KEGG   Anoplopoma fimbria (sablefish): 129104622
Entry
129104622         CDS       T09102                                 
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X1
  KO
K15188  cyclin T
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129104622 (ccnt2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afb03021]
    129104622 (ccnt2a)
Transcription machinery [BR:afb03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     129104622 (ccnt2a)
    Brd4/P-TEFb complex
     129104622 (ccnt2a)
    7SK RNP complex
     129104622 (ccnt2a)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 129104622
NCBI-ProteinID: XP_054471373
LinkDB
Position
16:complement(224592..234079)
AA seq 713 aa
MAACRGSSSKWFFTREQLENTPSRRCGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMHHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQEQPLDT
KSNAYLQQAQELVILESIVLQTLGFEITIDHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVISCVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKGDSSQLNDNSFPGPSMLQDHGDAPLNSSFSKAG
GAFPVAMPGQSGGGALSLDALVGTYNPASHSEWPLSNQSQAGYPSTCIKEEPLNIPLQEP
TLSLQTSASSLAYRTDKTLDFIPVKQEQKGAGGSGSGKHQQPPQSTYPPPAQPPPPQPSP
AQKLSLDKYREKHAAELAVSGQKRSQEQHGGIMDCDMRGDMLFSSSSTYASSFSASQGDH
RKHSQPHQASHGGGGSTTASPMKIKVPSSSASGQDRRHHSDKRDKGSLKLRLAVPGSGGS
SQLDRSGQPIKDELKMKIKVSSSERHSSSDEGVAANNIKSKHSSPLVIKEKQHRGADQSL
HRHHKHSHTHPHTHSGNGGAGLLRGPPGLVGMEGMALPPPGSTSLSSSRKRVYPEAGHNH
HPSSSFSTSCSKVSKISKGGTGAAGTTSFSLPFSPPRSSPVLQCVSSGLQLYG
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggcggcgtgccggggatcctcgtccaaatggttcttcacccgggagcagctggagaac
acgccgtcccgccgctgtggagtcgagccggaccgggagctctcctaccgacagcaagcg
gccaacctcatccaggacatgggccagagactcaacgtctctcaattaacaataaataca
gccattgtttacatgcatagattttatatgcaccactctttcaccaaattccataggaat
ataatatctccaaccaccttattcttggccgcgaaagtggaagagcaaccgcggaaactc
gaacatgtgatcaaagtggcacacgcttgcctaaatccccaagaacaacccctagacaca
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaatccatagtgctg
cagaccctgggctttgaaattactattgatcacccacacactgatgtggtgaaatgttcc
cagctagtgcgagcaagcaaggatctggcacagacttcctatttcatggctaccaacagt
ctacacctcaccaccttctgcctccagtacaagcccacagtgatctcctgcgtgtgcatc
cacctggcgtgcaagtggtccaactgggaaatcccagtttccactgatgggaaacactgg
tgggagtacgtggacaactctgtcaccctcgagctgcttgatgagttgacccacgagttt
ctgcagattctggagaagacgcccagccggttaaagaggatacgcaactggagggcaaca
caagctgccaaaaagcccaagggcgacagctctcagttgaacgacaactcgtttcccggg
ccttccatgcttcaagatcacggcgatgcaccactcaactcaagtttctccaaagcgggc
ggcgctttccccgtggccatgcctggccagtccggaggcggtgccctttccctggacgcc
ttggttgggacttataacccagctagccacagtgagtggcccctgagcaaccagagccaa
gcagggtatccttccacctgtataaaagaggagcccctcaacatccctctccaagagccc
acgctgtccctgcagacctccgcttcctctctggcttacaggactgacaaaacgctagac
ttcatccctgtcaaacaggaacaaaaaggagctggtgggagtggttcggggaagcatcag
cagccacctcagtccacctaccccccgccagctcagcctcctccaccgcaaccgtctcca
gctcagaagctgtctctggacaaatacagagagaaacatgctgcggagctggcagtctct
gggcagaaacgcagtcaggaacagcatgggggaataatggattgtgatatgaggggggat
atgttattttcctcctcttctacctatgcatcatccttttctgcgagccaaggagaccat
agaaagcattcgcagccccaccaagcatcccatggtggtggtgggagcaccaccgcctcc
ccgatgaaaatcaaagtcccctcctcctcggcgtcagggcaagatagacgtcaccacagt
gacaaacgggacaaaggctccctcaaactccgcctggccgtccctgggtctggtggcagc
tcccagctggatagaagtggacaaccaatcaaagatgagcttaagatgaagataaaagtc
tcatcgtcggagcgccacagctcatcagatgaaggcgtggcggccaacaacatcaagagc
aaacattccagccctctggtgatcaaggagaaacaacaccgtggagcagatcaaagcctc
caccgccaccacaagcacagtcacacacatccacacacgcacagcgggaacggtggagca
ggcctgctacggggtcccccagggctggtcggcatggaaggcatggcgctccctccgccc
ggatccacctctttatcgtcatcgcgcaagagggtgtaccccgaggccggccacaaccac
cacccttcctcctcattctccacctcatgctccaaagtgagcaaaatctccaagggtggc
actggtgctgcaggtactacatctttttctctccccttttctcctcctcgctcctctcct
gtactgcagtgtgtctcgtctggcttgcagctctatggctaa

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