Anoplopoma fimbria (sablefish): 129104287 Help Entry 129104287         CDS       T09102                                  Name (RefSeq) clathrin heavy chain 1-like   KO K04646   clathrin heavy chain Organism afb  Anoplopoma fimbria (sablefish) Pathway afb04142   Lysosome afb04144   Endocytosis afb05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:afb00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     129104287    04142 Lysosome     129104287  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     129104287  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:afb04131]     129104287   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:afb04147]     129104287 Membrane trafficking [BR:afb04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     129104287 Exosome [BR:afb04147]  Exosomal proteins   Proteins found in most exosomes    129104287 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_PEP5_VPS11 TPR_COPA_B TPR_Vps41 Motif Other DBs NCBI-GeneID:  129104287 NCBI-ProteinID:  XP_054471271 LinkDB All DBs Position 1:8112111..8137732 Genome browser AA seq 1677 aa AA seqDB search MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLVHAPQVADAIL GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKNPELWASVL LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ VGDRCYDDKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN HPSDAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIVEEDYAALRASIDAYDNFDNISLAQGLE KHDLIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLNE DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLEASESLR KQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTAAPGYVQPPQPSFGYGM NT seq 5034 nt NT seq  +upstreamnt  +downstreamnt atggctcagatcctgcccatccgcttccaggagcacctgcagctccagaacctgggaatc aacccagccaacattggattcagcactctaaccatggagtccgacaagttcatctgtata agagagaaagtgggggagcaggcccaggttgtcatcatcgatatggccgaccccaacaac cctatccgcaggcctatctctgcagacagcgccatcatgaaccctgccagcaaagttatt gcccttaaagcggcaaagaccctgcagatcttcaacatcgagatgaagagcaagatgaag gctcacacaatgacagatgacgtgaccttctggaagtggatctccctcaacaccgttgcc ttggtcacagacaatgcagtctaccactggagcatggagggtgattctcagccaatcaaa gtcttcgaccgtcactccagcctggcaggctgccagatcataaactaccgcaccgacgcc aaacagaagtggctgctgctcattggcatttcagcacagcaaaaccgtgtcgttggagcc atgcagctgtactcggtggacaggaaggtgtctcagcccattgagggacacgcagctggc tttgcacaattcaagatggagggcaacactgaagagtcaaccctgttctgctttgctgtg cgaggacaggcaggaggaaagctgcatataattgaagtggggactccgcccactgggaac cagccatttccaaagaaagctgtggacgttttctttcctccagaagcccaaaatgacttc cctgttgctatgcagatcagttccaagcaagatgtagtctttctcatcaccaaatatggc tacatccacctgtacgacctggagactggaacttgtatctacatgaacaggatcagcggc gagaccatttttgtcactgccccccatgagcccactgcgggtatcattggagtcaacagg aaaggacaggtgttgtccgtgtgcgtggaggaggaaaacatcattccctacatcaccaat gtgctccagaacccagacctggccctccgcatggctgtccgcaacaaccttgccggtgct gaggagctgtttgcccgcaagttcaacaccctctttgcagcgggaaactattcagaggct gcgaaggtggcggccaatgcacccaaggggatcctgcggactccagacaccatccgtcgg ttccagagtgttccagcccaaccaggccagacatctcccttgctccaatactttggcatc ttgctggaccaaggccaacttaataagtttgagtccctggagctgtgcaggcctgtcctc caacagggccgcaagcagctcctagagaaatggctgaaggaggacaagctggagtgctct gaggagctcggagacttggtgaagtctgtagatccgactcttgccctcagtgtctacctc agagccaacgtccccaataaggtcatccagtgctttgcagagactggacagttccagaag attgtcctctacgccaagaaggtgggctacactccagactggatctttctgcttaggaac gtaatgcggatcagtccagaacagggccttcagttctcccagatgctggttcaggatgaa gagccacttgcggacattacacagattgttgacgtgttcatggagtacaacctgattcag cagtgcacatccttcctcctagacgccctgaagaataacagacccacggagggaccgctg cagacacgcctgctggaaatgaatctggtgcacgcaccacaggttgcagacgccatcctg ggcaatcagatgttcacccactatgatcgtgctcatgtggcacagttgtgtgaaaaggcc ggtctcctgcagagggcgctggagcattataccgacctgtatgatattaaacgcgctgtg gtgcacacacacctcctcaacccagagtggttggtgaacttctttggctccttgtcagtg gaggactctctggagtgtctgagagccatgctgtctgctaacatccgccagaacctgcag atctgtgtccaggtggcctccaagtaccatgaacagctctctactcagtccctcactgaa ctttttgagtcattcaagagctttgagggtttgttctatttcttgggttctattgtgaac ttcagccaggatccagaggtccacttcaaatacatccaggccgcctgcaagacaggccag atcaaagaggtggagaggatctgtcgagaaagtaactgctacgaccctgaacgtgtgaag aacttcctcaaggaagcaaagctgactgaccagctgcctctgatcattgtgtgtgaccgc ttcgatttcgtccacgatctggtcctgtacctgtaccgcaacagcctgcagaaatacatc gagatctacgtgcagaaggtgaacccaagccgtctgccggtagtcattggagggttactg gatgtggattgtgctgaggatgtgattaagaacctgatcctggtggttagagggcagttc tccactgatgaactggtggctgaagtggagaaaagaaatcgactgaagctgctgctgcct tggttagaggctcgtattcatgaaggatgtgaggagcctgctacccacaatgccctggcc aagatctacatcgacagcaacaacaacccagagcgtttcctgagggagaacccctactat gacagccgtgtggtgggcaagtactgcgagaagagagacccccacctggcctgcgtcgcc tacgaaagaggacagtgtgaccaggaactgattaatgtgtgcaatgagaactcgctgttc aagagtctgtcccgctacctggtacgtcgcaagaaccctgagctgtgggcgagcgtgctg ctggagaccaacaactacagaagaccactcatcgaccaggttgtccagacagccttgtcc gagacccaggatccagaggaggtgtctgtcacggtcaaggccttcatgactgctgacctt cccaatgagctcatcgagcttctggagaagatcgtcctggataactccgtctttagcgag cacagaaacctccagaatctgctcatcctgactgccattaaagctgatcggacacgtgtt atggagtacatcaaccgtctggacaactacgatgccccagacattgcaaacatcgccatc agcaatgagctgttcgaggaggcctttgctatttttagaaaatttgatgtcaacacctct gctgtgcaggttctgattgagcacatcggtaacctggacagagcttatgagtttgccgag cgctgcaatgagccaccagtgtggagtcagctggcaaaggcccagcttcagaagggcctg gtcaaggaagccattgactcttacatcaaggctgacgacccctctgcttacatggaggtg ggacaagctgcagcccaaagtggtaattgggaggacctggtgaagtttctgcagatggcc cgtaagaaggcccgtgagtcatacgttgaaacagagctgatctttgccctggccaagacc aaccgcctggctgagctggaagagttcatcaatggacccaataatgcccacattcagcaa gtgggtgatcgttgctacgacgacaagatgtacgacgcagccaaactgctttacaacaac gtgtccaacttcggtcgtctggcctccactctggtgcacctgggagagtatcaagctgct gtggacggagctcgcaaggccaacagcacccgcacctggaaagaggtgtgctttgcgtgt gtagatgggaaagagttccgtcttgcccaaatgtgtgggctgcacattgtcgtccacgcc gatgaactggaggaactcatcaactactaccaggaccgcggttactttgaggagctgatc accatgctggaggccgccctgggactggagcgtgctcacatgggtatgttcactgagctg gccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttctgg tcccgtgtcaacattccaaaggttctcagggcagcagagcaggcccacctctggggggag ctggtgttcctctacgacaagtacgaggagtacgacaacgccatcatcaccatgatgaac cacccatctgatgcctggaaggagggccagttcaaagacattgtcaccaaggtggccaat gtggagctgtactacaaggccgtccagttttatctggagttcaaaccattgttactgaac gacctgctcatcgttctttctccaagacttgaccactcacgcgcagtcaacttcttcagc aaggttaaacagctgcctctggttaaaccttacctaaggtctgtccagaatcacaacaac aagtcagtaaatgaggcactgaacaacctcttcatcgttgaggaagattatgcggcactg cgtgcttccatcgacgcctatgacaactttgacaacatctcactggcccagggcctggag aagcatgacttgattgagtttaggaggattgcagcttaccttttcaagggaaacaaccgc tggaaacagagtgtcgagctctgcaagaaggacaagctatacaaggatgccatgcagtac gcatccgagtccaaagacatcgagctggctgaggagcttctggcttggttcctgaatgag gacaagaaggagtgttttgcggcctgcctgttcacctgctacgacctgctgcggcccgac gtggtgctagagaccgcctggcgacacaacatcatggacttctccatgccgtacttcatc caggtcatgagggagtatctctctaaggtggacaaactcgaagcctccgagtccctgagg aaacaggaggagcaggctaccgagtctcaaccgattgtttacggaacaccccagctaatg ctcacagcagggcccaacgtggccgtgcctcctcagcagccctacggctacggctacaca gcagcaccgggctacgtccagcccccacagcccagcttcggttacggcatgtga

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