Anoplopoma fimbria (sablefish): 129104184
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Entry
129104184 CDS
T09102
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129104184 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129104184 (hdac4)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129104184 (hdac4)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129104184 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
129104184
NCBI-ProteinID:
XP_054470712
LinkDB
All DBs
Position
16:complement(6049204..6168849)
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AA seq
1123 aa
AA seq
DB search
MSSHSRSGGLTSNEQPVELLKPATLNHFVDVSSAALPMQVPPNTSAILPMDLRVVDHPHH
HHHHHHQQPQFGLGPQPHSTPPVSTACPSEPGRGPVINHPEQQLQQELVTLKHKQQLQRQ
ILIAEFQRQHEQLSRQHEVQLQEHVKSCFSLHQHQQDLLALKHQQELLEHQRKMEQQRLE
QEMEKQQREHKLLQLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRNLNHCLPSDPR
FWYGKTQHSSLDQSSPPQTALSAYTHPMLGTYDSKDDFPLRKTASEPNLKLRSRLKQKVT
ERRSSPLLRRKDGPITSVKKRSLDVAESACNSAPGSGPSSPNNSSSNIPSENGISISSSP
GEASLLHRLAAREGSVSQLSLYTSPSLPNITLGLPATGPASSVVSGHQDGDSRLALPGLQ
QGIPLTPPFLPTAHLPSYLASSALDREGAGGGTAGHNPLLQHMVLLEQGHNPMVGLAGLP
LPSPSVSKLARGHRPLGRTQSAPLPQQQCGQAQALQQLVVQQQHQQFLEKHKQQFQQQQH
IINKIMSKPSDQVSAANSSASGPARQHQSHPEETEEELREHQGLSLSSSLSSSTSAQETG
PLRGLVIKQEPPDPQEQQQEEREMRDRQVEQEFLFRQQALMLEQQRIHQLRNYQASMEAS
GLPVSFAGHRPLSRAQSSPASASFPMVVQEPPAKPRFTTGLVYDSLMQKHQCMCGNTTSH
PEHAGRIQSIWSRLQETGLRAHCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLDCS
VSPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPG
HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKVLIVDWDVHHGNGTQQAFYADPSILYLS
LHRYDDGNFFPGSGAPDEVGSGAGEGFTVNMAFTGGLEPPMGDADYLAAFRTVVMPIANE
FAPDVVLVSSGFDAVDGHAPPLGGYKLTAKCFGYLTRQLMGLAGGRLVLALEGGHDLTAI
CDASEACVSALLGNELDPIPDEVLQQRPNANAVHSMEKVLEIQGKYWRSLQRSASTLGCS
LSEALQREAEEAETVSAMASLSVANKHVGKRAEEEPMEEEATM
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcacagtcgctcaggtggcttgaccagcaacgagcagcccgtggaacttctc
aaaccagccacactcaaccatttcgttgacgtgagctcggcagcactgcccatgcaggtg
ccccccaacacctcagccatccttccaatggacctgcgcgtagtcgaccacccccaccac
caccaccaccaccaccaccagcagccccaattcggcctgggtccccaaccccacagtacc
ccgcccgtctccacagcctgcccctccgaaccgggccgcgggccagtcattaaccacccg
gagcagcagctgcagcaggagctggtgactctcaaacacaagcagcagctccagaggcag
atcttgatcgccgagttccagaggcagcacgagcagctgtcgcgacaacacgaagtccag
ctgcaggagcatgtcaagtcttgtttctctctccaccagcaccaacaggatctactggct
ctcaagcaccaacaggagctgttggagcaccagaggaagatggagcagcagcgtctggag
caggagatggagaagcagcagcgggaacacaaactcctccagctcaaaaacaaggagagg
ggacaggagagtgccgtcgccagcacagaggttaagatgcggcttcaggagtttgtcctg
aacaagaagaaagcgctggctcagcgaaaccttaaccactgtctgcccagcgacccgcgc
ttttggtatggaaaaacccagcacagctctttggaccagagctctcctccccagacagca
ttgtcagcgtacacccacccgatgctgggcacatacgactccaaggacgacttccctctc
cgaaaaacagcctcggagcccaacctgaagcttcgctcccggctaaagcagaaggtgaca
gagcgccgcagcagccctcttctccgaaggaaagatggccccatcacttccgtcaagaag
cgttccctagacgtggctgagtcagcatgcaacagcgcacctggctcaggtcccagctcc
cccaacaacagctccagtaacatccccagtgagaacgggatctccatctccagcagccca
ggagaggcctcgctgcttcataggttggctgctagggagggttcggtcagccagctgtct
ctctacacctccccttctctgcccaacatcaccctgggactgccagccacagggccggcc
agctctgtggtgtcaggacaccaagatggtgatagtcgtctggcgttgcccgggctacag
caggggattcctctgacccctccgttcctgcccacggcccacctgccctcctacttggcg
tcctcggctctggacagggagggggccggagggggcacggccggtcacaacccccttctc
caacacatggtgcttttggagcagggccacaacccaatggttggtcttgctggcctgccg
ctgccctcaccctctgtctccaaacttgctcgtggccaccgtccccttgggcgaacccag
tcagcccctctgccccagcagcaatgtggacaggcccaggccctgcagcagctggtggtc
cagcagcaacaccagcagttcctggagaaacacaaacaacagttccagcagcagcagcac
atcatcaacaagatcatgtccaagcccagtgatcaggtctcagctgcgaactccagcgcc
tcagggccggccaggcagcaccagagtcacccagaggagacggaggaggagctgagggag
caccaggggctctccctttcatcctcgttatcctcttccacatccgcgcaggagacgggg
cctctgcgagggctggtcataaaacaggagcccccagacccccaagagcagcagcaggag
gagagagagatgagggacagacaagtcgagcaggaattcctgttccgacagcaggctctg
atgttagagcagcagcggatccaccaactgaggaactaccaggcctccatggaagcatcc
gggttgccagtcagcttcgccggacaccgtcccctctccagggctcagtcgtccccagcc
tccgcctccttccccatggtggttcaggagccgcccgccaagcctcgatttacaacaggt
ctggtgtatgactccttgatgcagaagcaccagtgtatgtgcggcaacaccaccagccat
ccagagcacgctggtcgcatccagagtatctggtcccgactacaggaaacaggcctcagg
gctcactgcgagtgtatccgcggtaggaaagcctcgctggaggagttacagacggtccac
tccgaagcccacgtcctgctgtacggaaccaacccgctgcggcagaaactggactgttca
gtgagtcccatgtttgtgaggttaccatgcggaggaataggggtggacagcgacaccatt
tggaacgaggtccattcatccagtgcggctcgtctggccgtgggttccgtggtggagctg
gtcttcaaagtagcgtcgggagaattgaagaacggttttgctgtagttcgaccacctgga
caccacgctgaggagagcacgcctatgggcttctgttacttcaactcagttgccatagca
gccaagctgctgcagcagagactcaatgtcagcaaagtcctcatcgtggactgggatgtt
caccatggcaacggcacccagcaggccttctacgcagaccccagcattctctacctgtcg
ctgcatcgctatgacgatgggaacttcttccccggcagtggagcacctgacgaggtgggc
agtggagcaggtgagggcttcactgtgaacatggcctttactggaggactggagcctccc
atgggtgatgcagattatctggctgcatttaggacggtggttatgcctattgccaacgag
ttcgccccagacgtggttctggtatcgtcaggctttgatgcggtagacggacatgctcca
cccctgggaggatacaagctgacagccaaatgcttcggctacctgaccaggcagctgatg
ggtctggcaggcggtcggttggtgctagccctggagggaggtcacgacctcacggccata
tgtgatgcctctgaagcctgcgtctccgctctgcttggcaatgagttggaccccattcct
gacgaggtgctgcaacagagaccgaacgccaacgctgtccactctatggagaaagttctt
gaaatacagggtaagtactggcggtcactgcagcgctccgcctccacactcggttgctcg
ttgagcgaagcccttcagcgtgaggcagaggaggctgagaccgtctccgccatggcctca
ttgtccgtcgccaacaagcacgttggaaagagggctgaagaggaacccatggaagaagaa
gctaccatgtaa
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integrated database retrieval system
