Anoplopoma fimbria (sablefish): 129104441 Help Entry 129104441         CDS       T09102                                  Symbol itgb5 Name (RefSeq) integrin beta-5   KO K06588   integrin beta 5 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb04145   Phagosome afb04148   Efferocytosis afb04510   Focal adhesion afb04512   ECM-receptor interaction afb04810   Regulation of actin cytoskeleton afb04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:afb00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129104441 (itgb5)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     129104441 (itgb5)    04148 Efferocytosis     129104441 (itgb5)   09144 Cellular community - eukaryotes    04510 Focal adhesion     129104441 (itgb5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     129104441 (itgb5)    04810 Regulation of actin cytoskeleton     129104441 (itgb5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:afb04131]     129104441 (itgb5)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:afb04515]     129104441 (itgb5) Membrane trafficking [BR:afb04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     129104441 (itgb5) Cell adhesion molecules [BR:afb04515]  Integrins   Integrin beta subunits    129104441 (itgb5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_beta Integrin_B_tail EGF_integrin Integrin_b_cyt PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E Motif Other DBs NCBI-GeneID:  129104441 NCBI-ProteinID:  XP_054471099 LinkDB All DBs Position 16:21904703..21952415 Genome browser AA seq 800 aa AA seqDB search MWRWRTLLSCVLLETLLLHTARGLNMCMSGSATSCEECLLIHPSCAWCAQEEFGRGRSLT LRCDFSQNLQKRGCEARFIEYPTSSVSVLQNMPLSSKGSGSTQYDVVQIMPQKISVSLRP GDQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLALEMGKLTSNFRLGFG SFVDKNMSPFSYTAPKYQENPCSGYKLFPNCVPTFGFRHIVSLTDKVDRFNEEVQKQMVS RNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPHDGKC HLDDKNEYSASTEMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTTVEIL DQDSKNVIQLIIAAYNNIRSKVELSVWDHPEDISLSFTATCQDGKPLPGLRKCADLKIGD TVSFNVSVEARSCPPRGADQSFTIKPVGFKDRLEVSVDYQCDCGCSRTAQTNSSICSSLG TYNCGTCRCEPGYLGARCECQEGEASSMYASACRETAGKQVCSGRGECSCNQCLCYESEF GKIYGSYCECDDFSCARHKGILCSGHGECHCGECKCHAGYVGDNCNCSTETSSCIADDGQ MCSGRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRIADNQTCQR LCKDEIITVETLDTEDPGAVLCLYKTDNDCVMKFTYSEHASGQSILTALKEPECSGGPDA MMVLLAVVGSILLVGVVLLAVWKLVITVHDRREFTRFQNARSRARYEMASNPLYKQPVTT HFVETDFNMYGKSSFNGGVH NT seq 2403 nt NT seq  +upstreamnt  +downstreamnt atgtggaggtggaggacgctgctgagctgcgtgctgctggagacgctcctgctgcacact gccagaggtcttaacatgtgtatgagtggcagcgctacgtcctgtgaagaatgcctcctg atccaccccagttgcgcctggtgcgcacaagaggagttcgggagggggcggtctctcaca ttgcggtgcgacttcagccaaaacctgcagaagagaggctgcgaggcacgcttcattgag tatcccaccagcagcgtctcggtcctgcagaacatgcctctgagttctaaagggtccggg tcgacccagtacgatgtggtccagatcatgcctcagaagatctctgtcagcctgcggcca ggagaccagacgtggttcgggctgcaggtgcggcaggtggaggactacccagtggatctc tactacctgatggacctctctctttccatgaaagacgacctggacaccatccgtaacttg ggcaccaagctggccctggagatgggcaagctcaccagcaacttcaggctgggcttcggc tccttcgtggacaaaaacatgtcccccttctcctacacagcgcccaagtatcaggagaat ccatgcagtggatacaaactgttccccaactgtgtccccaccttcggtttccgccacatc gtctccctgacggacaaagtggaccgttttaacgaggaggtgcagaagcagatggtgtct cgcaaccgggacgcgccagagggcggattcgacgccatcctgcaggctgctgtttgtaag gaggagatcgggtggagaaaagaagcctaccacctgctggtgttcgccacagacgacgtt cctcacctcgctctggacggcaggctgggaggcctcgtccagccccacgatggaaagtgt cacctggatgacaagaacgagtacagcgcttccacagagatggactatccctctctggct cttctgggggagaaactggccgaaaataacatcttcctcatctttgccgtcacaaaacgg ctctacgttatttacaagaatttcacagcactcatacctggaactacagtagaaatcctg gaccaggactctaagaatgtaattcagctgatcatcgcggcttacaataacatccgctct aaagtggagctgtcagtgtgggatcacccagaggacatcagcctttccttcaccgccacc tgccaggacggaaagccgctgccgggcctcaggaagtgcgccgacttgaagatcggagac acggtgtcgttcaacgtgagcgtggaggcgaggagctgccctccccgcggcgccgaccag agcttcaccatcaagcctgtggggttcaaagaccgtctggaggtgtctgtggattatcag tgtgactgcggctgcagccggacggcgcaaaccaacagcagcatctgcagctccctaggt acttataactgcgggacctgtcgctgtgagccgggctacctgggcgcccgctgtgagtgc caggagggcgaggccagcagcatgtacgccagcgcctgccgggaaaccgcgggcaagcag gtctgcagcgggcgaggagagtgcagctgcaaccagtgtctgtgctacgagtcggagttc ggcaagatttacggcagctactgcgagtgtgacgacttctcctgcgcccggcacaaaggc atcctctgctcaggtcacggtgaatgtcactgcggggagtgcaaatgccacgccggctac gtcggcgacaactgcaactgctccacggagacgtcctcctgcatcgccgacgacggccag atgtgcagcgggcgaggcagctgcgtgtgcggccgctgccagtgcaccgagcccggggcc ttcggggacacctgtgagaaatgccccacctgccccgacgcctgtggcaccaaaagggag tgtatcgagtgccggcttttcaactcgggacgtatcgcagacaaccagacctgccaacgc ctgtgcaaggatgaaatcatcactgtggagaccctcgacacggaggaccccggtgccgtt ctttgtctctataagacagacaacgattgtgtcatgaagttcacgtattccgagcacgcc agcgggcaatccatcctcaccgctctcaaagagccagagtgcagtggtgggcccgacgct atgatggtgctgctggccgtggtcggcagcatcctgctggtgggggtggtgctgctcgcc gtctggaagctggtgatcaccgttcatgaccggagagagtttacacgcttccagaacgca cgctcacgagcccgatacgagatggcctccaaccctctgtacaagcagcccgtgactaca catttcgtagagacagatttcaacatgtatgggaagtcctccttcaacggaggggtccac tga

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