Anoplopoma fimbria (sablefish): 129103811
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Entry
129103811 CDS
T09102
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04217
Necroptosis
afb04622
RIG-I-like receptor signaling pathway
afb04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129103811 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129103811 (cylda)
04625 C-type lectin receptor signaling pathway
129103811 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129103811 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129103811 (cylda)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129103811 (cylda)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C67
129103811 (cylda)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129103811 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
129103811
NCBI-ProteinID:
XP_054470393
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All DBs
Position
2:9599473..9621264
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AA seq
956 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVIKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLGLDERDVLELDEKLAELLFPITNCEERYALLCNKSRLERVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDEALGKLEVDHVNPVEDDQDFPPLEINSRVLVQTR
DGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVFDGKLLCSFASLEHTRLVPICD
VMPEYSMQDQRLQKHSFAPRGTNSDKSSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPPASLSSDNKFHSLPFSL
NRKTGPIDSMSHGPLSLSVQSVMGEQPEPSSPAAPPSPRPSTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYKETQELLRTEIVNPLRIHGYVCATKVM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLRLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKTHRHGKLSV
PKELQDGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYGNADSAWLFFDSMADRDGGQNG
FNIPQVSPCPEVETYLKMTPEELHTLDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtcataaaggagtgtacggtggagaagcctccccagaagaccctgaggatc
ccccgtggcagtctcggtcaggcctgccaggagcgcaacagcctggggcgaacactgccc
ccgtgcaaaggcaaaaaaagtctccgcatcctggaccaaaccaacgtggtgctgggcctg
gacgagcgggacgtcttggagctggacgagaagctggctgagctgctgttccccatcacc
aactgtgaggagcggtatgccctcctgtgcaacaagtcacgcctagagcgcgtccgtgat
attgactgtggttcgaaggtgcgcgtccagctgcgctcaggggatgaacctctgcctggt
gtggttcgcttcaagggctcgctgctccctgacagagccctctctggaatctggtttgga
gtggagctgttggaggagggccggggccagggcttcacggagggctcctaccagggcaga
caacttttccgctgtgaggacgagtgcggtgtctttgtggccctggacaagctcgaactc
tgggaggatgatgatgacgaagccttgggcaagctggaggtggaccacgtcaatccagtg
gaagatgaccaggacttccctccactggagatcaactccagggtcctggtgcagaccagg
gacgggccagagagaggcaccatcattttttgtgatctgctgccaggcaatgagagcctg
gggtactatgtgggagttgacatggacaatcctatcggggactgggatggtgtgttcgat
gggaagttgctgtgtagtttcgccagtttggagcacactcgactcgtgcccatctgtgac
gtaatgccagaatattccatgcaggaccaaaggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgacaagtcgtcctctggccaaagcaaaccaaagagcaaaggattaggt
catcagtgtggcagtagaagcaagtctgaattttactatactttaaatggcagctctgtt
gatccccccgcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggac
cccgccaagtcacttactgacacgccccctgacttcaaccagtcctccccgccctccaga
gccccgccccctgcctcgctttccagcgacaacaagttccactctctgcccttcagcctg
aacaggaagaccgggcccattgacagcatgagccatgggcctctctccctttctgtccag
tcggtgatgggagagcagcccgagccctcgtcacccgctgcccctccctcaccgcgtcct
tcgacacctcccagaggacagccaggtctggaggtgggctctctggtggaggtgaaggag
aacccccccttgtgtggtgtcatccgctgggtgggccttcctcctggcctgctggagcct
ttggctgggctagagctggaggaagagtgccccggttgcactgatggcaccttcaaaggt
acacggtacttcacctgcccccccaaaaaggccctgttcgttaagctcaagtgctgccgg
cccgactcccgcttcccgtccctgcatcactcctccaaccccatagagcggtgcaactcc
atcgcatttggagggtacctaagtgaggtcgtacatgagaacacgcctcctcgcacagag
aatgatggtctggatgtcatggtaggaaaaaagaaaggcatccagggccactacaactcc
tgctacctggattcaaccctcttctgtctgttctccttcagctctgtactggacactgtt
ctgctaagaccacgctcaaagacagatgtggagtattacaaagagacccaagaactgtta
cgcacagagatagtcaaccccctgcgcatacacgggtatgtctgtgctactaaagtgatg
aagctaaggaggatcctggagaaagtagaagctgcctctgggttcacatctgaagaaaaa
gatcctgaggagttccttaatatactttttcatcacatactgagggtggatccgttgctc
aggctcaggtcggcaggacagaaggtccaggactgttacttctaccagatcttcatggac
aagaaggacaaggtgggagttcccaccatccagcagctcctggagtggtctttcatcaac
agcgaccttaaatttgcagaggctccctcctgccttatcatccagatgccccgctttggc
aaggacttcaaaatgttcaacaagattttcccctcgctagagttagacatcacagacctt
cttgaagacactccaagggaatgtcgaatctgcggaggcctggcactctacgagtgtcga
gactgttatgaggacggggatatcacggctggcaagattaaacagttctgtgaaaagtgc
aatacacaggttcatctccacccgaggaggaaaacccatcggcatggcaaactgtctgtc
ccaaaggagctgcaagacggtacggggcggcagggcagtttcccccgccagaggatggag
ctgttcgccgtgctgtgcatcgaaaccagtcactacgtggccttcgtcaagtacggcaac
gcagattccgcctggctcttcttcgacagtatggctgaccgtgatggcgggcagaacggt
ttcaacatcccccaggtgtctccctgtccggaggtggagacctacctgaaaatgacccca
gaggagctgcacaccctggaccccaagagcatccagggccaggcccgacgcctgctgtgt
gatgcatacatgtgcatgtaccagagcccgaccatgagcctgtacaagtag
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