KEGG   Anoplopoma fimbria (sablefish): 129104294
Entry
129104294         CDS       T09102                                 
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a
  KO
K04683  transcription factor Dp-1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03083  Polycomb repressive complex
afb04110  Cell cycle
afb04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    129104294 (tfdp1a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    129104294 (tfdp1a)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    129104294 (tfdp1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afb03000]
    129104294 (tfdp1a)
   03036 Chromosome and associated proteins [BR:afb03036]
    129104294 (tfdp1a)
Transcription factors [BR:afb03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix cell cycle-controlling factors, DP
    129104294 (tfdp1a)
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     129104294 (tfdp1a)
SSDB
Motif
Pfam: DP E2F_TDP
Other DBs
NCBI-GeneID: 129104294
NCBI-ProteinID: XP_054470878
LinkDB
Position
16:complement(9784374..9794847)
AA seq 413 aa
MAKDAGLIETNGELKVFIDQNLSPSKGVLSLVTVQPTAAPVAKQLLPKTLGPSNVNIAAH
MQHIPHMVIGTPQRPTVSSTILVNSPHTPSSQFLTQTQPSDASPWSSGKRGKKGEKNGKG
LRHFSMKVCEKVQKKGVTTYNEVADELVAEFSSADSHMSPNDAHVYDQKNIRRRVYDALN
VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFK
NLVQRNRQTEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIH
DDIEVLKRMGMACGLEVGKCSPEDLKVARSLVPKALEPYVIEMAKGPISNVYITGGSSAN
GTRYPASSDGCTDGTMASSSNDSHYSGSRVETPVSYMGDDDDEDEYDENDDED
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggctaaagatgctggtctgatagaaacaaacggagagctgaaggttttcatcgatcag
aatctgagccctagcaaaggtgtcctatctttggttactgtccagcctacagctgccccc
gtggccaaacagctactacccaaaactctcgggccatccaatgtgaacattgctgcacac
atgcaacatataccacacatggtgataggaacaccccagaggcctacggtatccagtacc
attttggtaaacagtccacatacaccaagttcccagttcctcactcagactcaaccatca
gacgcctctccgtggtcatcaggaaaacgtgggaagaaaggggaaaagaacgggaaaggg
ttgaggcatttctctatgaaagtgtgtgagaaagtgcagaagaaaggagtaaccacctac
aatgaagtggcagatgaactggttgcagaattcagctctgcagacagccacatgtcaccc
aatgacgcacatgtgtatgaccagaagaacattcggcggcgtgtgtacgatgcacttaat
gtgcttatggccatgaacattatctctaaagaaaagaaggaaatcaaatggattggcctt
cccaccaactcagcgcaagagtgccaaaacctagaggtggagagacaaaggcggctggag
agaattaagcagaaacaatcacagcttcaggagctcatactgcagcaaatagcttttaag
aacctggttcagcggaacagacagacagagcagcaggcaaacagacctccacctcccaac
tccattatccacctccccttcattattgtcaacaccagcaagaaaactgtcatcgactgc
agcatctccaacgacaagttcgagtatttgttcaattttgacagcatgttcgagatccat
gatgacatcgaggtgctgaaacgtatgggcatggcctgtggtttggaggtgggaaagtgt
tctccagaggatctgaaggttgcacgtagcctggtgcccaaagctctggagccctacgtc
atagagatggcaaagggtcccatcagtaacgtctacatcactggagggtcctcagcaaat
ggaacccgttaccctgcaagcagtgatggctgcacggacggcaccatggcctccagctcg
aatgactctcactacagcgggtctcgtgtggagactccagtgtcttatatgggggatgac
gatgacgaggacgagtatgatgagaacgatgacgaagactaa

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