Anoplopoma fimbria (sablefish): 129104561
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Entry
129104561 CDS
T09102
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
afb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129104561
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129104561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129104561
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
129104561
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129104561
Multi subunit type E3
ERAD complex
129104561
LMBR1L-GP78-UBAC2 complex
129104561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
129104561
NCBI-ProteinID:
XP_054471265
LinkDB
All DBs
Position
2:13068494..13077727
Genome browser
AA seq
621 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTDPGFGVLETDETPVPTEVDLEHL
NNDIINTELTTTVLWYIATDSLFVWVLVNTFCCLLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHVRVLCLLVSLLLDCCGLAIGCGGLLGASHGMHTFSFMAAECLLVTVRTGHVIMRYSI
HLWDLNHPGTWESKGTYVYYTDFIMELTMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLR
YLFHEVQRRVRRHKNYLRVINNMEARFAVATAEELAANDDDCAICWDTMLTARKLPCGHL
FHNSCLRSWLEQDTSCPTCRTSLNINGDGAQARGQQQGGGLEDNIGPVGAAPDAIPHINQ
HNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPSYLVM
QDLQLTRSVEVTTDNILEGRIQVPFPTQAIERAPTQASTEGQEGSSGAAEQGLSESENME
VRGGRFSKSAEERQKMLKQRKEEMILQARRRYLNSSPEDPDEDLPGLEEDIVPELNLTAL
RRRTMAAAAERRMHTHQDPAP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttctggagaggtttccttggcccagcctgcagacctacaccgcacta
agtgtggctttgctcgctggcagcatctttagtgcctacaccactgtgactgatcccggg
ttcggggtcttggaaactgatgaaacaccagtccccactgaagtggatctcgaacatcta
aacaatgatattatcaacacagaattgacaaccactgtcctgtggtatattgccactgac
agtctctttgtatgggtattggtcaacacattctgctgcctgttgatgttgattgctaaa
atgattcagtatgtagtgtttggcccgctcagagttagtgagaagcagcacctgaaagat
aaattctggaatttcatcttctacaagttcattttcatcttcggggttttgaacgtgcag
acagtggaggaggtggtcatgtggtgtttgtggttctctgccctggtctttctccacctc
atggtgcagctctgcaaagaccgatttgaatatctgtccttctcaccctccactcccatg
aacagccatgtacgagtgctttgtctactggtctcattgctgttggattgctgtggtctg
gctattgggtgtgggggtctgctaggagcttcccatggcatgcacaccttctcttttatg
gcagcagagtgtctgctggtgactgtgcgcactgggcatgtcatcatgcgatattccatt
catctttgggatctgaaccatccagggacctgggagagtaagggaacatatgtctattac
acagacttcatcatggagctgactatgctcttcctggacctcatgcaccatatccatatg
ctgctttttggaaacatctggctgtccatggccagcttggttatcttcatgcagctgcgg
tatctcttccatgaggttcagcgccgtgtccgccgacacaagaactaccttcgtgtcatc
aacaacatggaggccagatttgcagttgctactgcagaggagctggcagccaatgatgat
gattgtgccatctgctgggataccatgttgacagcacgcaaacttccctgtggccatcta
ttccacaactcctgtttgcgctcatggcttgagcaggacacctcgtgtccaacatgtcgg
acatccctgaacattaatggggacggggcccaggcgagaggccagcagcagggcgggggc
ctggaagacaacatcggcccagtaggagctgctccggatgctataccacatatcaaccaa
cacaatcacttcttccactttgatggatctcgtattgccagctggctgcccagtttctca
gtggaagtgatgcacaccaccaatatcttgggcattgctcaggccaacaactcccagctc
atggccatggcccatcagatccaggagatgttccctcaggtgccctcatacctggtgatg
caggatctgcagttgacccgctctgtagaggtcaccactgacaacatcctggagggacgc
atccaggtgcctttcccgacacaggccatagagcgtgctcctacacaggcgagtacagag
gggcaggaagggtccagtggagcagctgaacagggcctcagtgagtcagagaacatggag
gtcagaggaggtcgcttctctaagtcggcagaggagaggcagaagatgttaaagcagagg
aaagaagagatgattctgcaggcccgcaggagatatctgaacagcagtccagaggacccg
gatgaggatttgcctggacttgaggaggacattgttccagaattgaacttgactgcgctg
agacgtagaaccatggcggcagctgcagagagacgcatgcacactcaccaagaccctgca
ccttga
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