Anoplopoma fimbria (sablefish): 129104624
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Entry
129104624 CDS
T09102
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129104624 (stxbp5l)
Membrane trafficking [BR:
afb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129104624 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
129104624 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Lgl_C
Synaptobrevin
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_VPS8
GUB_WAK_bind
VPS8_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
129104624
NCBI-ProteinID:
XP_054471376
LinkDB
All DBs
Position
16:18151897..18270225
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AA seq
1181 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTIGSPSCGSAAGTPTNASTPKEMDIQETLVSENFQLCKTVRH
GFPYQPTALAFDPVQKILAIGSRTGGIRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELCTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVQWDLRGKKADFRI
YYDEAIHSVGWHHEGKQFMCSHSDGSLSMWNLRNTTKPFQVTFPHGKIQKDGRKESCKPI
LKVEYKTSRNSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFMALCETPY
NNEVQEPYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDIHESPVTCTAYFADCPPDIIPI
LYSIGAKHKKTGYSQKEWPVAGGTWTLGSHTYPEIIVTGHADGSIKFWDASAITLQMLYK
LKTSKAFEKPKPGEGRAAELVEEDPFAVQMVSWCPQSRIFCVVGISAHIILYRFSKYDAN
TQIVSLEVRLQCETEDVITPSENENNPCFTESSPHSPQPHHQHPASPGGVTPEGNKDSIP
YIKVKDRMVRVPPGYQAELVIQLLWVDGEPPQQITSLDINSAYGLLAFGNCNGLAVVDYL
QKTILLCMSTLDLYGAADPYQRLTRSPRRNRQSTSGSFCMRGLSNFYSDSKKRIRTSYQS
LTELSDNQQSIDMERSKSPTSDHVNGHCTSPTSQPSAGKPRVPMGPEGPRLTRRGPGRPP
FRKAQSAACMEISLPVSHTEESRENSFSRSRSSSVSSIDRDTKEAITTLQFGESYGRKND
ALPTPCLWVGTSLGVVLLIPMSIPTDHEERMEEPVAIGPSGTALMLKGSVLRISFLDFMG
QLIQSPHEVWRDLNAPEDPDRPRRRKLVHFSPSSSQDNCGEGHLAVVCSEKQAKVISMPS
QSCLFVHNITESSFVLRADVVSVSNSVCLACFCANGHVMTLSLPSLRPLMDVNYLPLTDM
RIARTFCFTNGGQALYLSSPTEIQRITYSQEMCDNLQEMLGELFTPIETPEAQNRGFLKG
FFGGNSHNFDREELFGEAAAGKGSRSLAQHIPGQAGMEGMKVAASGVVGDLARARIALDE
RGQRLGELEDRTALMMTSAETFSKHAHELMLKCKDKKWYQF
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtattggacggcttgaccacctcctctccgggagggactatc
ggatccccatcgtgcggcagcgcggccgggactcccacaaatgcgtccactcccaaggag
atggacatccaggagacgctggtgtcggaaaactttcagctgtgtaagactgtacgtcat
ggttttccttaccagcccactgctttggcctttgaccccgtgcagaagatcctggccatt
ggctccagaacaggcggcatacggatactgggacgacccggggtggactgctactgtcag
catgagagcggagcagctgttcttcagcttcagttcctcatcaatgagggggcgctggtc
acagcctgtgcagacgacacacttcacttgtggaatctccgtcagaggcgaccggctgtc
ctccattcacttaaattcaatagagagaggatcacgttctgccaccttccctttcagagc
aaatggctgtatgtggggacagagcgtggaaacacacacatcgtcaacatcgagtccttc
gttttgtctggatacgtcatcatgtggaacaaggccatagaactatgtactaaaactcat
ccaggacctgtggttcatttgagtgacagcccaaaggatgaaggcaagctgcttataggg
tttgaaagcgggacaatcgtacaatgggacctccggggcaagaaggccgacttcagaatc
tactacgatgaggccatccattcagtcggctggcatcatgaagggaagcagttcatgtgc
agtcactcagacggcagcctgtcgatgtggaacctcagaaacaccaccaagccattccag
gtcaccttccctcatggaaagatacagaaggatgggagaaaggagtcatgtaaacccata
ctcaaagtggagtacaagacctccaggaacagcgagccttttgttatcttctctgggggt
ctttcatatgacaaggcagggcggcggccaacgttaaccatcatgcacggcaaggccatc
actgtgctggagatggactaccctatcgtagagttcatggcactctgcgagactccatac
aacaacgaggtccaggagccttacgcagtggtggtgcttttggagaaggacttaatcgtg
gtggatctgacacagagcaacttccctgtctttgagaatccttacccaatggacatccat
gagtctccagttacctgcacagcctattttgcagactgtccgcccgacattatccccatc
ctctactcgataggagctaaacacaagaagactggctacagccaaaaggagtggccagtt
gccggaggaacgtggacgttaggctcccacacctacccagagatcatcgtcacaggacat
gctgacggatcaattaagttttgggatgcatctgcaatcacactacagatgttgtacaag
ctgaaaacctccaaagcctttgagaagccaaagccaggtgagggcagggcggccgagttg
gtggaggaagacccctttgcagttcaaatggtcagctggtgcccccagagtcgcatcttc
tgtgtggttggcatctcagcccacatcatcctgtaccgcttcagcaaatacgatgccaac
acccagatagtgtcactagaggtgcgcctacaatgtgagacggaggatgtcatcactccg
tctgagaatgaaaacaatccctgcttcacggagtccagccctcactcaccccaaccccac
caccaacacccagccagccccggtggtgtcacgcctgagggtaacaaagacagcatcccc
tacattaaggtgaaggaccggatggttcgggtccctcctggctaccaggcagagctggtc
atccagctgctgtgggtagatggagaacctccacaacagatcaccagcctggacatcaac
tctgcctatggccttttggcgtttggcaactgtaatggcctagcagtggtggactacttg
cagaaaaccatcctgttgtgtatgtcgacactggatctgtacggagccgccgacccgtac
caacgccttacccgctcgccccgcaggaaccgacagtccacctcaggtagcttttgcatg
cgcggcctgtctaacttttattcagattcaaagaaaaggatccgtacatcctatcagagc
cttactgaactctctgacaaccagcagtccattgacatggagagaagcaagtcgcccacc
tcagatcatgtcaatggacattgcactagtcccacctcccagccctcagcagggaagcct
cgcgtcccgatgggtcccgaggggccacggcttacccgcagaggccctggccgaccgccc
ttccgcaaggcccagtccgctgcttgcatggagatctctttgcctgtgtcccacactgaa
gagagccgcgaaaactccttcagccgctcacgcagttccagcgtttccagcatcgacagg
gacaccaaggaggcgatcaccaccctgcagtttggagagtcctacgggcgcaagaatgac
gccctgcccaccccgtgtctatgggtgggcaccagcttaggcgtggtccttctcattcca
atgtccattcccaccgaccacgaggagaggatggaggaacctgtggctattggccccagc
ggcacggcccttatgctgaagggctcagtattacgcattagcttcttggactttatgggg
cagctcattcagagcccccacgaggtttggcgggacctcaacgcccccgaggaccctgac
cgaccgcggaggcgtaagctggtccacttctcaccatcatcctcccaggacaactgcgga
gagggacatctggctgtggtgtgctccgagaagcaggccaaagtaatatccatgccgtca
cagtcttgcctctttgtccacaacatcaccgagtcgtcctttgtgctgcgagccgacgtg
gtatctgtgagcaacagtgtgtgcctggcctgcttctgtgctaacggacacgttatgacc
ctcagtttgcccagtctaagacccctgatggatgtcaattacctgcctctgacagacatg
cgcatcgcaagaaccttttgcttcaccaacggggggcaggcactttatctcagctccccg
acggagatccagagaattacatacagccaggagatgtgtgacaacctgcaggagatgctc
ggggagctgtttacaccaatagaaacaccggaagcccagaacagaggcttcctaaagggc
ttctttggaggaaattcccataacttcgacagagaggagctctttggagaggcagcagct
gggaagggttctcggagtctagcccagcacatccctgggcaggcggggatggagggcatg
aaggtggcagctagcggagtcgtgggtgacctggcacgggcccgcatcgctctggatgag
agaggccaaaggcttggggagctggaggatcgaaccgcactgatgatgaccagtgcagaa
accttctccaaacacgctcacgagctgatgctaaagtgcaaggacaagaagtggtaccag
ttctaa
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