Anoplopoma fimbria (sablefish): 129104590
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Entry
129104590 CDS
T09102
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b
KO
K09364
POU domain transcription factor, class 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129104590 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129104590 (pou2f1b)
03021 Transcription machinery [BR:
afb03021
]
129104590 (pou2f1b)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129104590 (pou2f1b)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
129104590 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129104590
NCBI-ProteinID:
XP_054471322
LinkDB
All DBs
Position
16:complement(9831858..9846897)
Genome browser
AA seq
669 aa
AA seq
DB search
MADGGAASQDESSGPDAKVKNQSETTKCAMESGDRNTGIQINGFDFQRQMVPTTSAITNA
HAQALLQQLTLTPAQQQMLIQQAQAQLLAAAVQHSASQQNSTTGASISASAATPISQLPL
SQPIQIASQLQPQNLSLPQFVLVQPGHPIATLQQPAQFIISQPTQAQQGILQAQSLLNLP
QSQANLLPTQQSITLATQPATPTRTTAATPIQSLPHSQTPPKRLDTPTMEEPSDLEELEQ
FAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWL
NDAVCAENLTSDQSLSSPSALGSPGMGIEGINRRRKKRTSIETNIRVALEKSFLEQNQKP
TSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGLGSTPIKTIFTPSSPLVASTA
SLVSSPTINTPTTLTVNPVMPLTSTSVSNLSFTGTTVGATNTASVISTAPIFTTASSPSL
SPSPTTIQSSTTDSKVQTIINQTPTSIATTLGTGQVMVASGLSAALQGAQLPSSFAAMAA
AAGLNSGLMASSQFTPGGALLSLTGGLGSALSPALLSNSTLATIQGVYQSLASGGLTSLD
GSNLLFANTSAGTPIFLTPQNLSLLTGTPLSLVSAGPGGLQVTADAHHQATTAAVPVQAS
TITTASKAQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagatgctaaagtgaaa
aatcagtcagaaactactaaatgtgcaatggaaagtggtgacaggaacaccggaatccaa
atcaatgggttcgactttcagagacagatggtgccaaccacaagtgcaatcactaatgca
catgcacaagccctcctccaacagttgaccctgaccccagcgcagcagcagatgttgatc
cagcaggcccaagctcagctcctggctgcagccgtgcagcattcggccagccagcagaac
agcaccactggggccagcatctcggcctccgcagctacacccatcagccagctgcccctg
tcacagcccatccagatcgcctctcagctacagccgcagaatcttagtctgcctcagttt
gttctggtgcagcccggccacccgatcgccacactacagcagcctgctcagttcatcatc
tcacagccaacgcaggcccaacagggcatattgcaagcccagagtcttctaaatctacct
caaagccaagctaacctcctgccgactcaacaaagcattacccttgcaactcagcctgcc
actccaacccgcacaacagcagccacacctattcagtccctgccccacagtcagacacca
cccaaacggttggacacccccaccatggaggagcccagcgatctggaggaactggaacag
tttgccaagaccttcaaacagaggcgcatcaaactgggcttcacacagggggacgttggc
ctggccatggggaagctttatggaaacgacttcagccaaactaccatctctcgctttgag
gccttgaatctgagctttaagaacatgtgcaaactcaagccattgctggagaagtggctc
aatgatgctgtttgtgcagagaacctgacatctgaccagtccctgtccagccccagtgcc
ctgggctccccgggcatgggcatagaggggatcaaccgcagacggaagaagaggaccagt
attgagaccaacatccgagtggccttagaaaagagctttctggagcagaaccaaaaacct
acctctgaagagatcaccatgatcgccgaccagctcaacatggagaaggaggtgattcgg
gtctggttctgcaatcgccggcagaaagagaagaggattaacccccccagcagcggatta
ggcagcacccccatcaaaaccatctttacccccagtagccctttggtggccagcacagca
agccttgtgagcagtccaactattaacacacccaccactctgactgtaaacccagtgatg
cctctcaccagcaccagcgtctccaatttgtccttcacaggcacgacagttggagccaca
aacaccgcatccgtcatctccactgcacctatatttactacagccagctctccgtcttta
agtccctcgccaacgaccattcagtcctcgaccacagatagcaaggtgcagaccatcatc
aaccagaccccgacatccatagccacaactttagggacaggtcaggtgatggtggcatca
gggctgtctgcggcgctgcagggtgctcagttacccagcagcttcgctgctatggctgct
gccgctgggctcaactcaggactgatggcctcctcccagttcactccggggggggccctg
ctcagtctgactggcggtcttggcagcgcgctgagtcctgccctcctgagcaacagcacc
ttggctaccatccaaggtgtgtatcaatctctggcttcgggtggcctcacttctctggac
ggcagcaacctgctgttcgccaacacttctgccggcacgccgatcttcctgaccccccag
aacctgtcgctgctcaccggcacccccctcagtctggtgtcggccgggccgggtgggctg
caggtcactgctgatgctcatcatcaagccaccacggctgctgtgcctgtgcaagcctcg
accattaccactgcctccaaggctcagtga
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integrated database retrieval system
