Anoplopoma fimbria (sablefish): 129104578
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Entry
129104578 CDS
T09102
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00100
Steroid biosynthesis
afb01100
Metabolic pathways
Module
afb_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
129104578 (lss)
Enzymes [BR:
afb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
129104578 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
DUF7374
EspB_PE
DUF386
Motif
Other DBs
NCBI-GeneID:
129104578
NCBI-ProteinID:
XP_054471294
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Position
16:8201079..8213581
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AA seq
735 aa
AA seq
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MTEGTHLRRRGGPYKTEAATDLSRWRLSNVEGRQTWCYVEDQDTPDREQTMLEAHSLGLD
TSMFVSGSEAAHTAVDAALKGMHFYRHLQAEDGHWAGDYGGPLFLLPGLLITCHMAKIPL
AEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYISLRILGLEPDDPDMVRARNN
LHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPSWMPAHPSTLWCHCRQVYLP
MSYCYAVRLAAEEDSLILSLRQELYVQDYATINWPAQRNNVAACDMYTPHSTLLTVAYMV
LNVYEAHHSTTLRGKAVKELYEHIQADDRFTKCISIGPISKTINMLVRWYVDGPSSPVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDNARLAECLRDAHQFLT
ITQIPENPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQELCPSIGQPVP
SERLYDAVDVLLSMRNSDGGIATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALKHFQKEYPEHRAEEISSTLREGLEYCRKVQRPDGSWEGSWGVCFTYGIWFGLEAFACM
GHVYKDGDVCVEVQRACQFLLDRQMPDGGWGEDFESCEQRRYVQSSSAQIHNTCWALLGL
MAVRHPDRWAVERGVQLLIDSQLPNGDWPQENIAGVFNKSCAISYTSYRNVFTVWTLGRF
STLYPGSPLAGKVKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggggacgcacctgcggaggcgaggggggccgtacaagacggaggcagccaca
gacctgagccgctggaggctgtctaacgtggagggcaggcagacctggtgctatgtggag
gatcaggacaccccagaccgagagcagacaatgctggaagcccattctctgggcttagac
acgagtatgtttgtgtctggctctgaagctgcccacacggctgtagatgcagctctgaaa
ggtatgcacttctacaggcacctccaggcggaggacggtcactgggcaggggactacggt
ggacctctcttcctgctcccaggtctcctgatcacatgccacatggctaaaatccccctg
gccgaagcctggaagaaagagatggtgaggtacctgcgctctgtgcagctgccagatgga
ggctggggtctacatattgaagataagtcgaccgtctttggcacagcgctgagctacatt
tcattaaggatcctgggattagagcctgatgatccagatatggttcgagccaggaacaac
ctgcacagcaaaggaggcgctgtggggattccctcatggggtaaattctggttggccatc
ttaaatgtctacagttgggagggaatgaacacactgctgccagagatgtggctgtttccc
tcttggatgccagcccacccctcgaccctttggtgtcactgtcgccaggtttacctgccc
atgagctactgttatgctgtcagactggctgcagaggaagactccctgatcctcagcctc
agacaggagctgtatgtccaggactatgccactattaactggcccgctcagaggaacaat
gtggcagcatgtgacatgtacacacctcacagcacattactcacggttgcctatatggtg
ttgaacgtgtatgaagcccaccacagcaccacactgagaggaaaggctgtcaaagaactg
tatgaacacatccaggctgatgaccgcttcactaaatgcatcagcattggaccgatctcc
aagactatcaacatgctggttcgctggtatgtggatggtccctcatctccggtctttcag
gagcatgtgtccaggatcccagactacctctggttgggattagatggcatgaaaatgcag
gggaccaatggatctcaactctgggatacttgttttgctgtacaggctttccttgaggca
ggagcccaagataacgccagactagccgagtgcctccgagatgcccatcagtttctcacc
atcacacagatacccgagaatcctcctgagtaccagaagtactacaggcagatgaacaag
ggaggcttccccttcagtacccgcgactgtggttggattgtggctgactgcacagcggag
ggcctgaagtcagtgatgctgctgcaggagctttgtccctcaatcggccagcctgtcccc
tcagagcgcttgtatgatgctgtcgatgtgttgctgagcatgagaaactctgacggtgga
attgccacatatgaaactaagagaggggggaaactcctggagctgctcaacccgtccgag
gtgtttggtgacatcatgatagattatacctacgtggagtgtacctcagcagtaatgcag
gctctgaagcacttccagaaggaataccctgaacaccgtgctgaggagataagttccact
ctaagagaaggactggagtactgcaggaaggtgcagaggcctgatggatcctgggaaggg
tcctggggagtgtgcttcacatatggaatatggtttggccttgaagcctttgcttgtatg
ggtcacgtctacaaggatggggatgtgtgcgttgaggtgcagagagcctgccagttcctg
ctcgaccggcagatgccagacggaggctggggggaggactttgagtcttgcgagcagcgg
cgctacgtccagagcagcagcgctcagatccacaacacctgctgggctttgttaggcctc
atggctgtcaggcatcctgacaggtgggccgttgagagaggagttcagctgctgattgac
agccagctgcccaacggagactggccacaggagaatattgcaggtgtgttcaacaagagc
tgtgcgatcagctacacctcctacagaaatgtcttcacagtctggaccctcggtcgcttc
tcaacactttaccccggcagtccattggctgggaaggtcaagctgtga
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