KEGG   Anoplopoma fimbria (sablefish): 129103999
Entry
129103999         CDS       T09102                                 
Symbol
larp1b
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1B
  KO
K18757  la-related protein 1
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129103999 (larp1b)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129103999 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La Med3
Other DBs
NCBI-GeneID: 129103999
NCBI-ProteinID: XP_054470622
LinkDB
Position
15:complement(4697334..4729692)
AA seq 1045 aa
MSAEVASSPGLTAAEETKKKSEGPPDDRSGHVEEVQEEVVVVQEEEVVQEVVEAPPPKVN
PWTRRTTGRGPSSITPNPGPQEREQQNTLKVVRASKPRTRKSSKSGDFSDITNWPTPGEL
AKEQQQNVLNNNGKKPASGRREKEKRRDRPDRKSESSHDGGESKENQEAQPDPLGELPKD
GESKTGQDAKSAGLKKRGGEGNKRKWVSLPMEDASRDDGDKTPGRGPARSDTEPTGDSPD
PTSPNHTLHNNRAHDSSRSWRRDPRDFGDDTASIRSDSGSVRGGIRGRGKGRGRGRGRGR
GRYEYSHSFRDSQSSDGSVQVSSEFGSNMVYYYDDGSKVQMYSVDEKLLKEYIKRQIEYY
FSLHNLERDFFLRRKMDVGGFLPISLIASFHRVQALTMDVSLIMEALKSSKEVELVDDKI
RCKIDPERWPIPAPAVVGSPRTDFSQLINCPEFVPRQTVSSTNSASSPVKKTPPESTEPQ
DSDEPGSSRQDSLSTKDAPPPAGDVWIQVEKRHRQTAGKERSDASPRSTQAPQPAAHDQE
ELDFLFDEEMEQMAPRKNRFTDWSDEDDSDYELDDQDVNKILIVTQTPPYMRKHPXGDRT
GNHESRAKLTTDIAKAINDGLFYYEQDLWKGEETVECTKQEVENFKKLNVISQDEFETLA
PKVPVDPGQEVPPPLLPVDSGADLARSLPATVPESPIAHEPRTPRTPRTPGRQDPNKTPR
FYPVMKESGTIDGQTPRKKKTRHSSNPPQEAHIGWVMDSREHRPRSSSISSSNASPSEGA
PLTGSYGCTPHSLPKFWHPSHELLRDNGFTQQGYHKYLRRCINERKRLGIGQSQEMNTLF
RFWSFFLRDNFNRKMYEEFKLRALEDAKENYRYGLECLFRYYSYGLEKRFRMDLFKDFQE
ETLKDFERGQLYGLEKFWAFLKYSKMKKQPIDPKLQEHLSQFKNLEDFRVVPPMGEEGGR
RRRHSSSAGDEGRRRRHPSNTTSKPTQASKSSTAAAAGTQSTPKDNAQKTTTTANTAANA
QKTTTTTANAQGKKAEPGAAKKESK
NT seq 3138 nt   +upstreamnt  +downstreamnt
atgtccgcagaggtcgcgagcagtccggggctgacagccgcggaggagacgaagaagaag
agcgaggggcctccagacgaccggagcggccacgtggaggaggtgcaggaggaggtggtg
gtggtgcaggaggaggaggtggtgcaggaggtggtggaggctcctccgcccaaagttaac
ccctggacccggaggacgacgggcagggggccgagcagcatcacccccaaccccggccct
caggagcgagaacaacaaaacactctgaaagtcgtacgtgccagcaagccaagaacgaga
aaatccagcaagtccggtgacttcagtgatatcacaaactggcccacacctggtgagctg
gccaaagagcagcaacaaaatgtcctcaacaacaacgggaagaagccggcgtccgggcgc
cgagagaaggagaagaggagggatcgaccggacaggaagtcggagagcagccacgacggc
ggcgaaagcaaagagaaccaggaggctcaacccgacccgctgggggagctgcccaaagac
ggggagtccaagacgggacaggacgccaagagcgccggcctgaagaagaggggaggagag
ggtaacaaacgtaagtgggtttctctgccgatggaggacgcgtcccgggacgacggtgac
aagacgcccggcagaggtccggcccgctcggacacggagcccaccggcgactcccccgac
cccacgtcgcccaatcacacactccataataacagggcgcatgatagcagcaggagttgg
agaagagatccgcgggacttcggtgatgatactgccagcatccggagtgacagcgggagc
gttcgcggaggaatccgaggtcgaggaaaaggtcgtggtcgcggtagaggtcgtggaaga
ggacgctacgaatactctcatagcttccgggactctcagtcgtctgacggctccgttcaa
gtgtcctcagagttcggctccaacatggtttactactacgacgacggcagcaaggtgcag
atgtactcggtggacgaaaagcttcttaaagaatacatcaaacgccaaattgaatactac
ttcagcctccacaacctggagcgagactttttcctgaggaggaagatggacgttgggggt
ttcctccccatctccctcatcgccagcttccacagagttcaggctctcaccatggacgtc
agcctcatcatggaggccctgaagagcagcaaagaggtggagctggtggacgacaagatc
cgctgtaaaatcgacccggagcgctggcccatcccggctcctgccgtcgtgggttccccc
cggaccgacttctcccagctcatcaactgtcccgagtttgttcctcgacagaccgtcagc
tccacaaactccgcttcatcgcccgtgaagaagactcctcctgagtccactgagcctcag
gactcggatgaacccggttcctcccgtcaggattctctctcaaccaaagacgccccccca
cccgccggcgacgtctggatccaggtggagaaacgccaccgacagactgccgggaaggag
cgcagtgatgcttctcctcgcagcacacaggctcctcagccggccgctcacgaccaggag
gagctggacttcctgttcgacgaagagatggagcagatggcgccgaggaagaacaggttc
accgactggtcggacgaagacgactcggactacgagctggatgaccaggacgtcaacaag
atcctcatcgtcacgcagacgcctccttacatgcgtaagcacccgngaggcgatcgaacc
ggcaaccacgagtcccgcgccaaactcacaaccgacatcgccaaggccatcaacgacggg
ctgttctactacgaacaggatctgtggaagggagaggagacggtcgagtgcaccaagcag
gaagtggagaacttcaagaagctgaacgtcatcagtcaagacgagtttgagactctggcc
cccaaagtgcccgttgacccaggacaggaagtcccgcctcctctactgccagtggacagc
ggagcagacttggcccgctctcttcctgcaacggtcccagagtcgcccatcgctcacgaa
ccccgaaccccccgaacgcctcgcacccccggacgccaggaccccaacaagacgcctcgc
ttctaccccgtcatgaaggagagcggcaccatcgacggacagacgccgaggaagaagaag
acccgccacagttcgaaccctcctcaggaagcccacatcggctgggtgatggactcccgt
gagcaccggccgcgctcctcctccatcagcagctccaacgcctctccgtcagaaggagct
ccgctgacaggaagttacggctgcaccccccactctctgcccaaattctggcatccatcc
cacgagctgctgagggacaacggcttcacccagcagggataccacaagtacctgcgacgg
tgcatcaatgagaggaaacggttgggtatcggtcagtctcaggagatgaacactctgttc
aggttctggtccttcttcctgagggacaacttcaacaggaagatgtacgaggagttcaaa
ctgcgtgcgctggaagacgccaaagaaaactacaggtatggactggaatgtctcttcaga
tactacagttacggtttggagaagaggttcaggatggacctgttcaaggactttcaagag
gagaccctcaaagactttgagagaggtcagctgtacggactggagaagttctgggccttc
ttgaaatactctaagatgaagaaacagcccatcgacccgaagctgcaggaacacctctcc
cagttcaagaacctggaggacttcagggtggtgcccccgatgggagaggagggaggcaga
aggagacgtcattcatcctcggctggggatgaagggaggcgtcggcgacacccttccaac
actacctcaaagccaacgcaggcctccaaatcctccaccgctgctgctgctggcacacag
agtacacccaaagacaacgcccagaaaactacaaccaccgccaacaccgctgccaacgcc
cagaaaacgacaacaaccaccgccaacgcccaggggaagaaggccgagcccggagctgcg
aagaaggaaagtaaatga

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