Anoplopoma fimbria (sablefish): 129104211
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Entry
129104211 CDS
T09102
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129104211 (tbc1d4)
Membrane trafficking [BR:
afb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129104211 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129104211 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
129104211 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
PTB
Cnn_1N
DUF4249
DUF3450
Motif
Other DBs
NCBI-GeneID:
129104211
NCBI-ProteinID:
XP_054470760
LinkDB
All DBs
Position
16:complement(2209519..2237669)
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AA seq
1254 aa
AA seq
DB search
MQSPDERETSPPRSDRRFALTYVGWSSLDRRTTLPMLPWLVAEIRRKSERGDLGPAVQPR
DVQLVLNPPFVRCVPSSSSSSSVFIFEHKAQLVSRFIHNSNDLSYFAYLTRGQPDNPESE
MTCHVFKACDPNQVPEVISSIRQVSKSALKEDTKPKQEADEAFYNSQKFEVLYCGKVTVQ
HKKAPVTLIDDCIDKFRLHEVERKRLRLLSGQRGSTESAPVEFLIGGEGDPLSTALNESI
EYTEGVEDMTGVKGLSNSGSQSSLRGTFPECILEDSGFEEPQEFRTRCSSLAGSLQRKPG
EGVLIGPARRRHSSAPNHVQPSDSDKNRTMLFQVGRFEVNLISPDSKTVVLEKNFKDISS
CCQGVKQSDHFGFICRDQSEAGPSQYVCYVFQCASESLVDEVMMTLKQAFTTAAALQSNK
TQIQLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSKLTDNEQAEIFERVQRLKPGSD
QEENELVVLHLRQLCGTKQKSHLHIGDPLQNAANSSSAGDGTATSSRFKLDILKNKARTS
LTSSLENIFARGASRMRGRLGSMGSISSFERQDEESPGHSPPGSPPFPDDDGGDPEGGLQ
FRRRAHTFSHPPVKKRISFEGQPGGQSKQAPLRRQQSVNPDLLQSSPVAISRTRSVSESE
STFGLPSSFSAPTFLKSIYQGSLGSLSSLADSGSLKSNGEGRKRTLSTCSGDSVSGGLPP
TPRRVSWRQKIFLRVASPMNKPAASMQHPDHSDGRELLPLSPRGGGSGFDPLGRLLHPTG
DPLSGERPKRTGADHRALWKTAIHQQILLLRMEKENQRLEASRDELHIRKMKLNYEEVGQ
CSKEAQALWERKLTAPGRTTVPQDKEEMYHALRQGVPKSRRGEVWQLLSHQHRLCHRMPQ
RQQAPDTPYQDLLKQLTAQQHSILVDLGRTFPTHQYFSAQLGAGQLSLYNLLKAYSLLDT
EVGYCQGISFLAGVLLLHMSEEQAFDMLKFLMYDLGIRQQFRPDMVSLQVQMYQLSRLLH
DYHRDLYNHLEEHEISPSLYAAPWFLTLFASQFPLNFVSRVFDFVFVEGTGVIFKVALCL
LGSHEGEIVECDSFESIVDYLKTTIPALTQTQMEQTIAKVMEMDISKQLHAYEVEYHVLQ
DEMLEAGPLPDDSDRLDKLEKANVQLKKQNMDLLEKLQAARQKIQTLETSVENFLSRESK
MKHMIRSLEQERVAHQKTIERMRSCLPPDALTDVEMTQIKTGPNVKAKTVAKKP
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtccggacgagagggagaccagtccccccaggtcggacaggaggttcgccctg
acttacgtgggctggtcgtcgctcgacaggcggaccacgctgcccatgctgccgtggctg
gtggcggagatccgcaggaagagcgagagaggcgacctcggcccggcggtgcagccgagg
gacgtccagctggtcctcaaccccccgttcgtccggtgcgtgccctccagcagcagcagc
tcgtccgtgtttatattcgagcacaaggcgcagctcgtctcgcgtttcatccacaacagc
aacgacctctcctacttcgcctatctgacgaggggccagcccgacaacccggagtccgag
atgacctgtcacgtcttcaaggcctgcgaccccaaccaggtccctgaggtgatcagcagc
attcgccaagtgtccaaatcagccttaaaggaagacaccaagcccaaacaggaagccgac
gaggccttctacaactcccagaagtttgaagtgctttactgtggcaaggtgacagttcag
cacaaaaaggctccagtcaccctgatcgacgactgcatcgacaagtttcgtctgcatgag
gtggagcgcaagcgcttgcgactgctcagtggccagcgagggtccacagagagtgcccca
gtggagttcctcatcgggggagagggagaccccctctccactgctctgaatgagagtata
gagtacacagaaggagtggaggacatgacaggagttaaaggcctgtctaacagtggcagt
cagagcagcctgcgaggaacgttccccgagtgcatcctggaggactctgggtttgaggag
ccccaggagttccgtacgcgctgcagcagtctggccgggagcctgcagaggaagcctggg
gaaggcgttctcattggccctgcacgccgcagacactcgagcgcaccgaaccacgttcag
ccttctgactcggacaagaaccgcaccatgctcttccaggtcgggcgttttgaagttaat
ctcataagtccggacagtaaaacggtggtgctggagaagaacttcaaagatatctcatcc
tgctgtcagggtgtcaagcagtccgaccattttggattcatctgccgcgatcaatccgag
gccggtcccagtcagtacgtgtgctacgttttccagtgtgccagcgagtccctggtggat
gaggtgatgatgaccctgaagcaggccttcacgacagcagcggccttacagagcaacaag
acccagatccagctgtgcgaagcctgccccatgcacgacctgcacaagctctgcgagcgg
attgaaggtctctacccacccagagcaaagctagccatccaaaaatatctctccaagctg
actgacaacgagcaggctgagatttttgagagagttcagagactgaagcccgggtcggac
caagaggagaacgagctggtggttctccatctgaggcagctctgtggaaccaaacagaag
tcccatcttcacatcggagatcccctgcagaatgcagccaacagctcgtcggcaggagac
ggcacggccaccagcagtcgcttcaaactcgacatcctcaagaataaagctcgcacctcg
ctcaccagctccctggagaacatctttgcaaggggtgccagtcggatgcggggccgtttg
ggaagcatgggaagcatcagcagttttgaaaggcaggatgaggaatcccccggtcactcc
cctccgggctcccctcctttccctgacgacgacggcggcgacccggaaggcggcctgcag
ttccgccggcgtgcccacaccttcagccatccacccgtgaagaaacgcatctcctttgag
ggccagccgggcggccagagcaaacaggctccgctgcgcagacagcagtctgtcaacccc
gacctgctgcagagcagtcccgttgccatctcgagaacgcgcagcgtctcggagagcgag
tccaccttcggcctcccctcctccttctccgcccccactttcctgaaaagcatttaccag
ggctcactgggctccctgagctccctggcagacagtgggagcctcaagagcaatggggaa
ggcaggaagaggaccctgtccacctgcagcggcgactcggtaagcgggggcctccctccg
accccacgcagggtgtcctggagacagaagatcttcctgagggtcgcctcgcccatgaac
aagccggccgcctcgatgcagcacccagaccactctgacggcagggagctgttacctctc
tctccccgcggcggaggctcaggttttgatcctctggggcgtctgctgcacccgacaggc
gaccccctgtccggggagaggcctaagaggaccggggcagaccaccgggccctatggaag
actgccatccaccagcagatcctgctgctgcgcatggaaaaggagaaccagagactggag
gcgagcagggatgagctgcacatccgcaagatgaagctgaactacgaggaagtgggccag
tgctccaaggaagctcaggcattgtgggagagaaaactgacggccccgggcagaacgaca
gtcccgcaggataaggaggagatgtatcacgctctccgccaaggtgttcctaagagcagg
cgcggggaggtctggcagctcctttcccatcagcaccggctgtgtcacaggatgccccag
cgccagcaagccccagacaccccctaccaagacctgctgaagcagctcaccgcgcagcag
cactctattctggtggatctaggccggacctttcccacccaccagtacttctcagcccag
ctgggcgcagggcagctctcactctacaacctcctgaaagcctattctctgctggataca
gaggtcggctactgccagggcatcagcttcttggccggagtgctgctgctgcacatgagc
gaggaacaggcctttgacatgctgaagttcctcatgtacgacctcggcatcaggcagcag
ttcagacccgacatggtctctctgcaggttcagatgtaccagctctccagactgttgcac
gactaccaccgcgacctgtacaatcacttggaggagcacgagatcagcccgagcctctac
gcggcgccgtggttcctcacgctcttcgcctcacagttcccgctcaacttcgtgtcccgc
gtctttgattttgtatttgtggaagggaccggggtgatcttcaaagtggctctctgtctg
ctgggcagccatgagggggagatagtggagtgtgacagcttcgagagcatcgtggactat
ctgaaaactacaattcccgccctcactcagacccagatggagcagaccattgccaaggta
atggaaatggacatttccaagcagctgcacgcgtacgaggtggagtaccacgtcctgcag
gatgagatgttggaagccgggccgctgcccgatgactccgaccggctcgataaactagaa
aaggccaatgtgcagctgaagaagcagaacatggacctgctggagaaactacaggctgcg
cggcagaagatccagacgctggagacgagcgtggagaacttcctgtctcgggagagcaaa
atgaagcacatgattcgctctctggagcaggagagggtagctcaccagaagaccatcgaa
cgcatgcgctcgtgccttccccccgacgccctgacagatgtggagatgacccagatcaaa
acgggacccaacgtgaaagccaaaaccgtagccaagaaaccctga
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integrated database retrieval system
