Anoplopoma fimbria (sablefish): 129104603
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Entry
129104603 CDS
T09102
Symbol
calcrla
Name
(RefSeq) calcitonin gene-related peptide type 1 receptor isoform X1
KO
K04577
calcitonin receptor-like
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129104603 (calcrla)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129104603 (calcrla)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
afb04030
]
129104603 (calcrla)
G protein-coupled receptors [BR:
afb04030
]
Secretin receptor family
Calcium-regulating peptide
Calcitonin
129104603 (calcrla)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_2
HRM
Motif
Other DBs
NCBI-GeneID:
129104603
NCBI-ProteinID:
XP_054471344
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Position
16:complement(7353341..7379715)
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AA seq
501 aa
AA seq
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MTVLDILLLCSRSAAVKSSTSFDMAKRKMDNIVRSGMVALILLCDLTKIFVKASLEVNET
QQQHPTNVYHDISITRNQIVTAQFECYQKIMKDDPQGRQEPMCNRTWDGWLCWDDTKAGV
NSEQHCPDYFQDFDPSEMVTKICTDSGNWFHHPESNRTWTNYTRCNEHTKEGRVTAMNLF
YLALIGHGLSLTSLFVSLGIFFHFKSLSCQRITLHKNLFFSFVLNSVITIIWLTVVANNQ
ELVQRNPTSCKVFQFIHLYLFSCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYLLGWGF
PLIPASIHAVARSYYYNDKCWISSKTSLLYIIHGPICAALLVNLFFLLNIVRVLITKLKV
THQAESSLYMKAVRATLILVPLLGIQYVLIPYKPAGRVSSEIYDYIMHILMHYQGLLVAT
IFCFFNGEVQAVLRRHWNQYQIQFGSSIGNHSDALRSASYTASSITEVQGCYSIDGHTEH
MNGKGYHDADPSILKSDSPFA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgcttgatattttgcttctctgttccagatctgcagctgttaaatcatcaacc
agctttgacatggccaaaaggaagatggataacattgtgcggagtgggatggtggcactc
atactgctgtgtgatctaacaaagatttttgtgaaggcaagcctagaggtgaatgaaacc
cagcagcagcatccgaccaacgtctaccatgacataagtatcaccaggaaccagatagtt
acagcacagtttgagtgctatcaaaagataatgaaggacgatccccaaggcagacaagag
cccatgtgtaatcgcacttgggatggctggctgtgttgggacgacaccaaagcaggtgtg
aactcagagcagcactgccccgactacttccaggattttgatccttcagagatggttaca
aagatctgcaccgacagtggtaattggttccatcatccggagagcaaccggacttggacc
aactacacccgctgcaatgaacacaccaaggaaggcagagtgactgcaatgaatcttttc
tacttggctctcataggacatggcctgtcactgacctccctctttgtctccctcgggata
ttcttccatttcaagagtttaagttgccaaaggatcacgctacataaaaacctcttcttc
tcttttgttctgaactctgtgattaccatcatttggttgacagtggttgcaaacaatcag
gagcttgtgcagaggaatccaacaagctgtaaagtgttccagttcattcatctatacctg
ttcagctgcaattacttctggatgctgtgtgagggaatctacctgcacactctcatcgtg
gtggctgtgtttgctgagaagcaacacctgatgtggtactatcttttaggctggggcttt
ccactcattccggcttccatacatgccgttgctcgaagttactactacaacgacaagtgt
tggataagctccaaaacatcgctactctacatcatccacggtcccatctgtgctgctctt
ttggtcaatttgttctttctactaaacattgtgcgagtgctcatcaccaaactgaaggtg
acccaccaagcggagtctagtctctacatgaaagccgtgagggccaccctcatcctggtg
cctcttctgggaatccagtacgtcctgatcccctacaagccagcgggacgggtgtcctcc
gagatatacgactacatcatgcacatactaatgcattaccagggtctgctggtggccacc
atcttctgctttttcaatggagaagtccaagcggttctgaggaggcactggaaccagtat
caaatccagtttggaagcagcataggaaaccattcagatgccctgcgttcagcctcctat
acagcttcctccatcacagaggtacagggttgctacagcatcgacggccacacagaacac
atgaacggcaagggctaccacgacgccgacccctctatcttaaagtcggacagccctttc
gcctga
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