KEGG   Anoplopoma fimbria (sablefish): 129103907
Entry
129103907         CDS       T09102                                 
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
  KO
K13088  ELAV-like protein 1
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129103907 (elavl1a)
   03041 Spliceosome [BR:afb03041]
    129103907 (elavl1a)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     129103907 (elavl1a)
   mRNA cycle factors
    Stress granule specific factors
     129103907 (elavl1a)
Spliceosome [BR:afb03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    129103907 (elavl1a)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 RRM_7
Other DBs
NCBI-GeneID: 129103907
NCBI-ProteinID: XP_054470530
LinkDB
Position
15:8506685..8514608
AA seq 347 aa
MAVRRGHIKYLKADLQEVYDMSNGYEDHMGGDEGKDSKTNLIVNYLPQSMTQDELRSLFS
SIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDADRAISTLNGLRLQSKTIKVSYARPSSD
TIKDANLYISGLPKSMTQKDVEDMFSGFGHIINSRVLVDQATGTTGSSRGVAFIRFDKRA
EAEDAVLALNGQIPPGASEPITVKFAANPNQGKNTQIISQLYHNHSRRFGGPVHHQAQRF
RFSPMGVDHMGGVGSVSVPGSSAGWCLFVYNLGQDADESILWQMFGPFGAVTNVKVIRDF
NTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKMLQVSFKTSKGHK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggcagttcgtcgaggacacattaagtacttgaaagccgacctacaggaggtgtacgac
atgtcaaacggttatgaagaccacatgggaggggacgagggcaaggactccaagaccaac
ctgatagtgaactacctgcctcagagcatgacgcaggacgagctgcggagcctcttcagc
agcatcggagaggtggagtccgccaagctgattcgagacaaagtcgcaggccacagttta
gggtacggatttgttaactatcttaaccctagtgatgcagacagagctatcagtacactg
aatggactaaggctacagtccaaaactatcaaggtttcatacgcacggcccagctctgat
accataaaggatgccaacctgtatatcagcggcctgccaaagtctatgacccagaaggat
gtggaggacatgttctcaggtttcggacacatcattaattcccgtgtacttgttgaccag
gccacaggtactacaggctcgtcccgcggggtggcttttatcaggtttgacaagcgggcc
gaggcagaggacgccgtcctagccctgaatggccaaataccacccggagcctctgagcca
atcacagtgaaatttgctgccaacccgaaccaggggaagaacacacagatcatctcccag
ctctaccacaaccactccagacgcttcggagggcccgtacaccaccaggcacagcgcttc
aggttctcccccatgggtgttgatcacatgggtggtgtgggaagtgtcagcgttcctggg
agctccgccggctggtgtctcttcgtctacaacctgggccaggacgccgacgagagcatc
ctttggcagatgttcggcccctttggcgccgtcaccaacgtcaaggtgatccgcgacttc
aacaccaacaagtgcaagggcttcggcttcgttaccatgacgaattacgaggaggctgcc
atggccatcgccagcctgaacggctaccggctcggagacaagatgctgcaagtgtccttc
aagaccagcaagggccacaagtag

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