KEGG   Anoplopoma fimbria (sablefish): 129104149
Entry
129104149         CDS       T09102                                 
Symbol
fn1a
Name
(RefSeq) fibronectin 1a
  KO
K05717  fibronectin 1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04510  Focal adhesion
afb04512  ECM-receptor interaction
afb04518  Integrin signaling
afb04810  Regulation of actin cytoskeleton
afb04820  Cytoskeleton in muscle cells
afb05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:afb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129104149 (fn1a)
   04518 Integrin signaling
    129104149 (fn1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129104149 (fn1a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129104149 (fn1a)
   04810 Regulation of actin cytoskeleton
    129104149 (fn1a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    129104149 (fn1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129104149 (fn1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129104149 (fn1a)
   00536 Glycosaminoglycan binding proteins [BR:afb00536]
    129104149 (fn1a)
   04990 Domain-containing proteins not elsewhere classified [BR:afb04990]
    129104149 (fn1a)
Membrane trafficking [BR:afb04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    129104149 (fn1a)
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   129104149 (fn1a)
Glycosaminoglycan binding proteins [BR:afb00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   129104149 (fn1a)
Domain-containing proteins not elsewhere classified [BR:afb04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type I domain-containing proteins
   129104149 (fn1a)
SSDB
Motif
Pfam: fn3 fn1 FN3_DSCAM-DSCAML_C Fn3_VIN3 Fn3_PBP1 Pur_ac_phosph_N Fn3_Dep-1_2nd fn2 Fn3_Dep-1_3rd Interfer-bind DUF8447 FN3_Tor_3rd Cadherin_tail CopC
Other DBs
NCBI-GeneID: 129104149
NCBI-ProteinID: XP_054470656
LinkDB
Position
16
AA seq 2505 aa
MSRSSIARVLVALCIGSAVNCMPKGTHKSRRQAQQHQVSSVSQDGCLENGQFYGINDQFE
RPYLGSILVCTCYGVAGIKCKSKPEAEETCYDKINQQSYNVGETYERPKEGMIWDCTCIG
SGRGKISCTIGNRCHEGGASYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPVAERCY
DNSAGTSYDVGETWEKPYQGWMVVDCTCMGEGSGRITCTSRNRCNDQDTLTSYRIGDTWT
KTDAQGHPLQCLCTGNGRGEWKCERHASLHTTGLGTGSRVITNIQPAVYQPASVPGLTQE
GPCRTDAGLSYFIGQRWMKNQGNQQMICTCLGNGISCEQWDGPAPVYGGNSGGQPCVFPF
VYKGKTYHSCISDGHSDGQLWCSTSSDYETDQKYSFCTEKNVIVVTRGGNSNGALCQFPY
LYNGRNYTDCTADGRRDGMKWCGTTIDYDGEQRFGFCPMADHEEVCTTSEGAMHRMGDQW
DKRHDVLGHMMRCTCVGNGRGEWSCVAYSQLKDQCIVDGLTFAVNQTFTKQHEEGYTMNC
TCFGQGRGRWKCDAIDQCQEPETRAFYKIGESWDKVIQGIMYKCYCYGNGVGELSCEPQQ
SYPGGNRPVQVLITESANQPNSHPIQWNAPQSAHITQYILKWRVKNTHSPWREVMIPGHL
NSYTISGLKPGITYEGQLISVLRFGRQEVTRFDFTTNYGSLATSQGETTPPPPTVDISES
VTEITSSSFVISWVSASDTISGFRVEYELSEQGHGTGQPLVLDLPHTATSVNINELLPGR
KYTVNVYEVTDGEEDNLILTTSQTTAPDAPVDHEVEEVGETSMVISWEKPLAPITGYRVV
YTPSLEGESTELTLPDTATSVTLSDLRPGKLYNISIYSVEDSLESEPIFVQVNTAGDPLP
EEVPSPTDLQFFEVSDKKIVLTWTGPSGAVSGYRLTAVPVDESGSPQREMTLPMSQNSYI
EVSQLTPGTLYRFHVYTIHNGEESLPLIGEQTTKPDAPTDIHFSNVTEDSAMMFWYAPRA
KITGYRLFLTIEGSNPKQLRLPARFSQYTILNLKPDTEYTATLHAEQENTLSEGESAVFT
TTLPMGNAPHFSTDVTDTSIIISWTPVPHIEYKLTVRPSQGGEAPRDVTSDSGSIYVSGL
TPGVEYTYSVQPVINGHEQGTPITRRVITPLSPPTDLNLESNPGTGDLTVQWNGASTPDI
TGYRVTCTPTNGQQGNSLEEFVEAGQNSCTLENLSPGVEYNVSVVTVKDDMESTPISTII
TPEVPKLTDLTFRDVSDTTISLRWSPLNTTTITGYRITVVAAGESVPIFEDLVLPTTGQY
TVYGLEPGIDYDISVITVTENGESEPTTVTQQTSVPAPTDMGFGQIGPDSMQVTWVAPVV
PNTADLSSFLIRYHPIDDEDDITETSADGKSNNVVLRNLLPNTEYLVSVVCVYEQRESSP
LVGTQKTALDSPVGLRFSEIFTNSFTIHWLAPQSKITGYRIRYQMVSGGRSKDERLPPSR
NHFTLTGLTADTEYLVNIYSVSGAQESLPLSGKQKTISDAPTDLEVLDSSPTSITVRWDA
PPVTVRYYRITHGESGGHSNPKEFTVPGSQSTVTINNLKPGTDYTVTVYAVTGRGDSPAS
STPIYVMHKTGVESPSEMEVMEVNDNSVTVKWSPAQGPIKGYRVTGVPRNGQGQSFTEVV
APDQTEITFSGLMPTVEYVLSVYALGQDGESSPVVVNALTNVDRPKDLTFSDIDSTSLRI
TWDSPEGIVTSYRVLYSSSEEGERELRPAPRGDAESTVIHGLQPGTEYTVKVIAVHDDTA
STPLVGTQATAISPPTNLQFSQVSPTSFTMRWAVPGQENRLNGLTGLTGYRVVVNPKNKS
GPTKEINLAPDTTQAHISGLMIATAYEIHVYALKNSLTSRPVQGEVTTLENISPPRRVRI
SDVNDSSITLTWRSKTETISGFLVEATPTTSSSGYIPIQKTTGPDSRSFVITGLEPGTNY
KINIYTLKGNGRSAPLTLTATTAKPVVMPPNNIRFTSLNPNSIAFTWEPSRSPGVTGYYV
TYDEAGALPREVIPRPHAGQSYAIINGLKPGTEYVIKIVALQNSLRSTPLVGKARTQPAL
DHQLLVPELPQLPVPHRPTTDILDVPESFDDKIFDTNHVHLAGTSGQNQPGQQGQHIYTE
YQNLGPNNGLHGPFSGSREGQRPTLREPLIYIPVAGPDGNRVPLVKVSDGPLPGLAFGFP
DNETDLPQEARTITTISWSGIPHTSEYEVSCNPITHLEERGFQMRLPGTSNSATLIGLTS
GASYNVVVEAMRGGTKEKVLEEVVTVGNAVPGEIPISGNRDVCYDTFTQTYHELGSEWER
MSETGFKLWCRCLGLGSGHFRCDSSKWCHDNNNNYRVGEKWDRQAENGHMMSCTCLGNGK
GEFKCEPHESTCYDDGKMYQVGNQWQKEYLGAICTCTCYGGQQGWRCENCRRPGGPTDVD
ADLLQPVHSDVFDRYRENALRKLNIQCPIECLRPELLADAQQPLE
NT seq 7518 nt   +upstreamnt  +downstreamnt
atgtcccgcagctccatagccagggtgctggttgctctctgcatcgggagcgcagtgaac
tgcatgcccaaaggaacgcacaagagccggcgacaagcgcagcagcatcaggtctcctca
gtctctcaggatggttgtttagagaatggtcagttctatggtattaatgaccagtttgaa
cgaccatatttgggcagcattctggtctgtacctgctatggagtcgctggcatcaagtgt
aaaagcaaacctgaagcagaggaaacgtgctatgataagatcaaccagcagtcctacaat
gtgggagaaacctatgagagacccaaggagggcatgatctgggactgtacctgtatcgga
tcagggaggggcaagatcagctgcaccattggcaaccgctgtcatgagggcggggcttca
tataagattggtgacacctggaggagaccccatgagacaggaggctacatgttggagtgt
gtctgtctgggtaacggcaagggagagtggacctgcaaaccagtcgctgagcgttgctat
gacaactcagcgggaacatcctatgatgttggggagacctgggagaagccgtaccaggga
tggatggtggtggactgcacctgtatgggagagggaagtggacgcatcacctgtacttcc
agaaatcgctgtaacgaccaggacactctgacctcctaccgtatcggagatacctggacc
aagacagacgcccagggccacccactccagtgtctgtgcaccgggaacggccgaggggag
tggaagtgtgagcgacacgcttcacttcataccactggcctgggcactggctctcgtgtg
atcactaacatccagcctgcggtctaccagcccgccagtgttcctggtcttacccaggag
ggtccctgtcggacagatgcaggactttcctactttatcggccagcgctggatgaagaac
cagggaaaccagcagatgatctgtacctgtcttggcaatggaatcagctgtgaacagtgg
gatggaccggctccagtgtacggtggcaactccggaggtcagccctgtgtgtttcccttt
gtctacaaggggaagacctaccactcctgtatctctgatggacacagtgatggacagctc
tggtgttccacctcctctgactatgagacagaccagaaatattctttctgtacagagaag
aatgtaattgtggtaacacgaggcggtaattcgaacggtgctctgtgccagttcccctac
ctctataacggccgaaactacaccgactgtactgcagatggtcgtagagacggcatgaag
tggtgcggcaccacgatcgactatgatggagagcagcgttttggattctgtcctatggct
gaccatgaagaagtgtgtacgaccagtgaaggggcgatgcaccgcatgggagaccagtgg
gacaaacggcacgatgttctgggtcacatgatgcgttgtacttgcgtcggcaatggaaga
ggagaatggagttgtgttgcctactctcagcttaaagaccagtgtattgtggatggtctg
acctttgcggtgaaccagaccttcaccaaacaacatgaggagggctacacaatgaactgc
acctgcttcggacaggggcgtggccgctggaagtgtgatgccattgatcagtgccaggag
ccggagacgagagccttctataagatcggagagtcttgggataaagtcatccaaggaatc
atgtacaagtgctattgctatggcaacggcgtcggagagctgagctgcgagccccagcag
tcctaccccggcggtaatcgtcctgtccaggttctcataactgaatctgcaaaccaaccc
aactcccaccctattcagtggaacgccccacaatctgctcacatcacccagtacatcctc
aagtggagagtgaaaaacactcatagcccatggagagaggtgatgatccctggccatctg
aactcgtacaccatctctggtctgaagccaggcatcacctatgagggtcagctaatcagc
gtgttgcggtttggacgccaagaggtcacccgctttgacttcaccaccaattatggatca
ctggcaacatcacaaggcgagaccactccacctccgcctacggttgacatctctgagtcg
gtgaccgaaattacctccagcagctttgtcatctcctgggtttccgcctccgacacgatt
tctggttttagagtagagtatgagctcagtgagcagggacacggaactggacaacccctg
gtgctagacctgccccatacagctacctcagtgaacattaatgagcttctacctggaagg
aagtacactgttaacgtctatgaggtcacagatggcgaagaggacaacctcattctaact
acttcacaaaccactgcaccagacgctcctgttgaccatgaagtggaggaggtgggagaa
acgtccatggtgatcagctgggaaaaaccactggctcccatcactggctatcgtgtcgtc
tacacgccatcactggaaggtgaaagcacggagctgactctccccgacacggctacatct
gtgactctcagtgaccttcgacctgggaagctgtacaacatcagtatctactctgtggag
gacagcctggagagcgagcctatctttgtacaagtcaacactgctggagatccactgcca
gaagaagtcccctctcccactgacctgcagttcttcgaggtgtcagataaaaaaatcgtt
ctgacctggaccggcccatccggcgccgtgtccggttaccggctcaccgccgtccccgtc
gatgagtctggttctccacagagggagatgactctgcccatgagtcaaaactcctacatt
gaagtgtcacagctcacgcctggaacactgtaccgcttccacgtctacaccattcacaat
ggagaggagagtttaccacttattggggagcaaaccactaagcctgatgctccaacagat
atccatttctccaatgtgactgaggacagtgccatgatgttttggtatgcccctcgtgcc
aaaatcactggctaccgtctcttcctcaccattgagggctctaaccccaagcagctgcgc
ctgcctgcccgcttttctcagtacaccatcctcaacctgaagcctgacaccgagtacacc
gctacgctacatgcagagcaggagaatacactgagtgaaggagagagcgctgtattcacc
actactctgccgatgggcaacgctcctcatttcagcactgatgtgactgacacctccatt
atcatctcctggactccagttccccacattgaatacaagttgacggtgcgtcctagtcag
ggcggagaagcccccagagatgtgacctctgactctggaagtatttacgtttctggtctg
actccgggagtggagtacacctacagcgtccagcctgttataaacggccatgagcaggga
accccaatcacacgccgtgttatcacacctctgtctcctcctactgatctgaacctggag
tctaacccaggcaccggagacctcacagtccaatggaacggagccagtacaccagacatc
actggctacagagtgacatgcacccccaccaatgggcagcaaggaaacagtttggaggag
tttgtggaggctggacagaactcctgcaccctggagaatctcagtccaggagtggaatac
aacgtcagtgttgttactgttaaggatgacatggagagcactcccatatcaactatcatt
acaccagaagtcccaaagctcacagacctcaccttcagggacgtgagcgacaccaccatc
agtctccgctggtcaccgctcaacaccacaaccatcactggttacaggatcacggtggtg
gcagccggcgagagcgtacccatctttgaagacctggttctgccgacgaccggacaatat
actgtctacggactggaacctggtatcgactatgacatcagtgtgatcaccgtgacggag
aacggcgagagcgagcccaccacagtcactcagcagacctctgtaccagcacctactgat
atgggctttggccagattgggccagacagtatgcaagtcacctgggtcgctcccgttgtc
cccaacacagctgacctcagcagcttcctcatcaggtatcatcccattgatgatgaagat
gacattacagaaaccagcgcagacgggaagagtaacaacgtagtgctaagaaacttgctg
cctaacacagagtatctggtgagcgtggtgtgtgtgtatgagcagagagagagctcgccc
ctcgtcggcacccagaaaacagctctggattccccagttggcctgcggttctctgagatc
ttcaccaactcctttaccatccactggctcgctccccagagcaagatcacaggttaccgc
atccgttaccagatggtcagcggcgggaggtccaaggacgagaggctgcccccatccagg
aaccacttcaccctgacaggactcactgctgacacagagtacctggtcaacatctactca
gtgagcggggcccaagagagcctgccgctcagcgggaagcagaagacaatctctgatgct
cccacagacctggaagtcctcgactcctcccccaccagcatcaccgtccgctgggacgcc
ccacctgtcactgtgcgctactacaggatcactcatggagagagtggaggtcacagtaat
cccaaggagttcacagtgcctggctctcagtccactgtcaccatcaataacctgaagcct
ggtaccgactacaccgtcactgtctacgctgtgactggtagaggagacagccccgcctcc
agcaccccaatctatgtcatgcacaagacaggcgttgaatccccctctgaaatggaggtg
atggaggtgaatgacaacagtgtcacagtgaagtggagccctgcccagggcccaatcaag
ggatacagggtgactggggtccccagaaatggacaagggcagtctttcactgaggtggtg
gctccagaccagacagagattactttctcaggactgatgcccacagtagagtacgttttg
agtgtatatgctcttggacaagatggagagagctctccagtggtggtgaatgctttaaca
aatgtagaccgtccaaaggacctgaccttctcagacatcgactccacctcactgcggatc
acctgggacagtcctgagggaatcgtcacctcttaccgggtcttgtattccagttcggag
gagggtgagagagagctgcgccctgctcctcgaggagatgccgagtctactgttatccat
ggtctgcaacccggcactgaatacacagtgaaggtcattgctgtgcatgatgacacagcc
agcacaccactggtcgggacacaagctacagccatctcaccccccaccaacctccagttc
tcccaggttagccctacctctttcaccatgcgctgggctgtgccgggtcaggaaaaccga
ctaaatggcctaacgggcctcacaggctaccgtgtggtggttaacccaaagaacaaaagc
ggacctaccaaggagatcaacttggccccagataccacacaggctcacatctctggcctc
atgattgcaacggcatatgaaatccatgtttatgccttgaaaaactctctgaccagcagg
ccagtccaaggagaggtcaccaccctggagaatatcagcccccctcgtcgcgtacgtatc
tccgacgttaacgactcttccatcaccctgacatggcgctccaagacagaaaccatctct
ggcttcctggttgaggccactcccaccacctcctcttcaggctacataccaatccaaaag
accaccggccctgactcgcgctccttcgttattacaggtctggagccaggcaccaattac
aagatcaacatctatacactgaaaggaaacggacgcagcgcacctctcacactcactgcc
accacagccaaacccgtggtcatgccgcccaacaacatccgctttacctccctgaacccc
aacagcatcgctttcacctgggagccatcacgcagcccaggggttactgggtattatgtc
acctatgatgaggccggggctctgcctcgagaggttatccccagaccccatgcaggccag
agctacgccattatcaatggtctgaagccaggaaccgagtatgtcattaagattgtcgcg
ctgcagaattctttgagaagcacacctctagtgggaaaagccagaacacagccggctctg
gatcatcagctgttggtccccgagctgcctcagcttcctgttcctcaccgacccaccacc
gacatcctggatgttccagagtccttcgatgacaagatttttgacaccaaccatgttcac
ttggctggtactagtggccagaaccaaccaggccagcagggccagcacatctatactgag
taccagaacctaggccctaataacggacttcatggccccttcagtggatccagagaaggc
cagagaccgactctcagagaacctctgatctatattcctgtagcaggccctgatggaaac
agagtacccttggtcaaggtgagcgatggtcccctgccaggtcttgcgtttggtttccct
gacaatgaaacagatttaccccaagaagcacggacaatcacaaccatctcctggtctggc
attcctcacacttcagagtacgaggtgtcctgtaatcctattacacacctggaggaaaga
ggctttcagatgcgtcttcctggcacctccaacagtgccacactgattggattgacatcc
ggagcttcctataacgtcgtagtagaggccatgaggggcgggactaaagagaaggttttg
gaggaagtcgtaaccgttggcaatgctgttccaggtgaaatccccatttccggcaaccgg
gatgtgtgttacgacacattcacacagacgtaccacgagttgggctcagagtgggagcgc
atgtctgagacgggcttcaagctgtggtgccgctgccttgggctcggcagtggccatttt
agatgtgattcatccaagtggtgtcatgacaacaataataactaccgcgtcggcgagaag
tgggatcgccaggctgagaacggtcacatgatgagctgcacctgcctgggcaacggcaag
ggagaattcaaatgtgaaccccatgagtcgacatgttatgacgatgggaaaatgtaccag
gtgggaaaccagtggcagaaggaatacctgggcgccatctgtacgtgtacctgctatgga
ggacaacagggctggcgttgtgagaactgcagaaggcctggaggaccgaccgatgtggac
gctgacctccttcaacctgttcattcagatgtcttcgaccgttacagagaaaacgctcta
cgcaaactgaacatccagtgtccgattgaatgtttgaggccggagctgcttgcagacgct
cagcagcccttggagtag

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