KEGG   Anoplopoma fimbria (sablefish): 129104500
Entry
129104500         CDS       T09102                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afb03032]
    129104500 (rif1)
DNA replication proteins [BR:afb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    129104500 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 129104500
NCBI-ProteinID: XP_054471184
LinkDB
Position
16:21975210..21997267
AA seq 2612 aa
MMMATAEPPSSSSFLPLLESLEDSAAGQSEQTDAYLTIANRLSGEEGRQFLPAVEKHFPR
LGKAILAHINSPTAELSQAALQALGFCLYHSHVVSAVPETFAAEILSALCSLVVKSTDKN
TCTRALWVISKQSFPPGVVGPKVSPILGTLESVWSREDIQSVVMEHEALNVIIRMLEQAP
AQMGDGALRWAKLIIPLVVHSASKVRLRAAAAMEMGMPLLLEKQMEVAGIMEPMMSSKLI
PELQKLFMSKNEANVLKLWPLFVKLLGKLLHRGGPFINSLLHLEELGFRSSSPTIKKIAF
IAWKSLIDNFALNPDILCSAKRMKLLMQPLASINVRTEVLLLTKVEVWWYLVVQLGPNLA
PNFDQVSVPLLHCTIGSDSSSVPGTPSRAVTQNGAVTPGTPMSAGFNSPANTSRMSLNSS
VQIPSTFPSIQLLGLEMLLHYFLGPDVIATAAKKKLILSLEPLNHPLLSGASSFTKHAAI
LTSNIRDGFINVGKEAPDALLAVLWTSLVRFVNLTIESVGSKKDRQGGEVLTLMLQALQS
IVASEALPADKVLILFEATVKGIPQRVLGSASYQVGKMDVLNGTPALFLILLLYNSSLIS
AYIEDERFFQSLQTLVGCGLSGPTSPLAFGEAVLAAIRRSAGSVQNKEQLWRMWSVMVSP
LTDTITQSNEVNQGDALEHNFSAINSALLFPITHLLHGTPLQQAAHKSMLSSWSKLYKVF
ARCSALVVTAEENICCEELCAKMTAAIDKDALKVPSTLNAVACILQVMVECVDFSPFTPQ
FQQKMKSPHTPVNWTRKRNKVLGNLSTFQSLLVQCLEVYLEGPESPSEATGAALVSILSA
LFTNLALANTIKEALTSLVRPLTLFYKQAASEPSKFSSQLQAKLEKLLCDVLGCLQTRSA
LAYDDALLALLSPLLCVAFPHKNKQLRGSVAQFWNATFGNSVSLTYPDEIRPILSQVKQK
TPIILPGFEVVSVPDELSGHYSSESSQMESNLSGMPVSSVGKRDSLLKKAAELKDSSSVK
ASKSVSTKLDFGSPKPPPRGVLEEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDIPAM
YNNLDASLDTTVFTQYTQSQEDSLDKLATEQADKVTKEAPGKVPQEVEIEDSEETQDFAS
PEALENMQENQQQQEEIIPESADVSMEDKAKSDDPAEDMDLQSTEGTSPNISGSSDLVTG
TPQKPNSRRQSFITLEKYAEGKPASPSSSSSFTGPLIKTSNSQERSKASKKSSARASRTS
TGPHSQDSQSSQTGSMNSQYPVNNPLDSPVRPKDSMTKSEPVRLTERLPSDPTEDEDLIP
DTQTEVEGNEGTQLATSSEEIQKSSQEEESEPSLDDSQSSPGEPRRSGRYRVKPLLPGED
PEERDEKYTLSKRRRSGEELKGDSPKSSSAQNRRNTRSMQAAEEDSGLRTRSQRDKRESS
QTNSQGRSNKKIKLFSSSQDFLDKPESKRRSSSVRESSQTDLPSDNESQSQGKQRRRSKA
SLETKEDAEMKKKVLPDKEESSQTAKHDLVELSKKDEDKPKTDSKAITPSPPTGGKSQEY
EIVEQTVKDGDKQNRDSETITPSPETGVKSQEFELVEPTEKDCDKQKGSQTITPSPQTGG
TSQEFEIVEQAEKDDFKQNKDSQIITSSSQTGDLSQESERLEKTNKDEIDSQIVAAPPAS
DESQDGTNKSKKLVNKSEDKDKPITSESTDDNLSQEDSQVITPSSSESQSLRRSRRSKAS
SEEAESQDKSENKDSLDRKRRSNSQPEARIGGRTRRSMVQEEQSKSSPTATPESSQSLEP
AGSSESSKGRGRYSRRSSPALPAAAKESSESESSEVKENLPVPKKRGRKPRASLPSPLTI
ESKEGKMNKSMVKDDSDTSQKADSQSIEAKTTTDLEDSQASQDLQDSESLQVTCNAEEQS
NEESPMEVEVEVEVEVEGEAAVEKTETEDLKKIESPSVSPLKEQTQEDSNVENTSSQEGD
TGDLPSADLPESVGTSSEQTDEKLPCDPSVSSAEDELAPPDGTTEKLQVSEPSEEKAEEV
FEESGDNVTGKQQDDSDSTHQEDPVVPVEDRAEDVHDASFGQTPVECPTSSKDEEPSASD
NEDDSTTQKAEANAGDDVITPLQESDKDDKAQTAECNDEEETAECNDGEETAERNDGEET
AECNDEEETAECNDEEETAERNDGEETAECNDEEETAECNDGEETQTADAENDVVVNLDA
ALADVGNASEFTESTSKDVFSDSPAKQKDLEALMAADVGESPSSGRTRGTWSPSASPSTS
ILKKGLKRPLEEETTSPLVKSRRVSFADPIQHQELADDIDRRSPAVRTSSPRRSKVSGIP
QPKYVTTPTKGLLILSPRNLHSPGYKSSKKCLISEMSQEPRPVSRDCIYPALVGCSTPVE
AVLPQISSNMWSRGFGQLVRARNIKTVGDLSALTPSEIKTLPIRSPKISNVKKALRSYEQ
QRKGRGVDELKSFDETEMMTSELEENAAPQNQDEEDKTSGETLATELLDEPVPADERPEQ
DGSGNQTPDTPTGEHEPVERLHPEGRLQSEVEVLSGRMTPLELSYCSSQQLVQMHDRLGG
LMRSVVVELQTRLCQTEGRPRRARSPTQVLKD
NT seq 7839 nt   +upstreamnt  +downstreamnt
atgatgatggcgacggcggagccgccgagcagttccagcttccttcccctgctggagtct
ctggaggacagcgccgcgggacagtccgaacagacggacgcctacctcaccatcgcaaat
cggctcagcggagaggaaggccgacagtttctccctgcagttgaaaagcactttcctcgt
ttgggcaaagccatcttggcccacataaacagtccgactgcagagttgagccaagcagca
ttgcaagctttagggttttgtttgtaccattctcacgttgtctcagcagtgcctgaaacc
tttgcagcagaaatactttcagcactttgctccctggtagtgaagtcgacagataagaac
acgtgcaccagagcattatgggtcatctccaaacagagctttcctccaggtgtggtcggc
ccaaaggtgtcgcctatactgggaacactggagagtgtgtggagccgagaagacatccag
tctgtggtgatggagcacgaggccttaaatgttatcatcaggatgctggagcaagctccg
gcccagatgggtgacggagctctgaggtgggcgaagctcatcatcccgctcgttgtccac
tccgcctccaaggtgcgtctacgggccgcagccgccatggagatgggcatgcctcttctg
ctggagaaacagatggaggtggccggtatcatggagccgatgatgtcctcaaaactgatc
ccagagctccagaagcttttcatgtccaagaatgaagccaatgttctgaagctctggccg
ttatttgtgaaactgctcgggaagttgctgcacagaggaggtcctttcatcaacagtctg
ctgcatctggaggaactgggtttccgcagctcttctcccaccatcaagaagatcgccttc
atcgcctggaagagtctcatagataactttgccctcaatccagacatcctgtgcagtgcc
aaacgtatgaagctcctgatgcagccgctcgcatccatcaatgtccggaccgaagtcctg
ctgctcaccaaggtggaggtctggtggtacctggtggtccaactcgggcccaacctggca
ccaaactttgatcaggtttctgttcctctgcttcattgcaccattggatccgactcctct
tcggtcccaggcactccgtctagagccgtcactcaaaacggtgccgtcacacctggcacg
cccatgtctgcaggcttcaacagtccggccaatacgtcccggatgagcctgaactccagc
gtccagatcccctccaccttcccctccatccagctgctgggcctggagatgttgctccac
tattttctgggaccagatgttatcgccacagcggcaaagaaaaaactcatcctgagtctc
gagccattgaaccacccactcctctccggcgcctcttctttcactaaacatgctgccatt
cttacctccaacatcagagatggattcatcaatgtcggcaaagaagctccagatgctctt
ttggccgttttatggacgagtcttgtccggtttgtcaacttaactatagaatctgtaggc
agtaagaaggaccgtcagggcggggaggtgttgacgctgatgcttcaggctctgcagagc
atcgtcgcctcagaagctctgcctgcagacaaagtcctgatcctgtttgaggccacagtg
aaaggtattccccagagagttctcggctccgcctcctaccaagtgggcaagatggatgtt
ctgaatggaacgccggctctgttcctcatcctcctcctctacaacagcagcttgatctcc
gcctacatcgaggacgagaggttcttccagagccttcagactctggtgggctgcggtctg
tcgggccccacttcccctctggcgtttggggaggcggtgctggccgccatcagacgcagc
gccgggtccgtgcagaacaaggagcagctgtggaggatgtggagcgtgatggtcagcccg
ctcaccgacaccatcacacagtcgaatgaagtgaaccaaggtgacgctctggagcacaac
ttcagcgccattaactctgccttgttgttccccatcacacacctactacatggaacacca
ctacagcaggcggcccataagtcgatgctttcttcgtggtccaaactgtacaaagtgttc
gcccgctgctccgctctcgtggtcacggctgaggagaacatctgctgcgaggagctctgt
gcgaagatgacggctgcgatagacaaagacgccctgaaggttccttctacgttaaatgct
gttgcctgtatcctccaagtcatggtggagtgtgtggacttctcgccgttcacgcctcag
tttcaacaaaagatgaagtctcctcacactccagtaaactggacgaggaagaggaataag
gttctggggaatctgtccaccttccagtccctgctggttcaatgtctagaggtctatctg
gagggacccgagtctccctctgaagccacaggagccgccctggtgtccatcctgtcggct
ctcttcaccaacctcgctctcgccaacaccatcaaggaagctctgacttctctggttcga
cctctgaccctcttctacaaacaagcagccagcgagccgtctaagttctcctcacagcta
caggcaaagttggagaagctcctctgtgacgttctcggctgcctgcagacgcgctctgct
ttggcgtacgacgacgccctcctggctctgctctctcctctgctctgtgtggcgtttcct
cacaagaacaagcagctccgcggctcggtcgcccagttctggaacgcaacgttcggcaac
tcagtcagcctcacttaccccgacgagatcagaccaatattgagccaagtgaagcagaag
accccgatcattcttcccggctttgaggtcgtcagtgttcccgacgagctcagcggacat
tactctagtgagagctcccagatggaatcaaacctcagcgggatgccggtttcgtccgtg
gggaagagggactcgctgctgaaaaaggctgctgagctgaaggacagcagctccgtgaag
gcctccaagtcagtttctacaaagctggactttggctctcctaagcctcctcccagagga
gtgttggaggaagaggcctccatcgactttgtcttcattcctcctgagacgaaggagcga
gttctgactgagcaccagaaggaggtgaaaaggactaaaagggttgacatccccgccatg
tacaacaaccttgatgcttctctggatacaacggttttcacccagtacacacagagtcaa
gaagactctttggacaaactggcaactgaacaagctgacaaggttaccaaagaggctcct
ggcaaggttcctcaggaagtagaaatagaagattcagaagagactcaagattttgccagt
ccagaagcgttggagaacatgcaagaaaaccagcagcagcaggaggagatcattcctgag
tcggctgacgtttctatggaggataaagccaagagtgatgatccagcagaagacatggac
ctgcagtccacagaaggcacaagtcctaacatctctggttcttcagatttggtcacagga
actccccagaaacccaacagtcgccgtcagtcctttatcaccctggagaagtatgctgag
ggaaaacctgccagccccagcagctcgtcctccttcacaggtcccctcataaagacctcc
aacagccaagaacgctccaaagccagcaagaagtcgtccgctcgggcttcccggacgtcc
actggtcctcactctcaggattcccagtcttcccagacaggaagcatgaactcgcagtat
cctgtgaacaatcctcttgattcccctgtaaggccaaaagactctatgacaaaaagtgag
ccggtaaggctgactgagagactgcccagtgacccaacagaagacgaagaccttatcccg
gacacccagactgaagtggagggcaatgagggtacacaattggctacttcatcagaggaa
atacaaaaatcaagccaggaagaggaatctgaaccatctctggatgattctcaatcttct
ccaggagaaccaaggcggtccggacgctacagagtcaaacctctgcttcccggagaggac
cctgaggaacgggatgagaaatacacgctgtcgaagagacgacgttctggagaggaactt
aaaggggattctccaaagtcgagctcagcgcaaaacaggcgaaacacgagaagtatgcag
gctgctgaggaggacagtggattacgaacaaggtctcagagggacaagcgtgagtcgagc
caaaccaactctcagggacgatcaaacaagaagatcaagctgttcagcagttcacaggac
ttcctcgataaacctgaatccaaaaggagaagcagcagtgtgcgggagtccagccaaact
gacttgccgtctgataacgaaagccagtcacagggtaagcaaagacggcggagtaaagcg
tcgttggagaccaaggaggatgctgaaatgaagaaaaaggttttgcctgacaaggaagag
tccagccaaactgccaaacatgatcttgtagaactgtccaaaaaggatgaagataagcca
aagacagattctaaggcgatcactccttcccctccaacaggtggcaaatcccaagagtat
gagattgtagaacagactgtaaaagatggtgataaacaaaatagagattctgaaacgatc
actccttcacctgaaactggtgttaaatcccaagagtttgagcttgtagaaccgactgaa
aaagactgtgataagcaaaaaggttctcaaacgatcactccttctcctcaaactggcgga
acatcccaagagtttgagattgtagaacaggctgaaaaagacgattttaagcaaaacaaa
gattcgcaaattatcacgtcttcctcccaaactggtgacctatcccaagagtctgagcgt
ttagaaaagaccaacaaggacgagatagattctcagatagtcgctgcccctccagctagt
gacgagtcccaagatggaaccaacaaatcaaaaaagttggtgaataaatcagaggacaaa
gacaaacccataacaagtgaaagcacagacgacaaccttagtcaagaagactctcaagtg
atcacaccctcatcttctgaaagccagtctctgcgccggtccagaagaagcaaggcatca
tctgaggaagcagagtcgcaagataaaagtgaaaataaggattcattggacagaaagagg
cggtctaattctcagccagaggccagaattggaggtaggaccagaaggagcatggtacaa
gaggagcagtcaaagtcaagtcctaccgcaaccccagagagttctcagtcattagagcct
gcagggtcatcagaatcctccaaaggaaggggccgatactcaagaagatcttctccggcg
ttgccagcagccgccaaagaatcctcggagtctgaatcctcggaggtcaaagaaaatctc
cccgtgcccaaaaagagaggacggaaacctcgagcgtctcttccaagtcctctcaccatt
gaatctaaagaaggcaaaatgaataaaagtatggtaaaggatgattctgatacttctcaa
aaggccgattcacaaagcatagaagctaaaactacaacggatttagaggattcacaggca
tcccaagacctgcaggactctgaatcgctccaggttacgtgtaacgctgaggagcaaagt
aatgaagaatcaccgatggaggtggaggtggaggtagaggtggaggtagagggtgaggct
gctgtagagaaaactgagactgaggacctaaagaagatcgaatcacccagtgtgtcgcct
ctcaaggagcaaacacaagaggactcaaacgttgagaatacctcttcacaggaaggtgac
actggtgatttgccatctgctgacctgcctgaatcagtcgggaccagttctgagcagact
gatgaaaagttgccctgtgacccgtctgtgtcatctgccgaggacgaactagcgcctcct
gacgggacaacagagaaactgcaggtctccgagccttcagaggagaaggctgaagaagtg
tttgaagaatccggggacaatgttacaggaaaacaacaagacgactcggattcaacccac
caagaagatccagttgttccagtggaggacagagctgaagacgttcacgatgcgtccttt
ggacaaacccccgtcgagtgtccaacttcttcaaaggacgaggaaccgtctgcttcggac
aatgaagacgactcgacaacccagaaagcggaggccaacgcgggagacgacgtcatcacg
ccgctgcaggagagcgataaagacgacaaagcccaaactgcggagtgtaacgacgaagag
gaaactgcggagtgtaacgacggagaggaaactgcggagcgtaacgacggagaggaaact
gcggagtgtaacgacgaagaggaaactgcggagtgtaacgacgaagaggaaactgcggag
cgtaacgacggagaggaaactgcggagtgtaacgacgaagaggaaactgcggagtgtaac
gacggagaggaaactcaaaccgccgacgctgagaacgacgtggttgtaaatctggatgcc
gctctggccgacgtcggcaatgcttcagagttcacggaatcgacaagcaaagatgttttc
tctgattctccggcgaagcagaaggacctggaggctttaatggcggcagatgttggtgaa
agccccagcagtggaaggaccagaggaacctggtctccctcagcctccccatcaaccagt
attctaaagaagggcctgaagagaccgctagaggaggagaccacctcaccgcttgtcaaa
tccagacgtgtttcttttgccgatccaatccagcatcaggaactagcagacgacatcgat
cgtcgcagcccggccgtcagaaccagctcccccagaagatccaaggtcagcgggatccca
cagcccaagtatgtgactacaccgacaaagggcctgctgatcctgagtcccagaaatctg
cacagtccaggttacaagagctccaagaaatgcctgatttctgaaatgagccaagagccg
cggcccgtctccagagactgtatctatcccgccctggttggctgctctactcctgtggaa
gctgtgctgcctcagatatcctccaacatgtggtctcgtggtttcgggcagcttgttcga
gcgagaaacatcaaaacggtcggtgacctcagcgctctcactcccagcgaaatcaagact
ctgccaatccgctccccgaagatctccaatgtcaaaaaggcacttagaagttatgaacaa
cagcgtaaaggacgaggtgtcgatgagttgaagagttttgatgaaacggagatgatgacc
tctgaactggaggagaacgcagctcctcaaaaccaggacgaggaggataagacctcagga
gagacactagcaaccgagctgttggacgagcccgttcctgcagatgagaggccggagcaa
gacggctctgggaatcagacccccgacacgccgaccggagaacacgaacctgtagaacgg
ctgcaccccgagggacggctgcagtcggaggtggaggtcctgagcggcaggatgactcca
ctagaactcagttactgctcctcacagcagctcgtccagatgcacgaccggttaggaggc
ctgatgaggagcgtggtggtcgagctgcagacgcgcctctgccagaccgaaggccgaccc
cgaagagcccgttcccctacccaagtgttaaaagactaa

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