttggtacagcagatggtcaggtgatagtgatggactgtcacggacgaatg
ctcgcccacgtactgttgcacgagtctgacgggatcgtgagcatgtcatggaactgtcct
gactttctggttgaggacagcacagagagcgacacagactctgatgacaatattctgcct
ttagtgcgcagagtaaagcctttgttgacagtcaccttcctatcaggagatatcagttta
atgaacaactatgacgacctgtctcctgccgtaatccgttcagggctgaaagatgttgag
gcccagtggtgctcccagggggacctcctggctgtggccggcatggagagacacgggctt
cccgtcgactctgcctgctcctccatcatgaggaatgccctcgttaaattctataatgtc
caaggagagcacatctacactttggaaacaccggcacagagacccatcaccaccatctgt
tggggtcacagagactctcgcctgttccttgcatgtggaccggccctgtatgtggtgcgt
gtggagcacagggtggccagcctccaacttttatgccagcaggggattgccagcgccctg
cgagaggagaaagacgtggggaagctgaacatgccctcgctgctctgctcttatgtcacc
actgcttttatacccaccatcaagcccccaatccctgaccccaacaacatccgtgacttt
gtcagctatcccacagctgggaatgagaggctccactgcaccatgaagagggccgaggac
agccctgagacaggcggaccctgctacactctatacctagaatatttaggaggactggtg
cccattctcaaaggaaggcgcatcagtaaattacggcccgagtttgtcattatggatcca
aaaatggacagcaaaacagaggaagtgtgtgtgaatcccatgatctcatacactgacagc
tgtaactgctctgactccagtgacattgagttgagcgatgagtgggtcgggaagaagtca
ccaaagttatcccgaggaaacaggtcattaaaagtctacatgatgaacatggaattgaga
aaatctcccaaactttcacgcatcaatcatgaaggccaacggtcgccgcggttaccaaca
aagaagcctccagttcggtctcccagtctgacgcgtcgagagttttctatggatgggatc
acggagcataactaccttgctcaagtgacatccaacatttgggggacaaaattcaaaatt
gttggacttgcttcttttctccctgccaatcttggtgcagtcatctataagacaagtttg
cttcatctacaaccgagacagatgacaatctaccttccagaagtgcgaaagatttctcat
gacttcatgagcttgcctgtgttcaaccccaatgtgttcagtgaggatgaagatgactta
ccagtgatggggccctctggagtggcaggagacaatcctccctgtacagtcaacatcccc
attgctcccatccacagtccggctcaggcaatgtctccaactcagagtatcggcctggtt
cagtctcttctggccaatcagaacattcagcttgatgtcctgaccaaccctacagccact
gcagcagctgcagctgcagcggcagcagcttctgtccctgttacggatcatgggcaggat
gcagttccatcaccgtatccagtaccaactagatactcaaaccccggtcaagtgatcttc
aacgggctagagatgggtcctctccttcccggtactcttcctcctccacctccacctcaa
catctcccaccgcagcctcacccgcagcggccgcattcacaaggggagcacgcacacact
cttaagccaagtctgccgcggactttaccccccttcagtgacatggatggatccatagag
attcagatgaggaaggtgaatcctcctcctccatacccgggcactgtagtgtctgtagcg
acagctacagccgtcgctacgcctcaaactcttgtcacaaactgtgacagcccaagtgtc
ctgtcgccagacccctgcctgaagaaggacgagtttttgctacaccctgtcactttacag
tacccgacacctctggggtatgaaaggatcacgacctttgacagcagtggaaacgtggag
gaggtttgcaggccacgcaggcgcctcgttcgcaaccaaaatgcgtatgccgtccacggc
atcggaggctcggccacgctcaaagtcacctcctctgagaacaaaaaaattcagcttccc
tacagctccgcaacattgagtcgtctctctgtccctagatactcaatacctagtggggac
cctcctccttaccctgatccagccaatcaagtaactgctacactccctcctccacagaga
atcgatagcagtctgattcatgccactttacgtcgtgaccgcagggacgtgggacttaaa
gtaccacagatgatggaaagctcacgaaccctccccaccaaggctaaaatgaacagtgca
ctggcactcacctaccagcagaggttgcccacagcgttgtacacatgcacacagtgcagc
agtaacagcagcagcaccagtgtcagtgttagtggtggagggactatgagtagtggcatc
gcgggcggcacggtggtgaggcaggacttcccaccaggtaaaggggcacatcacagtacc
attatcgtgcactccaaaagtacctcgcccatggcctctcagtcatcctacagtctgctg
agtgctatggacaacagcagggacagaacggtgtatgtcaactccgcctttaccgaagac
gagactttgaatcagcagtgtcaccttgaaaagtctgtacgtcagctgactctcggcgac
gtcagtttgacagtcaaacgccctccgccttaccagtgggacacgtccaccacagaggag
ttctggctcactccagaacaaacaatgttaggtcctccaccgggtcctcataaaccgcct
ccgctcatcatcagtcaagctcagcacttggacatgactcggctaccgtttgtcctcacg
actaaacctccaaccagtcagaccacgagcactctcactttcccgtccggttaccagata
tctctcgctccttttcctccgggtgttggtcacagtggtccttctcttcagaccttacag
aacccttcgccaggtgaagtggttggttcagtctcttttgctcagcaggaacccaacctg
gtcttgccaccaggctatcctccaagtcttgctaacctggcctgctgccctctccctccg
atgtatccaggagccagctcatgtgccggacttcagctgcaccccgtcaaccttcacccc
tggaacccttacccctgtcctcctcccatgcaagaccctccagcgcctcccctccctacc
aaaactcaccagattttagagaagcctatcctctcgccacctcctccttctgggccaccc
ccaccacctcctctccccccgcctcctccacctaccgagctaccaccttccaaaagttcc
acagaggatctagcagagtctgccaacaacttcctagagccatcatctctaaacgacagc
ccagtgccacaggagtcagagcgcttcaacaagaagagccgcaaaagactggacagcaga
gccgaggaagccaacatgaccaccgtctctgagggaaaatctagaaaggaagggcgtgcg
ctctccgacttcaacactctcatttccagcccaaggctcggcagcagggagaagaagaag
cccaaggggcagagagagcaactcaataaaaccaagaagatgaacaggaccacaaatgag
ttccaggacagctcggagagcgagccggagctgttcatcagcggcgatgagctcatgaac
cagaaccagagcagtaagaagagctggaagaacaagcgcagcatgcgcatggcaagcgag
ctggaggagatcaagtgccgcaaggcaaatgaaagagaggaccggagtttgggaagccag
gggttcgtctatgttatggccaataaacaaccattgtggaacgaagccacccaggtctac
cagctcgattttggaggacgagtcacacaggagtcggcaaagaattttcaaattgagctg
gatggtagacaggtgatgcagtttgggcgaattgatgggaacggctacatcttggatttc
cagtatcctttctcagcagtgcaggcatttgctgttgccttagccaatgtaactcaaagg
ctgaaatga
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