Anoplopoma fimbria (sablefish): 129104159
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Entry
129104159 CDS
T09102
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04145
Phagosome
afb04210
Apoptosis
afb04517
IgSF CAM signaling
afb04530
Tight junction
afb04540
Gap junction
afb04814
Motor proteins
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129104159
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129104159
09143 Cell growth and death
04210 Apoptosis
129104159
09144 Cellular community - eukaryotes
04530 Tight junction
129104159
04540 Gap junction
129104159
09142 Cell motility
04814 Motor proteins
129104159
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129104159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129104159
03036 Chromosome and associated proteins [BR:
afb03036
]
129104159
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129104159
04147 Exosome [BR:
afb04147
]
129104159
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129104159
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
129104159
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
129104159
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129104159
Exosomal proteins of other body fluids (saliva and urine)
129104159
Exosomal proteins of colorectal cancer cells
129104159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
129104159
NCBI-ProteinID:
XP_054470671
LinkDB
All DBs
Position
16:complement(15371534..15375079)
Genome browser
AA seq
523 aa
AA seq
DB search
MKGRITRQTVLGTSLFQKKILLLPPANELCSCFLRFPACPLHILAYINPDSAFPLHFCLV
SESSTSVEGPADKMRECISMHVGQAGTQMGNACWELYCLEHGIQPDGQMPSDKSIGGGDD
SFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGH
YTIGKEIIDLVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKL
EFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNL
NRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLS
VADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRTIQFVDWC
PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW
YVGEGMEEGEFSEAREDMAALEKDYEEVGTDSMGDEDEEGEEY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcggataacacgacagacagtattagggacttccctctttcaaaaaaaaata
ctgctgctccctcccgccaatgagctatgcagctgcttcctgaggtttcctgcctgcccc
ctccacatccttgcctatataaaccctgactctgcctttcctctgcacttctgccttgta
tctgaatcctcaacgtcagtcgaaggaccagcagacaaaatgcgtgagtgtatttccatg
cacgtcggccaagccggaacccagatgggcaatgcatgctgggagctgtactgtctggaa
catgggatccagcctgacggacagatgcccagtgacaagtctattggaggaggagacgac
tccttcaataccttcttcagtgagactggagcaggaaagcacgttcccagagccattttt
gtcgacctggaacctactgtcatcgatgaggtgcgtacaggaatctaccgccagctgttc
caccctgagcagctgattacaggaaaggaagatgcagccaacaactacgcccgtggacac
tacaccatcggcaaggagattattgatctggttctggacaggactcgtaaactggctgat
cagtgcactggcctgcagggattcctgatcttccactcctttggtggaggcactggctca
ggtttcacctccctgctgatggagagactctctgttgattacggaaagaaatcaaaactt
gaatttgccgtctacccggccccccaggtctccaccgcagtggtggaaccttacaactcc
atcctgaccacccacaccaccctggagcactccgactgtgccttcatggtggacaacgag
gccatctacgacatctgccgcaggaacctcgacatcgacaggccgacttacaccaacctg
aacaggctcattggccagatcgtgtcttcaatcacagcctctcttcgctttgacggagcc
ctgaatgttgacctgacagagttccagaccaacttggtgccttaccctcgtatccacttc
cctctggccacatatgccccagtcatctctgcagagaaagcctaccatgagcagctgtct
gttgctgacatcaccaacgcctgctttgagccagccaatcagatggtgaagtgtgatcct
cgtcacggtaaatacatggcctgctgtctgctgtatcgcggtgatgtggtgcccaaagat
gtcaactccgccatcgctgccatcaagaccaaacgcaccatccagtttgtggactggtgc
ccaacaggcttcaaggtgggcatcaactatcagcctccaacggtggttcctggaggagac
ctggccaaggtgcagagggccgtgtgcatgctgagcaacaccacagccatcgctgaggcc
tgggcccgtctcgaccacaagtttgacctcatgtacgccaagagggcctttgtccactgg
tatgttggggagggcatggaggagggagagttctcagaggccagagaagatatggctgcc
ctggagaaggattatgaagaggttggcactgacagcatgggagatgaggatgaagaggga
gaggagtattaa
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