Anoplopoma fimbria (sablefish): 129104348
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Entry
129104348 CDS
T09102
Symbol
fhod1
Name
(RefSeq) LOW QUALITY PROTEIN: FH1/FH2 domain-containing protein 1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129104348 (fhod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129104348 (fhod1)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
129104348 (fhod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
RepA1_leader
Motif
Other DBs
NCBI-GeneID:
129104348
NCBI-ProteinID:
XP_054470968
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All DBs
Position
2:404961..448749
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AA seq
1380 aa
AA seq
DB search
MASVVCRVQFLEDSDPFICTNFPEPRRPPTVRVEQNLPLSEQISGIHKLLEAPLKLEDCT
LQLSSHGNYLDLDSSLEEQRDELEGFYEDVTKGKKPILILRTQLSVRVHSILEKLYNSQG
PELRRSLFSLKQLFQDDKDLVPEFVASEGLTCFIKVGAEADHNYQNYILRALSQIMLFVD
GMNGVINHNETVQWLYTLTGSLSRLVVKTSLKLLIVFVEYSESNSPRLINAVNTVDGERG
VKSWSYLMEVLEERNGSDTELLMFTMTLINKTLAVLPDQDSFYDVTDSLEQLGMENVIHK
HMSNKGTEPDLRAQFTTYEAALRYEDGDVEDSSLHLRKERRKTAAGEQEGRKSRRVSSQN
LPDLLSSSAGSSPSASPTPPTFLSPSTANNPLSPTISSASSSSPTGGLGSRASSPLSSDP
SSPTSSPSGSQRGSPLPHHTPPNGTVTAEVESKSPTSASRSFLSHHMSSLGLSRRSRLFS
KTSSISEEPSASCSSSSSASHQENSSQLNQEQLGNKTETKTSLNSDDCSVNPDKPVLRKF
QDTFLRSLAATQWEKKRRSKNLSQSKLSSFDDTINPSLKPAEEGGSVPSEEWPRRSSTSS
SLDSNRHSDSQNDPASEFDRQSSTLTAAAPNTNKEEGHFLPGGDVGGRGRVLERLSSFTA
RSVEPSSPSESRASRRAELEGLEGSAQAALARLAEEQQTRQLRPQSSVDVEGPARRLETT
PMTPLGPGGPPDAWDQLQLSAAALRIKDLDFSDLLDEEDIDVLDMDTFDSSSSSSCFSGV
PPPPPLPSLGPGVPPPPPLPPGVPPPPPLPPGVPPPPPLPPGAPPPPPLPPGAPPPPXFL
PVPSRKKKTVKLFWRELKQADGPARCRFGRGTVWASLDKVSVDTTRLEHLFESKAKELTV
AKKGPETKRSEIQVLDPKRSNSINIGMTVLPAVHVIKAAILNFDEFAISKEGIEKILTMT
PTEEEKQKIQDAQLANPEVPLGTAEQFLLSLASISALTARLQLWAFKLNYEALEKEIAEP
LFDLKLGMEQLSSNQTFRRILATLLAIGNFLNSSNAKGFELGYLEKVVEVKDTVHRQTLL
HHTCSLLLENYPESSDIYSEIPAITRSAKVDFELLSENLVQLERRCKASWDNLKVVTKHE
MKAVLKNKLTDFLKDCTQRIIILKVVHRRVTNRFHSFLLFLGQPSSSVRDIRVTCFCRII
SEFSLEYRTTRERVLTLKQKRAAHRERTKTRGKMITETEKFSGAVPEDDGSSPVSMAAEA
EPGQEEHQNMKNLLNSSDSLTVDQRGLRRSRAVRSLGRVSPSQMSGAKEDGTVSQDDATD
EIMDRLVKSVTQNPSDRPSSPKTRKRSRLNRKSLRRTLKSGLSLDVVQALGLNSQSADRV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtcgtgtgccgggtccagttcctggaggactcggatccgttcatctgcact
aacttcccggagccccgcagacctccgacggtccgcgtggagcagaacctgccgctcagc
gagcagatctccgggatccacaagctgctggaggcgcctctgaagttggaggactgcacc
cttcagttgtcttctcatggaaactatctggacctggactcgtctctggaggagcagagg
gacgagctggagggcttctatgaagacgtaacgaaggggaagaagcccatcctgatcctg
aggactcagctctctgttcgggttcactccatcctggagaagctgtataactctcagggt
ccagaactccgacggtccctgttctccctcaaacagctgttccaggatgataaagacctg
gttccagagttcgtggcctctgaaggcttgacctgcttcattaaagtcggagcggaggcc
gaccacaactaccagaactacatcctgagagctctcagtcagatcatgctgttcgtagac
ggtatgaacggagtgataaaccacaatgagacggtccagtggctctacactctgacagga
agtctgtctcgtctggtggtgaagacgtctctgaagctgctcatcgtgttcgtagaatat
tccgagtccaacagtcctcgactcatcaacgccgtcaacacggtggacggagagagaggt
gtgaagtcgtggagttatttgatggaggtgctggaggagagaaacggctccgacacagag
ctcctcatgttcaccatgacgctcatcaacaagactctagcggttcttcctgatcaggac
tcgttctacgatgtgaccgacagtctggaacagttggggatggagaacgtcatccacaaa
cacatgagcaacaaggggaccgagccagacctccgggctcagttcaccacctacgaagct
gctctgaggtacgaggacggtgatgtggaggactcctcccttcacctccgtaaggagaga
agaaagacggccgccggcgagcaagagggacggaagagccgccgcgtgtccagtcaaaac
ctcccggacctcctgtcctcctccgctggctcctccccctccgcctcccccactcccccc
accttcctctccccctccaccgccaacaaccccctctcccccaccatctcctccgcctcc
tcctccagcccaacgggggggttgggcagcagggcctcgtccccgctgtcctccgacccc
agcagccccacctccagtccgtccggatcccagagagggtctccgctgccccaccacacg
ccccccaacggtaccgtgaccgcagaggtggagtccaagtcaccgaccagcgcgagtcgc
tccttcctcagccaccacatgtcctctctgggtctgagcaggaggtccaggctcttctcc
aaaaccagctccatctctgaggagccttcagcctcctgcagctcctcctcctcagcctct
caccaggagaactcgtcccagttgaaccaggagcagctcggcaacaagacggagactaaa
accagtttaaactcagatgactgttctgtaaatccagacaagccggttctgagaaagttt
caagacaccttcctgcgcagcctggcagccactcagtgggagaagaagagaagaagtaaa
aacctcagccagtccaagctgtcctcctttgatgacaccataaacccgagcctgaagcct
gcagaggagggcggcagtgtcccgagtgaagagtggcctcgtcggagctccacctccagc
agtttggactctaacagacactcagactcccagaatgacccagcttcggagtttgatcgg
cagagcagcactctgaccgctgctgctcccaacaccaacaaagaagaaggccacttcctg
cccggtggagatgtgggcggtcgtggtcgtgtgttggagcgtctgtccagcttcacagcg
cgctcagtagagccgtccagccccagcgagagcagagcgtcacgcagggcggagctagag
gggctggaaggctccgcccaggcggcgctggcccgcctcgctgaggagcaacagacccgt
cagctccgtccacagagcagcgtggacgttgagggccccgctcgccgtctggagacgacc
ccgatgacccctctgggccccgggggcccccccgacgcctgggaccagctgcagctgagc
gccgccgccctgcgaatcaaagacctggacttctccgacctgctggacgaggaggacatc
gatgtcctggacatggacacctttgactcctcctcctcttcctcctgcttctctggcgtc
ccacctcctcctcctcttccatctctgggacccggtgttcctcctccccctcctcttcct
cccggtgttcctcctcctcctcctcttcctcccggtgttcctcctccccctcctcttcct
cccggtgctcctcctcctcctcctcttcctcccggtgctcctcctccccctnncttcctc
ccggtgccctctcggaagaagaagacggtgaagttgttctggcgggagctgaagcaggct
gacgggccggcccggtgccggttcggtcgggggacggtgtgggcgtctctggacaaagtg
tccgtggacacgacgcgactcgaacacctgtttgagtccaaagccaaggaactgaccgtc
gccaagaaaggacctgagacaaagaggtctgagattcaggttctggacccgaagaggagc
aactccatcaacatcggtatgactgtcctaccggccgtccacgtcatcaaggccgccatc
ctcaactttgacgagttcgccatcagcaaggaggggatagagaagatcctgaccatgacc
cccacagaggaggagaagcagaagatccaggatgctcagctggccaatcctgaggtccct
ctggggacggcggagcagttcctgctgagcctggcctccatcagcgccctgaccgcccgc
ctgcagctctgggccttcaagctcaactacgaggctctggagaaggagatcgctgagcct
ctgtttgacctgaagctgggcatggagcagctgtcctccaaccagaccttcaggaggatc
ctcgccacgctgctcgccatcgggaacttcctcaacagctccaatgctaaaggcttcgag
ctgggttacctggagaaggtggtggaggtgaaggacaccgtccaccgtcagactctactg
catcacacctgcagcctgctgctggagaattacccagaatcctctgacatctactctgag
atccccgccatcacccgctccgccaaagtggactttgagctgctgtcagagaacctggtg
cagctggagagacgctgcaaagcatcatgggacaacctgaaggtggtgaccaaacatgag
atgaaggcggttctgaagaacaagctgacggacttcctgaaggactgcacgcagaggatc
atcatcctcaaggtggtccaccgcagggtcaccaacaggttccactccttcctgctgttc
ctgggtcagccctcctcctccgtcagagacatcagagtgacttgtttctgtcgtatcatc
agtgagttctctctggagtaccggaccaccagagaacgggttctgaccctgaaacagaaa
cgagccgcacacagagagagaaccaagacccgcggcaagatgatcaccgagacggagaag
ttttcaggggcggtgcctgaggacgatggctcctcccccgtctccatggcagcggaggcg
gagccgggtcaggaggagcaccagaacatgaagaaccttctgaacagcagcgacagtctg
acggtggaccagagaggcctgagacgctccagagcggtccgcagtctcggcagagtgagt
ccgtcccagatgtctggagccaaagaagacgggaccgtctcccaggacgacgccacggac
gagatcatggaccggctggtgaagtccgtgacccagaacccctccgacagaccgtccagc
cccaagacccgcaaacggtcccgcctgaaccggaagtcattgaggaggactctgaagagc
gggctcagtctagacgtggttcaggctctgggactcaacagccagtctgcagaccgggtc
tga
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